RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 IFT140Q96RY7 1462 aa8.98□□□□□ -0.97
SMCO1-201ENST00000397537 TTLL13PA6NNM8 815 aa8.98□□□□□ -0.97
SMCO1-201ENST00000397537 ILDR2Q71H61 639 aa8.98□□□□□ -0.97
SMCO1-201ENST00000397537 FMNL3Q8IVF7 1028 aa8.98□□□□□ -0.97
SMCO1-201ENST00000397537 RGL4Q8IZJ4 473 aa8.98□□□□□ -0.97
SMCO1-201ENST00000397537 USP17L5A8MUK1 530 aa8.97□□□□□ -0.97
SMCO1-201ENST00000397537 KIF3CO14782 793 aa8.97□□□□□ -0.97
SMCO1-201ENST00000397537 S100BP04271 92 aaPredicted RBP8.97□□□□□ -0.97
SMCO1-201ENST00000397537 ARHGAP4P98171 946 aa8.97□□□□□ -0.97
SMCO1-201ENST00000397537 CLEC4GQ6UXB4 293 aa8.97□□□□□ -0.97
SMCO1-201ENST00000397537 PLEKHM2Q8IWE5 1019 aa8.97□□□□□ -0.97
SMCO1-201ENST00000397537 CCAR1Q8IX12 1150 aaKnown RBP8.97□□□□□ -0.97
SMCO1-201ENST00000397537 TIE1P35590 1138 aa8.96□□□□□ -0.97
SMCO1-201ENST00000397537 NFATC2IPQ8NCF5 419 aa8.96□□□□□ -0.97
SMCO1-201ENST00000397537 METTL5Q9NRN9 209 aaKnown RBP8.96□□□□□ -0.97
SMCO1-201ENST00000397537 BMP2KQ9NSY1 1161 aaPredicted RBP8.96□□□□□ -0.97
SMCO1-201ENST00000397537 MKRN1Q9UHC7 482 aaKnown RBP8.96□□□□□ -0.97
SMCO1-201ENST00000397537 EIF4G2P78344 907 aaKnown RBP eCLIP8.96□□□□□ -0.98
SMCO1-201ENST00000397537 GNL2Q13823 731 aaKnown RBP8.96□□□□□ -0.98
SMCO1-201ENST00000397537 SLFNL1Q499Z3 407 aa8.96□□□□□ -0.98
SMCO1-201ENST00000397537 SOGA3Q5TF21 947 aa8.96□□□□□ -0.98
SMCO1-201ENST00000397537 MICALL2Q8IY33 904 aa8.96□□□□□ -0.98
SMCO1-201ENST00000397537 RASA1P20936 1047 aa8.95□□□□□ -0.98
SMCO1-201ENST00000397537 BIRC2Q13490 618 aa8.95□□□□□ -0.98
SMCO1-201ENST00000397537 SWI5Q1ZZU3 235 aa8.95□□□□□ -0.98
SMCO1-201ENST00000397537 PADI6Q6TGC4 694 aa8.95□□□□□ -0.98
SMCO1-201ENST00000397537 C11orf96Q7Z7L8 435 aa8.95□□□□□ -0.98
SMCO1-201ENST00000397537 RPS6KC1Q96S38 1066 aa8.95□□□□□ -0.98
SMCO1-201ENST00000397537 ZBTB3Q9H5J0 574 aa8.95□□□□□ -0.98
SMCO1-201ENST00000397537 HECW2Q9P2P5 1572 aa8.95□□□□□ -0.98
SMCO1-201ENST00000397537 C21orf2O43822 256 aa8.94□□□□□ -0.98
SMCO1-201ENST00000397537 SKIP12755 728 aa8.94□□□□□ -0.98
SMCO1-201ENST00000397537 TAS1R3Q7RTX0 852 aa8.94□□□□□ -0.98
SMCO1-201ENST00000397537 ANKMY2Q8IV38 441 aa8.94□□□□□ -0.98
SMCO1-201ENST00000397537 RNF19AQ9NV58 838 aa8.94□□□□□ -0.98
SMCO1-201ENST00000397537 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.94□□□□□ -0.98
SMCO1-201ENST00000397537 ARID5AQ03989 594 aa8.94□□□□□ -0.98
SMCO1-201ENST00000397537 LARP1Q6PKG0 1096 aaKnown RBP8.94□□□□□ -0.98
SMCO1-201ENST00000397537 FAM43BQ6ZT52 329 aaPredicted RBP8.94□□□□□ -0.98
SMCO1-201ENST00000397537 RBM33Q96EV2 1170 aaKnown RBP8.94□□□□□ -0.98
SMCO1-201ENST00000397537 GNL3LQ9NVN8 582 aaKnown RBP8.94□□□□□ -0.98
SMCO1-201ENST00000397537 EIF4G3O43432 1585 aaKnown RBP8.93□□□□□ -0.98
SMCO1-201ENST00000397537 DNAJC6O75061 913 aa8.93□□□□□ -0.98
SMCO1-201ENST00000397537 MAMSTRQ6ZN01 415 aa8.93□□□□□ -0.98
SMCO1-201ENST00000397537 SPC25Q9HBM1 224 aa8.93□□□□□ -0.98
SMCO1-201ENST00000397537 CLASP1Q7Z460 1538 aa8.93□□□□□ -0.98
SMCO1-201ENST00000397537 XRCC5P13010 732 aaKnown RBP8.92□□□□□ -0.98
SMCO1-201ENST00000397537 FAM174AQ8TBP5 190 aa8.92□□□□□ -0.98
SMCO1-201ENST00000397537 JDP2Q8WYK2 163 aa8.92□□□□□ -0.98
SMCO1-201ENST00000397537 TSC1Q92574 1164 aa8.92□□□□□ -0.98
SMCO1-201ENST00000397537 TRIM35Q9UPQ4 493 aa8.92□□□□□ -0.98
SMCO1-201ENST00000397537 ENPP3O14638 875 aa8.91□□□□□ -0.98
SMCO1-201ENST00000397537 ZNF76P36508 570 aa8.91□□□□□ -0.98
SMCO1-201ENST00000397537 AMPD3Q01432 767 aa8.91□□□□□ -0.98
SMCO1-201ENST00000397537 KRBA2Q6ZNG9 492 aa8.91□□□□□ -0.98
SMCO1-201ENST00000397537 PARP2Q9UGN5 583 aa8.91□□□□□ -0.98
SMCO1-201ENST00000397537 PRMT3O60678 531 aa8.91□□□□□ -0.98
SMCO1-201ENST00000397537 EVA1CP58658 441 aa8.91□□□□□ -0.98
SMCO1-201ENST00000397537 DPYDQ12882 1025 aa8.91□□□□□ -0.98
SMCO1-201ENST00000397537 DPY19L2Q6NUT2 758 aa8.91□□□□□ -0.98
SMCO1-201ENST00000397537 MCF2L2Q86YR7 1114 aa8.91□□□□□ -0.98
SMCO1-201ENST00000397537 MTA3Q9BTC8 594 aa8.91□□□□□ -0.98
SMCO1-201ENST00000397537 PRC1O43663 620 aa8.9□□□□□ -0.98
SMCO1-201ENST00000397537 MTMR3Q13615 1198 aa8.9□□□□□ -0.98
SMCO1-201ENST00000397537 OCLNQ16625 522 aa8.9□□□□□ -0.98
SMCO1-201ENST00000397537 XPCQ01831 940 aaPredicted RBP8.89□□□□□ -0.99
SMCO1-201ENST00000397537 GRIPAP1Q4V328 841 aa8.89□□□□□ -0.99
SMCO1-201ENST00000397537 DNMT3AQ9Y6K1 912 aaPredicted RBP8.89□□□□□ -0.99
SMCO1-201ENST00000397537 KIF13AQ9H1H9 1805 aa8.89□□□□□ -0.99
SMCO1-201ENST00000397537 CFTRP13569 1480 aa8.89□□□□□ -0.99
SMCO1-201ENST00000397537 GAPVD1Q14C86 1478 aa8.89□□□□□ -0.99
SMCO1-201ENST00000397537 WDHD1O75717 1129 aaPredicted RBP8.89□□□□□ -0.99
SMCO1-201ENST00000397537 PDGFRBP09619 1106 aa8.89□□□□□ -0.99
SMCO1-201ENST00000397537 TMC7Q7Z402 723 aa8.89□□□□□ -0.99
SMCO1-201ENST00000397537 PNISRQ8TF01 805 aaKnown RBP8.89□□□□□ -0.99
SMCO1-201ENST00000397537 GTF3C2Q8WUA4 911 aaPredicted RBP8.89□□□□□ -0.99
SMCO1-201ENST00000397537 MRS2Q9HD23 443 aa8.89□□□□□ -0.99
SMCO1-201ENST00000397537 INPP5FQ9Y2H2 1132 aa8.89□□□□□ -0.99
SMCO1-201ENST00000397537 ATN1P54259 1190 aaPredicted RBP8.88□□□□□ -0.99
SMCO1-201ENST00000397537 NR6A1Q15406 480 aa8.88□□□□□ -0.99
SMCO1-201ENST00000397537 NFE2L2Q16236 605 aa8.88□□□□□ -0.99
SMCO1-201ENST00000397537 TMC4Q7Z404 712 aa8.88□□□□□ -0.99
SMCO1-201ENST00000397537 RNF135Q8IUD6 432 aa8.88□□□□□ -0.99
SMCO1-201ENST00000397537 TTC13Q8NBP0 860 aa8.88□□□□□ -0.99
SMCO1-201ENST00000397537 MRFAP1L1Q96HT8 127 aa8.88□□□□□ -0.99
SMCO1-201ENST00000397537 CXXC1Q9P0U4 656 aaPredicted RBP8.88□□□□□ -0.99
SMCO1-201ENST00000397537 TTF2Q9UNY4 1162 aaKnown RBP8.88□□□□□ -0.99
SMCO1-201ENST00000397537 CCDC189A1A4V9 331 aa8.87□□□□□ -0.99
SMCO1-201ENST00000397537 SORBS3O60504 671 aa8.87□□□□□ -0.99
SMCO1-201ENST00000397537 STK10O94804 968 aaKnown RBP8.87□□□□□ -0.99
SMCO1-201ENST00000397537 PHF14O94880 888 aa8.87□□□□□ -0.99
SMCO1-201ENST00000397537 PDE3BQ13370 1112 aa8.87□□□□□ -0.99
SMCO1-201ENST00000397537 NCOA4Q13772 614 aa8.87□□□□□ -0.99
SMCO1-201ENST00000397537 PNMA1Q8ND90 353 aa8.87□□□□□ -0.99
SMCO1-201ENST00000397537 HELBQ8NG08 1087 aaPredicted RBP8.87□□□□□ -0.99
SMCO1-201ENST00000397537 EPAS1Q99814 870 aa8.87□□□□□ -0.99
SMCO1-201ENST00000397537 DUSP9Q99956 384 aaKnown RBP8.87□□□□□ -0.99
SMCO1-201ENST00000397537 PCDHGC3Q9UN70 934 aa8.87□□□□□ -0.99
SMCO1-201ENST00000397537 AQRO60306 1485 aaKnown RBP eCLIP8.87□□□□□ -0.99
SMCO1-201ENST00000397537 ATP5J2-PTCD1G3V325 749 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms