RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 C8orf58Q8NAV2 365 aa19.72■□□□□ 0.75
CHMP1A-201ENST00000397901 NASPP49321 788 aaPredicted RBP19.71■□□□□ 0.75
CHMP1A-201ENST00000397901 GAS2L2Q8NHY3 880 aa19.71■□□□□ 0.75
CHMP1A-201ENST00000397901 SSFA2P28290 1259 aa19.71■□□□□ 0.75
CHMP1A-201ENST00000397901 ZRANB1Q9UGI0 708 aa19.71■□□□□ 0.75
CHMP1A-201ENST00000397901 EDC4Q6P2E9 1401 aaKnown RBP19.71■□□□□ 0.75
CHMP1A-201ENST00000397901 CDC45O75419 566 aa19.7■□□□□ 0.74
CHMP1A-201ENST00000397901 R3HCC1Q9Y3T6 440 aaKnown RBP19.7■□□□□ 0.74
CHMP1A-201ENST00000397901 FAM83GA6ND36 823 aa19.7■□□□□ 0.74
CHMP1A-201ENST00000397901 HS1BP3Q53T59 392 aa19.7■□□□□ 0.74
CHMP1A-201ENST00000397901 ZNF853P0CG23 659 aa19.69■□□□□ 0.74
CHMP1A-201ENST00000397901 GSPT1P15170 499 aaKnown RBP19.69■□□□□ 0.74
CHMP1A-201ENST00000397901 IL13P35225 146 aa19.69■□□□□ 0.74
CHMP1A-201ENST00000397901 NME9Q86XW9 330 aa19.69■□□□□ 0.74
CHMP1A-201ENST00000397901 MON2Q7Z3U7 1717 aa19.69■□□□□ 0.74
CHMP1A-201ENST00000397901 MAP2P11137 1827 aaKnown RBP19.69■□□□□ 0.74
CHMP1A-201ENST00000397901 DCTN1Q14203 1278 aa19.68■□□□□ 0.74
CHMP1A-201ENST00000397901 NUDT16Q96DE0 195 aaKnown RBP19.68■□□□□ 0.74
CHMP1A-201ENST00000397901 PLEKHG1Q9ULL1 1385 aa19.68■□□□□ 0.74
CHMP1A-201ENST00000397901 ROBO2Q9HCK4 1378 aa19.68■□□□□ 0.74
CHMP1A-201ENST00000397901 LTKP29376 864 aa19.67■□□□□ 0.74
CHMP1A-201ENST00000397901 UTP14CQ5TAP6 766 aaKnown RBP19.67■□□□□ 0.74
CHMP1A-201ENST00000397901 AKAP12Q02952 1782 aa19.67■□□□□ 0.74
CHMP1A-201ENST00000397901 C3P01024 1663 aa19.67■□□□□ 0.74
CHMP1A-201ENST00000397901 DYNC1I1O14576 645 aa19.67■□□□□ 0.74
CHMP1A-201ENST00000397901 API5Q9BZZ5 524 aaKnown RBP19.67■□□□□ 0.74
CHMP1A-201ENST00000397901 UQCRHLA0A096LP55 91 aa19.66■□□□□ 0.74
CHMP1A-201ENST00000397901 ZNF500O60304 480 aaPredicted RBP19.66■□□□□ 0.74
CHMP1A-201ENST00000397901 UQCRHP07919 91 aa19.66■□□□□ 0.74
CHMP1A-201ENST00000397901 CFAP44Q96MT7 982 aa19.66■□□□□ 0.74
CHMP1A-201ENST00000397901 CEBPAP49715 358 aaPredicted RBP19.66■□□□□ 0.74
CHMP1A-201ENST00000397901 RRS1Q15050 365 aaKnown RBP19.66■□□□□ 0.74
CHMP1A-201ENST00000397901 PLEKHM2Q8IWE5 1019 aa19.66■□□□□ 0.74
CHMP1A-201ENST00000397901 CCDC61Q9Y6R9 512 aa19.66■□□□□ 0.74
CHMP1A-201ENST00000397901 IBTKQ9P2D0 1353 aaPredicted RBP19.66■□□□□ 0.74
CHMP1A-201ENST00000397901 C16orf71Q8IYS4 520 aaPredicted RBP19.65■□□□□ 0.74
CHMP1A-201ENST00000397901 NCKAP5LQ9HCH0 1330 aa19.65■□□□□ 0.74
CHMP1A-201ENST00000397901 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.64■□□□□ 0.74
CHMP1A-201ENST00000397901 ITSN1Q15811 1721 aa19.64■□□□□ 0.73
CHMP1A-201ENST00000397901 PRR36Q9H6K5 1346 aa19.64■□□□□ 0.73
CHMP1A-201ENST00000397901 LMOD3Q0VAK6 560 aa19.63■□□□□ 0.73
CHMP1A-201ENST00000397901 NOL7Q9UMY1 257 aaKnown RBP19.63■□□□□ 0.73
CHMP1A-201ENST00000397901 SLIT1O75093 1534 aa19.62■□□□□ 0.73
CHMP1A-201ENST00000397901 GOLGA6L22H0YM25 854 aa19.62■□□□□ 0.73
CHMP1A-201ENST00000397901 APBB1O00213 710 aa19.62■□□□□ 0.73
CHMP1A-201ENST00000397901 DMTNQ08495 405 aa19.62■□□□□ 0.73
CHMP1A-201ENST00000397901 CSPP1Q1MSJ5 1256 aa19.62■□□□□ 0.73
CHMP1A-201ENST00000397901 OTUD7AQ8TE49 926 aaPredicted RBP19.62■□□□□ 0.73
CHMP1A-201ENST00000397901 ARHGAP23Q9P227 1491 aa19.62■□□□□ 0.73
CHMP1A-201ENST00000397901 BAG4O95429 457 aaKnown RBP19.62■□□□□ 0.73
CHMP1A-201ENST00000397901 TTC22Q5TAA0 569 aa19.62■□□□□ 0.73
CHMP1A-201ENST00000397901 DCTPP1Q9H773 170 aa19.62■□□□□ 0.73
CHMP1A-201ENST00000397901 FER1L4A9Z1Z3 1794 aa19.62■□□□□ 0.73
CHMP1A-201ENST00000397901 AATKQ6ZMQ8 1374 aa19.61■□□□□ 0.73
CHMP1A-201ENST00000397901 KRT24Q2M2I5 525 aa19.61■□□□□ 0.73
CHMP1A-201ENST00000397901 DDX49Q9Y6V7 483 aaKnown RBP19.61■□□□□ 0.73
CHMP1A-201ENST00000397901 NCLP19338 710 aaKnown RBP19.61■□□□□ 0.73
CHMP1A-201ENST00000397901 CDK12Q9NYV4 1490 aaPredicted RBP19.61■□□□□ 0.73
CHMP1A-201ENST00000397901 PTPRUQ92729 1446 aa19.6■□□□□ 0.73
CHMP1A-201ENST00000397901 TOPAZ1Q8N9V7 1692 aa19.6■□□□□ 0.73
CHMP1A-201ENST00000397901 AK9Q5TCS8 1911 aa19.6■□□□□ 0.73
CHMP1A-201ENST00000397901 RABEP1Q15276 862 aa19.6■□□□□ 0.73
CHMP1A-201ENST00000397901 ZHX1Q9UKY1 873 aaPredicted RBP19.6■□□□□ 0.73
CHMP1A-201ENST00000397901 DLG5Q8TDM6 1919 aa19.6■□□□□ 0.73
CHMP1A-201ENST00000397901 COG3Q96JB2 828 aa19.6■□□□□ 0.73
CHMP1A-201ENST00000397901 SMARCA5O60264 1052 aaPredicted RBP19.59■□□□□ 0.73
CHMP1A-201ENST00000397901 CCDC94Q9BW85 323 aaPredicted RBP19.58■□□□□ 0.73
CHMP1A-201ENST00000397901 MCTP1Q6DN14 999 aa19.58■□□□□ 0.72
CHMP1A-201ENST00000397901 AEBP1Q8IUX7 1158 aa19.58■□□□□ 0.72
CHMP1A-201ENST00000397901 USP26Q9BXU7 913 aa19.58■□□□□ 0.72
CHMP1A-201ENST00000397901 NRKQ7Z2Y5 1582 aa19.58■□□□□ 0.72
CHMP1A-201ENST00000397901 KLHL40Q2TBA0 621 aa19.57■□□□□ 0.72
CHMP1A-201ENST00000397901 ANKRD44Q8N8A2 993 aa19.57■□□□□ 0.72
CHMP1A-201ENST00000397901 INTS3Q68E01 1043 aaKnown RBP19.57■□□□□ 0.72
CHMP1A-201ENST00000397901 PRDM10Q9NQV6 1147 aa19.57■□□□□ 0.72
CHMP1A-201ENST00000397901 EID1Q9Y6B2 187 aa19.57■□□□□ 0.72
CHMP1A-201ENST00000397901 MCM5P33992 734 aa19.56■□□□□ 0.72
CHMP1A-201ENST00000397901 PDE4CQ08493 712 aa19.56■□□□□ 0.72
CHMP1A-201ENST00000397901 PKP1Q13835 747 aa19.56■□□□□ 0.72
CHMP1A-201ENST00000397901 SASS6Q6UVJ0 657 aa19.56■□□□□ 0.72
CHMP1A-201ENST00000397901 SDSP20132 328 aa19.56■□□□□ 0.72
CHMP1A-201ENST00000397901 XPCQ01831 940 aaPredicted RBP19.56■□□□□ 0.72
CHMP1A-201ENST00000397901 CLEC17AQ6ZS10 378 aa19.56■□□□□ 0.72
CHMP1A-201ENST00000397901 SLC26A8Q96RN1 970 aa19.56■□□□□ 0.72
CHMP1A-201ENST00000397901 ATP10DQ9P241 1426 aa19.55■□□□□ 0.72
CHMP1A-201ENST00000397901 KIF24Q5T7B8 1368 aa19.55■□□□□ 0.72
CHMP1A-201ENST00000397901 CEP85Q6P2H3 762 aa19.55■□□□□ 0.72
CHMP1A-201ENST00000397901 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.55■□□□□ 0.72
CHMP1A-201ENST00000397901 ZNF445P59923 1031 aa19.54■□□□□ 0.72
CHMP1A-201ENST00000397901 PDLIM2Q96JY6 352 aa19.54■□□□□ 0.72
CHMP1A-201ENST00000397901 MSH6P52701 1360 aa19.54■□□□□ 0.72
CHMP1A-201ENST00000397901 MCM10Q7L590 875 aa19.54■□□□□ 0.72
CHMP1A-201ENST00000397901 SULT6B1Q6IMI4 303 aa19.53■□□□□ 0.72
CHMP1A-201ENST00000397901 ZKSCAN5Q9Y2L8 839 aa19.53■□□□□ 0.72
CHMP1A-201ENST00000397901 PLEKHG3A1L390 1219 aa19.53■□□□□ 0.72
CHMP1A-201ENST00000397901 MEIS3Q99687 375 aa19.53■□□□□ 0.72
CHMP1A-201ENST00000397901 TBX22Q9Y458 520 aa19.53■□□□□ 0.72
CHMP1A-201ENST00000397901 RGS12O14924 1447 aa19.52■□□□□ 0.72
CHMP1A-201ENST00000397901 ZSCAN20P17040 1043 aaPredicted RBP19.52■□□□□ 0.72
CHMP1A-201ENST00000397901 NUCB2P80303 420 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms