RNA–Protein interactions for RNA: ENST00000396859.5

GAPDH-204, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-204ENST00000396859 SPG7Q9UQ90 795 aa18.28■□□□□ 0.52
GAPDH-204ENST00000396859 PLEKHG2Q9H7P9 1386 aa18.27■□□□□ 0.51
GAPDH-204ENST00000396859 HMOX1P09601 288 aa18.26■□□□□ 0.51
GAPDH-204ENST00000396859 FAM196AQ6ZSG2 479 aa18.26■□□□□ 0.51
GAPDH-204ENST00000396859 DDX54Q8TDD1 881 aaKnown RBP18.26■□□□□ 0.51
GAPDH-204ENST00000396859 U2AF1L5P0DN76 240 aaPredicted RBP18.25■□□□□ 0.51
GAPDH-204ENST00000396859 U2AF1Q01081 240 aaKnown RBP eCLIP18.25■□□□□ 0.51
GAPDH-204ENST00000396859 AEBP1Q8IUX7 1158 aa18.25■□□□□ 0.51
GAPDH-204ENST00000396859 KDRP35968 1356 aa18.25■□□□□ 0.51
GAPDH-204ENST00000396859 PCDH11XQ9BZA7 1347 aa18.24■□□□□ 0.51
GAPDH-204ENST00000396859 PCDH11YQ9BZA8 1340 aa18.24■□□□□ 0.51
GAPDH-204ENST00000396859 AMOTQ4VCS5 1084 aa18.24■□□□□ 0.51
GAPDH-204ENST00000396859 PLEKHO1Q53GL0 409 aaPredicted RBP18.24■□□□□ 0.51
GAPDH-204ENST00000396859 FAM182BQ5T319 152 aa18.24■□□□□ 0.51
GAPDH-204ENST00000396859 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.24■□□□□ 0.51
GAPDH-204ENST00000396859 MARCH10Q8NA82 808 aaPredicted RBP18.23■□□□□ 0.51
GAPDH-204ENST00000396859 NEFMP07197 916 aa18.22■□□□□ 0.51
GAPDH-204ENST00000396859 WDR43Q15061 677 aaKnown RBP eCLIP18.22■□□□□ 0.51
GAPDH-204ENST00000396859 PKD1L3Q7Z443 1732 aa18.22■□□□□ 0.51
GAPDH-204ENST00000396859 SF3B2Q13435 895 aaKnown RBP18.21■□□□□ 0.51
GAPDH-204ENST00000396859 PNNQ9H307 717 aaKnown RBP18.21■□□□□ 0.51
GAPDH-204ENST00000396859 FCHSD2O94868 740 aa18.2■□□□□ 0.5
GAPDH-204ENST00000396859 C1orf141Q5JVX7 400 aa18.19■□□□□ 0.5
GAPDH-204ENST00000396859 DIEXFQ68CQ4 756 aaKnown RBP18.19■□□□□ 0.5
GAPDH-204ENST00000396859 CCDC125Q86Z20 511 aa18.19■□□□□ 0.5
GAPDH-204ENST00000396859 IFNL2Q8IZJ0 200 aa18.19■□□□□ 0.5
GAPDH-204ENST00000396859 SHANK3Q9BYB0 1731 aa18.18■□□□□ 0.5
GAPDH-204ENST00000396859 PRKAR2BP31323 418 aa18.18■□□□□ 0.5
GAPDH-204ENST00000396859 ZNF530Q6P9A1 599 aaPredicted RBP18.18■□□□□ 0.5
GAPDH-204ENST00000396859 BCL9O00512 1426 aa18.17■□□□□ 0.5
GAPDH-204ENST00000396859 HSP90AB1P08238 724 aaKnown RBP18.17■□□□□ 0.5
GAPDH-204ENST00000396859 UPF1Q92900 1129 aaKnown RBP eCLIP18.17■□□□□ 0.5
GAPDH-204ENST00000396859 RSPH6AQ9H0K4 717 aa18.17■□□□□ 0.5
GAPDH-204ENST00000396859 MRS2Q9HD23 443 aa18.17■□□□□ 0.5
GAPDH-204ENST00000396859 CYP27B1O15528 508 aa18.16■□□□□ 0.5
GAPDH-204ENST00000396859 TRIM37O94972 964 aa18.16■□□□□ 0.5
GAPDH-204ENST00000396859 PHKG2P15735 406 aa18.15■□□□□ 0.5
GAPDH-204ENST00000396859 GAS2L2Q8NHY3 880 aa18.15■□□□□ 0.5
GAPDH-204ENST00000396859 ACSBG1Q96GR2 724 aa18.14■□□□□ 0.49
GAPDH-204ENST00000396859 MAPK8IP3Q9UPT6 1336 aa18.14■□□□□ 0.49
GAPDH-204ENST00000396859 SYTL4Q96C24 671 aaPredicted RBP18.13■□□□□ 0.49
GAPDH-204ENST00000396859 SBF2Q86WG5 1849 aa18.12■□□□□ 0.49
GAPDH-204ENST00000396859 BAG6P46379 1132 aa18.12■□□□□ 0.49
GAPDH-204ENST00000396859 NKX1-1Q15270 411 aaPredicted RBP18.12■□□□□ 0.49
GAPDH-204ENST00000396859 MTHFSDQ2M296 383 aaKnown RBP18.12■□□□□ 0.49
GAPDH-204ENST00000396859 AKAP4Q5JQC9 854 aa18.12■□□□□ 0.49
GAPDH-204ENST00000396859 BCL11BQ9C0K0 894 aaPredicted RBP18.12■□□□□ 0.49
GAPDH-204ENST00000396859 DCAF5Q96JK2 942 aa18.11■□□□□ 0.49
GAPDH-204ENST00000396859 NHSQ6T4R5 1651 aa18.11■□□□□ 0.49
GAPDH-204ENST00000396859 DOT1LQ8TEK3 1739 aa18.11■□□□□ 0.49
GAPDH-204ENST00000396859 KAT6BQ8WYB5 2073 aa18.1■□□□□ 0.49
GAPDH-204ENST00000396859 APBA3O96018 575 aa18.1■□□□□ 0.49
GAPDH-204ENST00000396859 PRIM1P49642 420 aaKnown RBP18.09■□□□□ 0.49
GAPDH-204ENST00000396859 CCDC184Q52MB2 194 aa18.09■□□□□ 0.49
GAPDH-204ENST00000396859 PHACTR3Q96KR7 559 aa18.09■□□□□ 0.49
GAPDH-204ENST00000396859 ADAMTS8Q9UP79 889 aa18.09■□□□□ 0.49
GAPDH-204ENST00000396859 TNS1Q9HBL0 1735 aaKnown RBP18.09■□□□□ 0.49
GAPDH-204ENST00000396859 MAP3K5Q99683 1374 aa18.08■□□□□ 0.49
GAPDH-204ENST00000396859 GNAT3A8MTJ3 354 aa18.08■□□□□ 0.48
GAPDH-204ENST00000396859 KCNQ2O43526 872 aa18.08■□□□□ 0.48
GAPDH-204ENST00000396859 MPRIPQ6WCQ1 1025 aa18.07■□□□□ 0.48
GAPDH-204ENST00000396859 RTF1Q92541 710 aaKnown RBP18.07■□□□□ 0.48
GAPDH-204ENST00000396859 RUNDC1Q96C34 613 aa18.07■□□□□ 0.48
GAPDH-204ENST00000396859 PLEKHF1Q96S99 279 aa18.07■□□□□ 0.48
GAPDH-204ENST00000396859 TMOD3Q9NYL9 352 aa18.07■□□□□ 0.48
GAPDH-204ENST00000396859 ERVV-2B6SEH9 535 aa18.06■□□□□ 0.48
GAPDH-204ENST00000396859 CABP4P57796 275 aa18.06■□□□□ 0.48
GAPDH-204ENST00000396859 CCER2I3L3R5 266 aa18.05■□□□□ 0.48
GAPDH-204ENST00000396859 CCDC146Q8IYE0 955 aa18.05■□□□□ 0.48
GAPDH-204ENST00000396859 PNISRQ8TF01 805 aaKnown RBP18.05■□□□□ 0.48
GAPDH-204ENST00000396859 EP400Q96L91 3159 aa18.04■□□□□ 0.48
GAPDH-204ENST00000396859 TOGARAM1Q9Y4F4 1720 aa18.04■□□□□ 0.48
GAPDH-204ENST00000396859 NFE2L2Q16236 605 aa18.04■□□□□ 0.48
GAPDH-204ENST00000396859 BTAF1O14981 1849 aa18.04■□□□□ 0.48
GAPDH-204ENST00000396859 KDM6AO15550 1401 aaPredicted RBP18.04■□□□□ 0.48
GAPDH-204ENST00000396859 ITGB4P16144 1822 aa18.03■□□□□ 0.48
GAPDH-204ENST00000396859 PLSCR1O15162 318 aa18.03■□□□□ 0.48
GAPDH-204ENST00000396859 RNMTO43148 476 aaKnown RBP18.03■□□□□ 0.48
GAPDH-204ENST00000396859 HTATSF1O43719 755 aaKnown RBP18.03■□□□□ 0.48
GAPDH-204ENST00000396859 PTF1AQ7RTS3 328 aa18.03■□□□□ 0.48
GAPDH-204ENST00000396859 DEFB132Q7Z7B7 95 aa18.03■□□□□ 0.48
GAPDH-204ENST00000396859 SCN11AQ9UI33 1791 aa18.03■□□□□ 0.48
GAPDH-204ENST00000396859 EN1Q05925 392 aaPredicted RBP18.02■□□□□ 0.48
GAPDH-204ENST00000396859 LMOD3Q0VAK6 560 aa18.02■□□□□ 0.48
GAPDH-204ENST00000396859 TEFQ10587 303 aa18.02■□□□□ 0.48
GAPDH-204ENST00000396859 FAM9BQ8IZU0 186 aa18.02■□□□□ 0.48
GAPDH-204ENST00000396859 SMARCC1Q92922 1105 aaPredicted RBP18.01■□□□□ 0.47
GAPDH-204ENST00000396859 LGR6Q9HBX8 967 aa18.01■□□□□ 0.47
GAPDH-204ENST00000396859 VIRMAQ69YN4 1812 aaKnown RBP18■□□□□ 0.47
GAPDH-204ENST00000396859 RGPD3A6NKT7 1758 aaPredicted RBP18■□□□□ 0.47
GAPDH-204ENST00000396859 RGPD4Q7Z3J3 1758 aa18■□□□□ 0.47
GAPDH-204ENST00000396859 RIPK4P57078 832 aa18■□□□□ 0.47
GAPDH-204ENST00000396859 MIER1Q8N108 512 aa18■□□□□ 0.47
GAPDH-204ENST00000396859 PIGBQ92521 554 aa18■□□□□ 0.47
GAPDH-204ENST00000396859 SLC52A2Q9HAB3 445 aa18■□□□□ 0.47
GAPDH-204ENST00000396859 TMPOP42166 694 aaKnown RBP17.99■□□□□ 0.47
GAPDH-204ENST00000396859 EZH2Q15910 746 aaKnown RBP17.99■□□□□ 0.47
GAPDH-204ENST00000396859 NFATC2IPQ8NCF5 419 aa17.99■□□□□ 0.47
GAPDH-204ENST00000396859 NEUROD2Q15784 382 aa17.98■□□□□ 0.47
GAPDH-204ENST00000396859 IL17REQ8NFR9 667 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms