RNA–Protein interactions for RNA: ENST00000397370.3

RBM39-205, Transcript of RNA binding motif protein 39, humanhuman

TSL 2 BASIC

Gene RBM39, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-205ENST00000397370 KDRP35968 1356 aa21.66■■□□□ 1.06
RBM39-205ENST00000397370 AEBP1Q8IUX7 1158 aa21.66■■□□□ 1.06
RBM39-205ENST00000397370 ZCRB1Q8TBF4 217 aaKnown RBP21.66■■□□□ 1.06
RBM39-205ENST00000397370 FAM196AQ6ZSG2 479 aa21.65■■□□□ 1.06
RBM39-205ENST00000397370 U2SURPO15042 1029 aaKnown RBP21.64■■□□□ 1.05
RBM39-205ENST00000397370 UPF1Q92900 1129 aaKnown RBP eCLIP21.64■■□□□ 1.05
RBM39-205ENST00000397370 HMOX1P09601 288 aa21.63■■□□□ 1.05
RBM39-205ENST00000397370 NUDCQ9Y266 331 aa21.63■■□□□ 1.05
RBM39-205ENST00000397370 SBF2Q86WG5 1849 aa21.63■■□□□ 1.05
RBM39-205ENST00000397370 DDX54Q8TDD1 881 aaKnown RBP21.62■■□□□ 1.05
RBM39-205ENST00000397370 EP400Q96L91 3159 aa21.62■■□□□ 1.05
RBM39-205ENST00000397370 PLEKHG2Q9H7P9 1386 aa21.61■■□□□ 1.05
RBM39-205ENST00000397370 ANP32CO43423 234 aa21.61■■□□□ 1.05
RBM39-205ENST00000397370 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.61■■□□□ 1.05
RBM39-205ENST00000397370 SPG7Q9UQ90 795 aa21.61■■□□□ 1.05
RBM39-205ENST00000397370 BCL9O00512 1426 aa21.61■■□□□ 1.05
RBM39-205ENST00000397370 KAT6BQ8WYB5 2073 aa21.6■■□□□ 1.05
RBM39-205ENST00000397370 PCDH11XQ9BZA7 1347 aa21.59■■□□□ 1.05
RBM39-205ENST00000397370 PCDH11YQ9BZA8 1340 aa21.59■■□□□ 1.05
RBM39-205ENST00000397370 PLEKHO1Q53GL0 409 aaPredicted RBP21.58■■□□□ 1.05
RBM39-205ENST00000397370 CYP27B1O15528 508 aa21.57■■□□□ 1.04
RBM39-205ENST00000397370 U2AF1L5P0DN76 240 aaPredicted RBP21.57■■□□□ 1.04
RBM39-205ENST00000397370 U2AF1Q01081 240 aaKnown RBP eCLIP21.57■■□□□ 1.044e-22■□□□□ 9.6
RBM39-205ENST00000397370 CCDC125Q86Z20 511 aa21.57■■□□□ 1.04
RBM39-205ENST00000397370 TNS1Q9HBL0 1735 aaKnown RBP21.56■■□□□ 1.04
RBM39-205ENST00000397370 TRIM37O94972 964 aa21.56■■□□□ 1.04
RBM39-205ENST00000397370 AMOTQ4VCS5 1084 aa21.56■■□□□ 1.04
RBM39-205ENST00000397370 RSPH6AQ9H0K4 717 aa21.54■■□□□ 1.04
RBM39-205ENST00000397370 DOT1LQ8TEK3 1739 aa21.54■■□□□ 1.04
RBM39-205ENST00000397370 NHSQ6T4R5 1651 aa21.53■■□□□ 1.04
RBM39-205ENST00000397370 IFNL2Q8IZJ0 200 aa21.53■■□□□ 1.04
RBM39-205ENST00000397370 FCHSD2O94868 740 aa21.52■■□□□ 1.04
RBM39-205ENST00000397370 PHKG2P15735 406 aa21.52■■□□□ 1.04
RBM39-205ENST00000397370 SF3B2Q13435 895 aaKnown RBP21.52■■□□□ 1.04
RBM39-205ENST00000397370 ZNF530Q6P9A1 599 aaPredicted RBP21.52■■□□□ 1.04
RBM39-205ENST00000397370 ACSBG1Q96GR2 724 aa21.52■■□□□ 1.04
RBM39-205ENST00000397370 PRKAR2BP31323 418 aa21.51■■□□□ 1.03
RBM39-205ENST00000397370 NKX1-1Q15270 411 aaPredicted RBP21.51■■□□□ 1.03
RBM39-205ENST00000397370 KCNQ2O43526 872 aa21.5■■□□□ 1.03
RBM39-205ENST00000397370 PTF1AQ7RTS3 328 aa21.5■■□□□ 1.03
RBM39-205ENST00000397370 BCL11BQ9C0K0 894 aaPredicted RBP21.5■■□□□ 1.03
RBM39-205ENST00000397370 TOGARAM1Q9Y4F4 1720 aa21.49■■□□□ 1.03
RBM39-205ENST00000397370 MTHFSDQ2M296 383 aaKnown RBP21.49■■□□□ 1.03
RBM39-205ENST00000397370 ITGB4P16144 1822 aa21.48■■□□□ 1.03
RBM39-205ENST00000397370 CCDC184Q52MB2 194 aa21.48■■□□□ 1.03
RBM39-205ENST00000397370 C1orf141Q5JVX7 400 aa21.48■■□□□ 1.03
RBM39-205ENST00000397370 BTAF1O14981 1849 aa21.48■■□□□ 1.03
RBM39-205ENST00000397370 APBA3O96018 575 aa21.47■■□□□ 1.03
RBM39-205ENST00000397370 PHACTR3Q96KR7 559 aa21.47■■□□□ 1.03
RBM39-205ENST00000397370 VIRMAQ69YN4 1812 aaKnown RBP21.47■■□□□ 1.03
RBM39-205ENST00000397370 HSP90AB1P08238 724 aaKnown RBP21.46■■□□□ 1.03
RBM39-205ENST00000397370 BAG6P46379 1132 aa21.46■■□□□ 1.03
RBM39-205ENST00000397370 PRIM1P49642 420 aaKnown RBP21.46■■□□□ 1.03
RBM39-205ENST00000397370 WDR43Q15061 677 aaKnown RBP eCLIP21.46■■□□□ 1.03
RBM39-205ENST00000397370 AKAP4Q5JQC9 854 aa21.46■■□□□ 1.03
RBM39-205ENST00000397370 DEFB132Q7Z7B7 95 aa21.46■■□□□ 1.03
RBM39-205ENST00000397370 GAS2L2Q8NHY3 880 aa21.45■■□□□ 1.02
RBM39-205ENST00000397370 SYTL4Q96C24 671 aaPredicted RBP21.45■■□□□ 1.02
RBM39-205ENST00000397370 PNNQ9H307 717 aaKnown RBP21.45■■□□□ 1.02
RBM39-205ENST00000397370 SCN11AQ9UI33 1791 aa21.44■■□□□ 1.02
RBM39-205ENST00000397370 DCAF5Q96JK2 942 aa21.44■■□□□ 1.02
RBM39-205ENST00000397370 PLEKHF1Q96S99 279 aa21.44■■□□□ 1.02
RBM39-205ENST00000397370 KDM6AO15550 1401 aaPredicted RBP21.44■■□□□ 1.02
RBM39-205ENST00000397370 DIEXFQ68CQ4 756 aaKnown RBP21.43■■□□□ 1.02
RBM39-205ENST00000397370 NEFMP07197 916 aa21.42■■□□□ 1.02
RBM39-205ENST00000397370 EN1Q05925 392 aaPredicted RBP21.42■■□□□ 1.02
RBM39-205ENST00000397370 MRS2Q9HD23 443 aa21.42■■□□□ 1.02
RBM39-205ENST00000397370 ADAMTS8Q9UP79 889 aa21.42■■□□□ 1.02
RBM39-205ENST00000397370 RGPD3A6NKT7 1758 aaPredicted RBP21.41■■□□□ 1.02
RBM39-205ENST00000397370 RGPD4Q7Z3J3 1758 aa21.41■■□□□ 1.02
RBM39-205ENST00000397370 MPRIPQ6WCQ1 1025 aa21.41■■□□□ 1.02
RBM39-205ENST00000397370 ADAMTS7Q9UKP4 1686 aa21.4■■□□□ 1.02
RBM39-205ENST00000397370 DLG5Q8TDM6 1919 aa21.4■■□□□ 1.02
RBM39-205ENST00000397370 PLSCR1O15162 318 aa21.4■■□□□ 1.02
RBM39-205ENST00000397370 MAP3K5Q99683 1374 aa21.39■■□□□ 1.02
RBM39-205ENST00000397370 ERVV-2B6SEH9 535 aa21.39■■□□□ 1.01
RBM39-205ENST00000397370 CAMKK2Q96RR4 588 aa21.39■■□□□ 1.01
RBM39-205ENST00000397370 MAPK8IP3Q9UPT6 1336 aa21.38■■□□□ 1.01
RBM39-205ENST00000397370 GNAT3A8MTJ3 354 aa21.38■■□□□ 1.01
RBM39-205ENST00000397370 RNMTO43148 476 aaKnown RBP21.38■■□□□ 1.01
RBM39-205ENST00000397370 EZH2Q15910 746 aaKnown RBP21.38■■□□□ 1.01
RBM39-205ENST00000397370 PNISRQ8TF01 805 aaKnown RBP21.38■■□□□ 1.01
RBM39-205ENST00000397370 LGR6Q9HBX8 967 aa21.38■■□□□ 1.01
RBM39-205ENST00000397370 TMOD3Q9NYL9 352 aa21.38■■□□□ 1.01
RBM39-205ENST00000397370 CCDC146Q8IYE0 955 aa21.37■■□□□ 1.01
RBM39-205ENST00000397370 PIGBQ92521 554 aa21.37■■□□□ 1.01
RBM39-205ENST00000397370 RREB1Q92766 1687 aa21.36■■□□□ 1.01
RBM39-205ENST00000397370 CABP4P57796 275 aa21.35■■□□□ 1.01
RBM39-205ENST00000397370 NFE2L2Q16236 605 aa21.35■■□□□ 1.01
RBM39-205ENST00000397370 RUNDC1Q96C34 613 aa21.35■■□□□ 1.01
RBM39-205ENST00000397370 LY75O60449 1722 aa21.35■■□□□ 1.01
RBM39-205ENST00000397370 MRC1P22897 1456 aa21.34■■□□□ 1.01
RBM39-205ENST00000397370 IL17REQ8NFR9 667 aa21.34■■□□□ 1.01
RBM39-205ENST00000397370 NUP188Q5SRE5 1749 aa21.32■■□□□ 1
RBM39-205ENST00000397370 HTATSF1O43719 755 aaKnown RBP21.32■■□□□ 1
RBM39-205ENST00000397370 TXNRD1Q16881 649 aa21.32■■□□□ 1
RBM39-205ENST00000397370 PROM2Q8N271 834 aa21.32■■□□□ 1
RBM39-205ENST00000397370 NFATC2IPQ8NCF5 419 aa21.32■■□□□ 1
RBM39-205ENST00000397370 SLC52A2Q9HAB3 445 aa21.32■■□□□ 1
RBM39-205ENST00000397370 SIPA1L3O60292 1781 aaPredicted RBP21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms