RNA–Protein interactions for RNA: ENST00000394849.1

UPK3B-203, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 1,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-203ENST00000394849 GRIN3BO60391 1043 aa27.9■■■□□ 2.06
UPK3B-203ENST00000394849 PELP1Q8IZL8 1130 aaKnown RBP27.9■■■□□ 2.06
UPK3B-203ENST00000394849 TUBGCP6Q96RT7 1819 aa27.88■■■□□ 2.05
UPK3B-203ENST00000394849 LTV1Q96GA3 475 aaPredicted RBP27.88■■■□□ 2.05
UPK3B-203ENST00000394849 ZCRB1Q8TBF4 217 aaKnown RBP27.87■■■□□ 2.05
UPK3B-203ENST00000394849 COG3Q96JB2 828 aa27.87■■■□□ 2.05
UPK3B-203ENST00000394849 DOT1LQ8TEK3 1739 aa27.87■■■□□ 2.05
UPK3B-203ENST00000394849 SLC24A1O60721 1099 aa27.86■■■□□ 2.05
UPK3B-203ENST00000394849 CCNL1Q9UK58 526 aaPredicted RBP27.85■■■□□ 2.05
UPK3B-203ENST00000394849 CGNL1Q0VF96 1302 aa27.85■■■□□ 2.05
UPK3B-203ENST00000394849 HOXC9P31274 260 aa27.84■■■□□ 2.05
UPK3B-203ENST00000394849 AMPHP49418 695 aa27.84■■■□□ 2.05
UPK3B-203ENST00000394849 NLGN2Q8NFZ4 835 aa27.84■■■□□ 2.05
UPK3B-203ENST00000394849 NSD2O96028 1365 aa27.84■■■□□ 2.05
UPK3B-203ENST00000394849 USP47Q96K76 1375 aa27.83■■■□□ 2.05
UPK3B-203ENST00000394849 KCNQ4P56696 695 aa27.82■■■□□ 2.04
UPK3B-203ENST00000394849 MAP3K19Q56UN5 1328 aa27.82■■■□□ 2.04
UPK3B-203ENST00000394849 SHANK3Q9BYB0 1731 aa27.81■■■□□ 2.04
UPK3B-203ENST00000394849 MSH5O43196 834 aa27.8■■■□□ 2.04
UPK3B-203ENST00000394849 RTL1A6NKG5 1358 aa27.8■■■□□ 2.04
UPK3B-203ENST00000394849 CEP350Q5VT06 3117 aa27.78■■■□□ 2.04
UPK3B-203ENST00000394849 FLAD1Q8NFF5 587 aa27.78■■■□□ 2.04
UPK3B-203ENST00000394849 COL23A1Q86Y22 540 aaPredicted RBP27.77■■■□□ 2.04
UPK3B-203ENST00000394849 MEGF6O75095 1541 aa27.77■■■□□ 2.04
UPK3B-203ENST00000394849 YBX3P16989 372 aaKnown RBP eCLIP27.76■■■□□ 2.03
UPK3B-203ENST00000394849 CD2APQ9Y5K6 639 aa27.76■■■□□ 2.03
UPK3B-203ENST00000394849 RGPD2P0DJD1 1756 aa27.76■■■□□ 2.03
UPK3B-203ENST00000394849 RAPGEF4Q8WZA2 1011 aa27.75■■■□□ 2.03
UPK3B-203ENST00000394849 SMG6Q86US8 1419 aaKnown RBP27.74■■■□□ 2.03
UPK3B-203ENST00000394849 IFFO2Q5TF58 517 aa27.73■■■□□ 2.03
UPK3B-203ENST00000394849 NBPF6Q5VWK0 638 aa27.71■■■□□ 2.03
UPK3B-203ENST00000394849 NBPF4Q96M43 638 aa27.71■■■□□ 2.03
UPK3B-203ENST00000394849 C5P01031 1676 aa27.71■■■□□ 2.03
UPK3B-203ENST00000394849 TESK2Q96S53 571 aa27.7■■■□□ 2.02
UPK3B-203ENST00000394849 TONSLQ96HA7 1378 aa27.7■■■□□ 2.02
UPK3B-203ENST00000394849 TATP17735 454 aaPredicted RBP27.69■■■□□ 2.02
UPK3B-203ENST00000394849 PCDH11XQ9BZA7 1347 aa27.68■■■□□ 2.02
UPK3B-203ENST00000394849 PCDH11YQ9BZA8 1340 aa27.68■■■□□ 2.02
UPK3B-203ENST00000394849 ATP10DQ9P241 1426 aa27.67■■■□□ 2.02
UPK3B-203ENST00000394849 FBLN1P23142 703 aa27.67■■■□□ 2.02
UPK3B-203ENST00000394849 MSL1Q68DK7 614 aa27.67■■■□□ 2.02
UPK3B-203ENST00000394849 GPBP1L1Q9HC44 474 aaPredicted RBP27.66■■■□□ 2.02
UPK3B-203ENST00000394849 TAF1LQ8IZX4 1826 aa27.66■■■□□ 2.02
UPK3B-203ENST00000394849 KIF24Q5T7B8 1368 aa27.65■■■□□ 2.02
UPK3B-203ENST00000394849 PALLDQ8WX93 1383 aa27.65■■■□□ 2.02
UPK3B-203ENST00000394849 ST20-MTHFSA0A0A6YYL1 179 aa27.65■■■□□ 2.02
UPK3B-203ENST00000394849 SMARCC1Q92922 1105 aaPredicted RBP27.65■■■□□ 2.02
UPK3B-203ENST00000394849 RRS1Q15050 365 aaKnown RBP27.64■■■□□ 2.02
UPK3B-203ENST00000394849 NSD3Q9BZ95 1437 aa27.64■■■□□ 2.02
UPK3B-203ENST00000394849 INSRP06213 1382 aa27.63■■■□□ 2.01
UPK3B-203ENST00000394849 FYB1O15117 783 aa27.63■■■□□ 2.01
UPK3B-203ENST00000394849 USHBP1Q8N6Y0 703 aa27.62■■■□□ 2.01
UPK3B-203ENST00000394849 MPRIPQ6WCQ1 1025 aa27.61■■■□□ 2.01
UPK3B-203ENST00000394849 AK7Q96M32 723 aa27.6■■■□□ 2.01
UPK3B-203ENST00000394849 ADCY9O60503 1353 aa27.6■■■□□ 2.01
UPK3B-203ENST00000394849 FLT4P35916 1363 aa27.6■■■□□ 2.01
UPK3B-203ENST00000394849 C4BP0C0L5 1744 aa27.59■■■□□ 2.01
UPK3B-203ENST00000394849 GGNBP2Q9H3C7 697 aa27.59■■■□□ 2.01
UPK3B-203ENST00000394849 ITGB4P16144 1822 aa27.56■■■□□ 2
UPK3B-203ENST00000394849 TMF1P82094 1093 aa27.56■■■□□ 2
UPK3B-203ENST00000394849 HSP90AB2PQ58FF8 381 aa27.56■■■□□ 2
UPK3B-203ENST00000394849 CYP27B1O15528 508 aa27.55■■■□□ 2
UPK3B-203ENST00000394849 HSPA6P17066 643 aa27.55■■■□□ 2
UPK3B-203ENST00000394849 SSFA2P28290 1259 aa27.54■■■□□ 2
UPK3B-203ENST00000394849 UBR3Q6ZT12 1888 aa27.54■■■□□ 2
UPK3B-203ENST00000394849 CDCA8Q53HL2 280 aa27.53■■■□□ 2
UPK3B-203ENST00000394849 IGSF1Q8N6C5 1336 aa27.52■■■□□ 2
UPK3B-203ENST00000394849 TRIM26Q12899 539 aaPredicted RBP27.52■■■□□ 2
UPK3B-203ENST00000394849 NKX1-1Q15270 411 aaPredicted RBP27.52■■■□□ 2
UPK3B-203ENST00000394849 KIF20BQ96Q89 1820 aa27.52■■■□□ 2
UPK3B-203ENST00000394849 PKD1L3Q7Z443 1732 aa27.52■■■□□ 2
UPK3B-203ENST00000394849 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.51■■□□□ 1.99
UPK3B-203ENST00000394849 SPG7Q9UQ90 795 aa27.51■■□□□ 1.99
UPK3B-203ENST00000394849 TOGARAM1Q9Y4F4 1720 aa27.5■■□□□ 1.99
UPK3B-203ENST00000394849 PIGBQ92521 554 aa27.49■■□□□ 1.99
UPK3B-203ENST00000394849 PHF14O94880 888 aa27.48■■□□□ 1.99
UPK3B-203ENST00000394849 LOC102724428A0A0B4J2F2 783 aa27.47■■□□□ 1.99
UPK3B-203ENST00000394849 SIK1P57059 783 aa27.47■■□□□ 1.99
UPK3B-203ENST00000394849 ZNF526Q8TF50 670 aaPredicted RBP27.47■■□□□ 1.99
UPK3B-203ENST00000394849 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.47■■□□□ 1.99
UPK3B-203ENST00000394849 NCAPD2Q15021 1401 aa27.46■■□□□ 1.99
UPK3B-203ENST00000394849 MAP2P11137 1827 aaKnown RBP27.46■■□□□ 1.99
UPK3B-203ENST00000394849 AMIGO3Q86WK7 504 aa27.45■■□□□ 1.98
UPK3B-203ENST00000394849 TMOD3Q9NYL9 352 aa27.44■■□□□ 1.98
UPK3B-203ENST00000394849 LINC00116Q8NCU8 138 aa27.42■■□□□ 1.98
UPK3B-203ENST00000394849 CICQ96RK0 1608 aaPredicted RBP27.41■■□□□ 1.98
UPK3B-203ENST00000394849 GNPATO15228 680 aa27.4■■□□□ 1.98
UPK3B-203ENST00000394849 EMILIN1Q9Y6C2 1016 aa27.4■■□□□ 1.98
UPK3B-203ENST00000394849 ATP6V1AP38606 617 aa27.39■■□□□ 1.98
UPK3B-203ENST00000394849 WASHC2AQ641Q2 1341 aa27.39■■□□□ 1.97
UPK3B-203ENST00000394849 PLEKHG2Q9H7P9 1386 aa27.38■■□□□ 1.97
UPK3B-203ENST00000394849 KIF3CO14782 793 aa27.38■■□□□ 1.97
UPK3B-203ENST00000394849 TGFB2P61812 414 aa27.38■■□□□ 1.97
UPK3B-203ENST00000394849 IFNL2Q8IZJ0 200 aa27.38■■□□□ 1.97
UPK3B-203ENST00000394849 ANKRD26Q9UPS8 1709 aa27.38■■□□□ 1.97
UPK3B-203ENST00000394849 PPM1GO15355 546 aaPredicted RBP27.37■■□□□ 1.97
UPK3B-203ENST00000394849 KIF13BQ9NQT8 1826 aa27.37■■□□□ 1.97
UPK3B-203ENST00000394849 MMP10P09238 476 aa27.36■■□□□ 1.97
UPK3B-203ENST00000394849 SMIM5Q71RC9 77 aa27.36■■□□□ 1.97
UPK3B-203ENST00000394849 NLGN1Q8N2Q7 840 aa27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms