RNA–Protein interactions for RNA: ENST00000397763.5

COL6A2-203, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,101 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-203ENST00000397763 SLC4A2P04920 1241 aa16.91■□□□□ 0.3
COL6A2-203ENST00000397763 CEP85Q6P2H3 762 aa16.91■□□□□ 0.3
COL6A2-203ENST00000397763 LMBRD1Q9NUN5 540 aa16.91■□□□□ 0.3
COL6A2-203ENST00000397763 PIK3C2BO00750 1634 aa16.91■□□□□ 0.3
COL6A2-203ENST00000397763 PTCH1Q13635 1447 aa16.9■□□□□ 0.3
COL6A2-203ENST00000397763 MSH6P52701 1360 aa16.9■□□□□ 0.3
COL6A2-203ENST00000397763 INTS3Q68E01 1043 aaKnown RBP16.9■□□□□ 0.3
COL6A2-203ENST00000397763 GPT2Q8TD30 523 aa16.9■□□□□ 0.3
COL6A2-203ENST00000397763 CHMP4BQ9H444 224 aaKnown RBP16.9■□□□□ 0.3
COL6A2-203ENST00000397763 ZDHHC9Q9Y397 364 aa16.9■□□□□ 0.3
COL6A2-203ENST00000397763 BRPF1P55201 1214 aaPredicted RBP16.9■□□□□ 0.3
COL6A2-203ENST00000397763 XPCQ01831 940 aaPredicted RBP16.9■□□□□ 0.3
COL6A2-203ENST00000397763 ZNF428Q96B54 188 aa16.9■□□□□ 0.3
COL6A2-203ENST00000397763 MLH3Q9UHC1 1453 aa16.89■□□□□ 0.29
COL6A2-203ENST00000397763 SYCE3A1L190 88 aa16.89■□□□□ 0.29
COL6A2-203ENST00000397763 NEK4P51957 841 aa16.89■□□□□ 0.29
COL6A2-203ENST00000397763 GDPD2Q9HCC8 539 aa16.89■□□□□ 0.29
COL6A2-203ENST00000397763 ANKRD44Q8N8A2 993 aa16.89■□□□□ 0.29
COL6A2-203ENST00000397763 NUDT16Q96DE0 195 aaKnown RBP16.89■□□□□ 0.29
COL6A2-203ENST00000397763 TPM2P07951 284 aa16.88■□□□□ 0.29
COL6A2-203ENST00000397763 HSP90AB2PQ58FF8 381 aa16.88■□□□□ 0.29
COL6A2-203ENST00000397763 CCDC173Q0VFZ6 552 aa16.88■□□□□ 0.29
COL6A2-203ENST00000397763 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.88■□□□□ 0.29
COL6A2-203ENST00000397763 MAP2P11137 1827 aaKnown RBP16.88■□□□□ 0.29
COL6A2-203ENST00000397763 RIMS2Q9UQ26 1411 aa16.88■□□□□ 0.29
COL6A2-203ENST00000397763 ZSCAN30Q86W11 494 aa16.87■□□□□ 0.29
COL6A2-203ENST00000397763 LARP6Q9BRS8 491 aaKnown RBP16.87■□□□□ 0.29
COL6A2-203ENST00000397763 ISY1Q9ULR0 285 aaKnown RBP16.87■□□□□ 0.29
COL6A2-203ENST00000397763 RILPL2Q969X0 211 aa16.87■□□□□ 0.29
COL6A2-203ENST00000397763 PIK3R4Q99570 1358 aa16.87■□□□□ 0.29
COL6A2-203ENST00000397763 EIF4A2Q14240 407 aaKnown RBP16.86■□□□□ 0.29
COL6A2-203ENST00000397763 UPF3BQ9BZI7 483 aaKnown RBP16.86■□□□□ 0.29
COL6A2-203ENST00000397763 ARHGEF40Q8TER5 1519 aa16.86■□□□□ 0.29
COL6A2-203ENST00000397763 WASLO00401 505 aaPredicted RBP16.86■□□□□ 0.29
COL6A2-203ENST00000397763 ST18O60284 1047 aa16.86■□□□□ 0.29
COL6A2-203ENST00000397763 PLPPR3Q6T4P5 718 aa16.86■□□□□ 0.29
COL6A2-203ENST00000397763 TMEM63CQ9P1W3 806 aa16.86■□□□□ 0.29
COL6A2-203ENST00000397763 ZFYVE9O95405 1425 aa16.86■□□□□ 0.29
COL6A2-203ENST00000397763 NUCB2P80303 420 aa16.85■□□□□ 0.29
COL6A2-203ENST00000397763 PALD1Q9ULE6 856 aa16.85■□□□□ 0.29
COL6A2-203ENST00000397763 TRIM6-TRIM34B2RNG4 842 aa16.85■□□□□ 0.29
COL6A2-203ENST00000397763 MAP4K4O95819 1239 aaPredicted RBP16.85■□□□□ 0.29
COL6A2-203ENST00000397763 PDCL3Q9H2J4 239 aa16.85■□□□□ 0.29
COL6A2-203ENST00000397763 KNDC1Q76NI1 1749 aa16.85■□□□□ 0.29
COL6A2-203ENST00000397763 LMOD3Q0VAK6 560 aa16.84■□□□□ 0.29
COL6A2-203ENST00000397763 CASC1Q6TDU7 716 aa16.84■□□□□ 0.29
COL6A2-203ENST00000397763 PPP1R9BQ96SB3 815 aa16.83■□□□□ 0.29
COL6A2-203ENST00000397763 RTL1A6NKG5 1358 aa16.83■□□□□ 0.29
COL6A2-203ENST00000397763 ANO2Q9NQ90 1003 aa16.83■□□□□ 0.28
COL6A2-203ENST00000397763 ATP10DQ9P241 1426 aa16.83■□□□□ 0.28
COL6A2-203ENST00000397763 CYP2E1P05181 493 aaPredicted RBP16.82■□□□□ 0.28
COL6A2-203ENST00000397763 ERC2O15083 957 aa16.82■□□□□ 0.28
COL6A2-203ENST00000397763 TMX3Q96JJ7 454 aa16.82■□□□□ 0.28
COL6A2-203ENST00000397763 ALKQ9UM73 1620 aa16.82■□□□□ 0.28
COL6A2-203ENST00000397763 PDE1AP54750 535 aa16.81■□□□□ 0.28
COL6A2-203ENST00000397763 RPAP2Q8IXW5 612 aaPredicted RBP16.81■□□□□ 0.28
COL6A2-203ENST00000397763 IL1RAPL2Q9NP60 686 aa16.81■□□□□ 0.28
COL6A2-203ENST00000397763 PODXL2Q9NZ53 605 aa16.81■□□□□ 0.28
COL6A2-203ENST00000397763 PTMSP20962 102 aa16.81■□□□□ 0.28
COL6A2-203ENST00000397763 CPS1P31327 1500 aa16.8■□□□□ 0.28
COL6A2-203ENST00000397763 METP08581 1390 aa16.8■□□□□ 0.28
COL6A2-203ENST00000397763 REC8O95072 547 aa16.8■□□□□ 0.28
COL6A2-203ENST00000397763 UNC5CLQ8IV45 518 aa16.8■□□□□ 0.28
COL6A2-203ENST00000397763 TSPYL4Q9UJ04 414 aa16.8■□□□□ 0.28
COL6A2-203ENST00000397763 CCDC61Q9Y6R9 512 aa16.8■□□□□ 0.28
COL6A2-203ENST00000397763 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.8■□□□□ 0.28
COL6A2-203ENST00000397763 PNMA6EA0A0J9YXQ4 647 aa16.79■□□□□ 0.28
COL6A2-203ENST00000397763 CHL1O00533 1208 aa16.79■□□□□ 0.28
COL6A2-203ENST00000397763 ZNF445P59923 1031 aa16.79■□□□□ 0.28
COL6A2-203ENST00000397763 OFD1O75665 1012 aa16.79■□□□□ 0.28
COL6A2-203ENST00000397763 PRR36Q9H6K5 1346 aa16.79■□□□□ 0.28
COL6A2-203ENST00000397763 NUTM2GQ5VZR2 741 aa16.79■□□□□ 0.28
COL6A2-203ENST00000397763 IL25Q9H293 177 aa16.79■□□□□ 0.28
COL6A2-203ENST00000397763 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.79■□□□□ 0.28
COL6A2-203ENST00000397763 RGS12O14924 1447 aa16.78■□□□□ 0.28
COL6A2-203ENST00000397763 UQCRHLA0A096LP55 91 aa16.78■□□□□ 0.28
COL6A2-203ENST00000397763 UQCRHP07919 91 aa16.78■□□□□ 0.28
COL6A2-203ENST00000397763 GADD45BO75293 160 aaPredicted RBP16.78■□□□□ 0.28
COL6A2-203ENST00000397763 CLEC17AQ6ZS10 378 aa16.78■□□□□ 0.28
COL6A2-203ENST00000397763 OSCARQ8IYS5 282 aa16.78■□□□□ 0.28
COL6A2-203ENST00000397763 JARID2Q92833 1246 aaPredicted RBP16.78■□□□□ 0.28
COL6A2-203ENST00000397763 DIP2CQ9Y2E4 1556 aa16.78■□□□□ 0.28
COL6A2-203ENST00000397763 ZNF830Q96NB3 372 aaPredicted RBP16.77■□□□□ 0.28
COL6A2-203ENST00000397763 PRDM10Q9NQV6 1147 aa16.77■□□□□ 0.28
COL6A2-203ENST00000397763 KIF20BQ96Q89 1820 aa16.77■□□□□ 0.27
COL6A2-203ENST00000397763 FKBP5Q13451 457 aaPredicted RBP16.77■□□□□ 0.27
COL6A2-203ENST00000397763 TMEM131LA2VDJ0 1609 aa16.77■□□□□ 0.27
COL6A2-203ENST00000397763 DLG5Q8TDM6 1919 aa16.77■□□□□ 0.27
COL6A2-203ENST00000397763 MTHFSDQ2M296 383 aaKnown RBP16.76■□□□□ 0.27
COL6A2-203ENST00000397763 NUTM1Q86Y26 1132 aa16.76■□□□□ 0.27
COL6A2-203ENST00000397763 ANKRD26Q9UPS8 1709 aa16.76■□□□□ 0.27
COL6A2-203ENST00000397763 LTV1Q96GA3 475 aaPredicted RBP16.76■□□□□ 0.27
COL6A2-203ENST00000397763 PTMAP06454 111 aaKnown RBP16.75■□□□□ 0.27
COL6A2-203ENST00000397763 CYB5RLQ6IPT4 315 aa16.75■□□□□ 0.27
COL6A2-203ENST00000397763 DDX54Q8TDD1 881 aaKnown RBP16.75■□□□□ 0.27
COL6A2-203ENST00000397763 RTF1Q92541 710 aaKnown RBP16.75■□□□□ 0.27
COL6A2-203ENST00000397763 CWC22Q9HCG8 908 aaKnown RBP16.75■□□□□ 0.27
COL6A2-203ENST00000397763 EDC4Q6P2E9 1401 aaKnown RBP16.75■□□□□ 0.27
COL6A2-203ENST00000397763 HMMRO75330 724 aa16.74■□□□□ 0.27
COL6A2-203ENST00000397763 PLCB2Q00722 1185 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms