RNA–Protein interactions for RNA: ENST00000394961.6

SMARCAD1-203, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2

Gene SMARCAD1, Length 3,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-203ENST00000394961 ARFGEF1Q9Y6D6 1849 aa8.82□□□□□ -1
SMARCAD1-203ENST00000394961 HOXC9P31274 260 aa8.82□□□□□ -1
SMARCAD1-203ENST00000394961 NME9Q86XW9 330 aa8.82□□□□□ -1
SMARCAD1-203ENST00000394961 DLEC1Q9Y238 1755 aa8.81□□□□□ -1
SMARCAD1-203ENST00000394961 USP47Q96K76 1375 aa8.81□□□□□ -1
SMARCAD1-203ENST00000394961 C4AP0C0L4 1744 aa8.81□□□□□ -1
SMARCAD1-203ENST00000394961 UBR2Q8IWV8 1755 aa8.81□□□□□ -1
SMARCAD1-203ENST00000394961 MAP3K19Q56UN5 1328 aa8.81□□□□□ -1
SMARCAD1-203ENST00000394961 NKX1-1Q15270 411 aaPredicted RBP8.81□□□□□ -1
SMARCAD1-203ENST00000394961 TJP1Q07157 1748 aa8.8□□□□□ -1
SMARCAD1-203ENST00000394961 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.8□□□□□ -18e-7■■■■□ 20.5
SMARCAD1-203ENST00000394961 SIPA1L3O60292 1781 aaPredicted RBP8.8□□□□□ -1
SMARCAD1-203ENST00000394961 NRXN2Q9P2S2 1712 aa8.8□□□□□ -1
SMARCAD1-203ENST00000394961 MRC1P22897 1456 aa8.79□□□□□ -1
SMARCAD1-203ENST00000394961 TMF1P82094 1093 aa8.79□□□□□ -1
SMARCAD1-203ENST00000394961 COG3Q96JB2 828 aa8.79□□□□□ -1
SMARCAD1-203ENST00000394961 SLC12A5Q9H2X9 1139 aa8.79□□□□□ -1
SMARCAD1-203ENST00000394961 USP35Q9P2H5 1018 aa8.78□□□□□ -1
SMARCAD1-203ENST00000394961 PCDH11XQ9BZA7 1347 aa8.77□□□□□ -1.01
SMARCAD1-203ENST00000394961 PCDH11YQ9BZA8 1340 aa8.77□□□□□ -1.01
SMARCAD1-203ENST00000394961 FYB1O15117 783 aa8.77□□□□□ -1.01
SMARCAD1-203ENST00000394961 CSB-PGBD3P0DP91 1061 aa8.77□□□□□ -1.01
SMARCAD1-203ENST00000394961 ARFGEF2Q9Y6D5 1785 aa8.77□□□□□ -1.01
SMARCAD1-203ENST00000394961 PTF1AQ7RTS3 328 aa8.76□□□□□ -1.01
SMARCAD1-203ENST00000394961 FLAD1Q8NFF5 587 aa8.76□□□□□ -1.01
SMARCAD1-203ENST00000394961 KDRP35968 1356 aa8.76□□□□□ -1.01
SMARCAD1-203ENST00000394961 WASHC2AQ641Q2 1341 aa8.76□□□□□ -1.01
SMARCAD1-203ENST00000394961 PNPLA7Q6ZV29 1317 aa8.76□□□□□ -1.01
SMARCAD1-203ENST00000394961 ST20-MTHFSA0A0A6YYL1 179 aa8.76□□□□□ -1.01
SMARCAD1-203ENST00000394961 DCAF8L1A6NGE4 600 aa8.76□□□□□ -1.01
SMARCAD1-203ENST00000394961 ZCRB1Q8TBF4 217 aaKnown RBP8.75□□□□□ -1.01
SMARCAD1-203ENST00000394961 ADCY9O60503 1353 aa8.75□□□□□ -1.01
SMARCAD1-203ENST00000394961 TRIM26Q12899 539 aaPredicted RBP8.74□□□□□ -1.01
SMARCAD1-203ENST00000394961 ZNF827Q17R98 1081 aa8.74□□□□□ -1.01
SMARCAD1-203ENST00000394961 LRRC4BQ9NT99 713 aa8.74□□□□□ -1.01
SMARCAD1-203ENST00000394961 NLRP2Q9NX02 1062 aa8.74□□□□□ -1.01
SMARCAD1-203ENST00000394961 NEUROD1Q13562 356 aa8.74□□□□□ -1.01
SMARCAD1-203ENST00000394961 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.74□□□□□ -1.01
SMARCAD1-203ENST00000394961 PLEKHG5O94827 1062 aa8.73□□□□□ -1.01
SMARCAD1-203ENST00000394961 SMARCC1Q92922 1105 aaPredicted RBP8.73□□□□□ -1.01
SMARCAD1-203ENST00000394961 SYT17Q9BSW7 474 aa8.73□□□□□ -1.01
SMARCAD1-203ENST00000394961 ARXQ96QS3 562 aa8.72□□□□□ -1.01
SMARCAD1-203ENST00000394961 PPP1R1BQ9UD71 204 aaPredicted RBP8.72□□□□□ -1.01
SMARCAD1-203ENST00000394961 BCORQ6W2J9 1755 aa8.72□□□□□ -1.01
SMARCAD1-203ENST00000394961 TNRC6CQ9HCJ0 1690 aaKnown RBP8.72□□□□□ -1.01
SMARCAD1-203ENST00000394961 SCN7AQ01118 1682 aa8.72□□□□□ -1.01
SMARCAD1-203ENST00000394961 YY1P25490 414 aa8.72□□□□□ -1.01
SMARCAD1-203ENST00000394961 NPC1L1Q9UHC9 1359 aa8.72□□□□□ -1.01
SMARCAD1-203ENST00000394961 CD2APQ9Y5K6 639 aa8.71□□□□□ -1.01
SMARCAD1-203ENST00000394961 C10orf71Q711Q0 1435 aa8.71□□□□□ -1.01
SMARCAD1-203ENST00000394961 TATP17735 454 aaPredicted RBP8.71□□□□□ -1.02
SMARCAD1-203ENST00000394961 NBPF6Q5VWK0 638 aa8.71□□□□□ -1.02
SMARCAD1-203ENST00000394961 TMC1Q8TDI8 760 aa8.71□□□□□ -1.02
SMARCAD1-203ENST00000394961 NBPF4Q96M43 638 aa8.71□□□□□ -1.02
SMARCAD1-203ENST00000394961 CARD14Q9BXL6 1004 aa8.71□□□□□ -1.02
SMARCAD1-203ENST00000394961 IGSF1Q8N6C5 1336 aa8.71□□□□□ -1.02
SMARCAD1-203ENST00000394961 AMPHP49418 695 aa8.7□□□□□ -1.02
SMARCAD1-203ENST00000394961 FHDC1Q9C0D6 1143 aaPredicted RBP8.7□□□□□ -1.02
SMARCAD1-203ENST00000394961 PALLDQ8WX93 1383 aa8.7□□□□□ -1.02
SMARCAD1-203ENST00000394961 KAT6BQ8WYB5 2073 aa8.69□□□□□ -1.02
SMARCAD1-203ENST00000394961 SSFA2P28290 1259 aa8.69□□□□□ -1.02
SMARCAD1-203ENST00000394961 POLD1P28340 1107 aa8.69□□□□□ -1.02
SMARCAD1-203ENST00000394961 AFDNP55196 1824 aaKnown RBP8.69□□□□□ -1.02
SMARCAD1-203ENST00000394961 MYH14Q7Z406 1995 aaKnown RBP8.68□□□□□ -1.02
SMARCAD1-203ENST00000394961 RC3H1Q5TC82 1133 aaKnown RBP8.68□□□□□ -1.02
SMARCAD1-203ENST00000394961 PDGFDQ9GZP0 370 aaPredicted RBP8.68□□□□□ -1.02
SMARCAD1-203ENST00000394961 DICER1Q9UPY3 1922 aaKnown RBP8.68□□□□□ -1.02
SMARCAD1-203ENST00000394961 RAPGEF4Q8WZA2 1011 aa8.68□□□□□ -1.02
SMARCAD1-203ENST00000394961 SPG7Q9UQ90 795 aa8.68□□□□□ -1.02
SMARCAD1-203ENST00000394961 COL3A1P02461 1466 aaPredicted RBP8.68□□□□□ -1.02
SMARCAD1-203ENST00000394961 LAMB4A4D0S4 1761 aa8.68□□□□□ -1.02
SMARCAD1-203ENST00000394961 CNTNAP4Q9C0A0 1308 aa8.68□□□□□ -1.02
SMARCAD1-203ENST00000394961 SBF1O95248 1867 aa8.68□□□□□ -1.02
SMARCAD1-203ENST00000394961 ZBTB7CA1YPR0 619 aa8.68□□□□□ -1.02
SMARCAD1-203ENST00000394961 N4BP2Q86UW6 1770 aaPredicted RBP8.68□□□□□ -1.02
SMARCAD1-203ENST00000394961 ERVV-2B6SEH9 535 aa8.67□□□□□ -1.02
SMARCAD1-203ENST00000394961 GRIN3BO60391 1043 aa8.67□□□□□ -1.02
SMARCAD1-203ENST00000394961 ZBTB7AO95365 584 aa8.67□□□□□ -1.02
SMARCAD1-203ENST00000394961 ADRA2BP18089 450 aa8.67□□□□□ -1.02
SMARCAD1-203ENST00000394961 PRIM1P49642 420 aaKnown RBP8.67□□□□□ -1.02
SMARCAD1-203ENST00000394961 CYP27B1O15528 508 aa8.67□□□□□ -1.02
SMARCAD1-203ENST00000394961 ACSBG1Q96GR2 724 aa8.67□□□□□ -1.02
SMARCAD1-203ENST00000394961 KCPQ6ZWJ8 1503 aa8.67□□□□□ -1.02
SMARCAD1-203ENST00000394961 HSP90AB1P08238 724 aaKnown RBP8.67□□□□□ -1.02
SMARCAD1-203ENST00000394961 CCNL1Q9UK58 526 aaPredicted RBP8.67□□□□□ -1.02
SMARCAD1-203ENST00000394961 KDM6AO15550 1401 aaPredicted RBP8.66□□□□□ -1.02
SMARCAD1-203ENST00000394961 POLKQ9UBT6 870 aa8.66□□□□□ -1.02
SMARCAD1-203ENST00000394961 COL23A1Q86Y22 540 aaPredicted RBP8.65□□□□□ -1.02
SMARCAD1-203ENST00000394961 PHKG2P15735 406 aa8.65□□□□□ -1.02
SMARCAD1-203ENST00000394961 ZNF784Q8NCA9 323 aaPredicted RBP8.65□□□□□ -1.02
SMARCAD1-203ENST00000394961 HSP90AB2PQ58FF8 381 aa8.65□□□□□ -1.03
SMARCAD1-203ENST00000394961 GGNBP2Q9H3C7 697 aa8.65□□□□□ -1.03
SMARCAD1-203ENST00000394961 PXDNLA1KZ92 1463 aa8.64□□□□□ -1.03
SMARCAD1-203ENST00000394961 AMOTQ4VCS5 1084 aa8.64□□□□□ -1.03
SMARCAD1-203ENST00000394961 IFNL2Q8IZJ0 200 aa8.64□□□□□ -1.03
SMARCAD1-203ENST00000394961 ATF5Q9Y2D1 282 aaPredicted RBP8.64□□□□□ -1.03
SMARCAD1-203ENST00000394961 TIAM2Q8IVF5 1701 aa8.64□□□□□ -1.03
SMARCAD1-203ENST00000394961 RRS1Q15050 365 aaKnown RBP8.64□□□□□ -1.03
SMARCAD1-203ENST00000394961 EYA1Q99502 592 aa8.63□□□□□ -1.03
SMARCAD1-203ENST00000394961 WDR90Q96KV7 1748 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms