RNA–Protein interactions for RNA: ENST00000394258.6

RCCD1-201, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCCD1, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-201ENST00000394258 TTC21AQ8NDW8 1320 aa24.41■■□□□ 1.5
RCCD1-201ENST00000394258 KCNA6P17658 529 aa24.41■■□□□ 1.5
RCCD1-201ENST00000394258 INTS3Q68E01 1043 aaKnown RBP24.41■■□□□ 1.5
RCCD1-201ENST00000394258 TSPYL4Q9UJ04 414 aa24.41■■□□□ 1.5
RCCD1-201ENST00000394258 C16orf71Q8IYS4 520 aaPredicted RBP24.4■■□□□ 1.5
RCCD1-201ENST00000394258 RBM33Q96EV2 1170 aaKnown RBP24.4■■□□□ 1.5
RCCD1-201ENST00000394258 LTV1Q96GA3 475 aaPredicted RBP24.4■■□□□ 1.5
RCCD1-201ENST00000394258 RGPD8O14715 1765 aaPredicted RBP24.4■■□□□ 1.5
RCCD1-201ENST00000394258 C14orf37Q86TY3 774 aa24.39■■□□□ 1.5
RCCD1-201ENST00000394258 SLC4A10Q6U841 1118 aa24.39■■□□□ 1.49
RCCD1-201ENST00000394258 TBC1D9Q6ZT07 1266 aa24.39■■□□□ 1.49
RCCD1-201ENST00000394258 HSCBQ8IWL3 235 aa24.39■■□□□ 1.49
RCCD1-201ENST00000394258 ARXQ96QS3 562 aa24.38■■□□□ 1.49
RCCD1-201ENST00000394258 MEIS3Q99687 375 aa24.38■■□□□ 1.49
RCCD1-201ENST00000394258 FLT4P35916 1363 aa24.38■■□□□ 1.49
RCCD1-201ENST00000394258 G2E3Q7L622 706 aa24.38■■□□□ 1.49
RCCD1-201ENST00000394258 F6X3S4 739 aa24.38■■□□□ 1.49
RCCD1-201ENST00000394258 HAP1P54257 671 aaPredicted RBP24.38■■□□□ 1.49
RCCD1-201ENST00000394258 RIMS1Q86UR5 1692 aaKnown RBP24.37■■□□□ 1.49
RCCD1-201ENST00000394258 CRB1P82279 1406 aa24.37■■□□□ 1.49
RCCD1-201ENST00000394258 RBM25P49756 843 aaKnown RBP24.37■■□□□ 1.49
RCCD1-201ENST00000394258 SBNO1A3KN83 1393 aa24.37■■□□□ 1.49
RCCD1-201ENST00000394258 MSH6P52701 1360 aa24.36■■□□□ 1.49
RCCD1-201ENST00000394258 NECTIN2Q92692 538 aa24.36■■□□□ 1.49
RCCD1-201ENST00000394258 DCTPP1Q9H773 170 aa24.36■■□□□ 1.49
RCCD1-201ENST00000394258 RGS12O14924 1447 aa24.36■■□□□ 1.49
RCCD1-201ENST00000394258 ARHGEF10O15013 1369 aa24.35■■□□□ 1.49
RCCD1-201ENST00000394258 KIAA0232Q92628 1395 aa24.35■■□□□ 1.49
RCCD1-201ENST00000394258 MCM4P33991 863 aa24.35■■□□□ 1.49
RCCD1-201ENST00000394258 OTUD7AQ8TE49 926 aaPredicted RBP24.35■■□□□ 1.49
RCCD1-201ENST00000394258 GZF1Q9H116 711 aaPredicted RBP24.35■■□□□ 1.49
RCCD1-201ENST00000394258 CHMP5Q9NZZ3 219 aa24.35■■□□□ 1.49
RCCD1-201ENST00000394258 SMARCA5O60264 1052 aaPredicted RBP24.35■■□□□ 1.49
RCCD1-201ENST00000394258 PLEKHM2Q8IWE5 1019 aa24.35■■□□□ 1.49
RCCD1-201ENST00000394258 ABTB2Q8N961 1025 aa24.35■■□□□ 1.49
RCCD1-201ENST00000394258 DIP2AQ14689 1571 aa24.34■■□□□ 1.49
RCCD1-201ENST00000394258 GSPT1P15170 499 aaKnown RBP24.34■■□□□ 1.49
RCCD1-201ENST00000394258 NALCNQ8IZF0 1738 aa24.34■■□□□ 1.49
RCCD1-201ENST00000394258 CEP85Q6P2H3 762 aa24.34■■□□□ 1.49
RCCD1-201ENST00000394258 ANKRD44Q8N8A2 993 aa24.34■■□□□ 1.49
RCCD1-201ENST00000394258 KIF2CQ99661 725 aa24.34■■□□□ 1.49
RCCD1-201ENST00000394258 RBM42Q9BTD8 480 aaKnown RBP24.33■■□□□ 1.49
RCCD1-201ENST00000394258 ARHGAP23Q9P227 1491 aa24.33■■□□□ 1.49
RCCD1-201ENST00000394258 SLIT1O75093 1534 aa24.33■■□□□ 1.49
RCCD1-201ENST00000394258 CD2BP2O95400 341 aaKnown RBP24.33■■□□□ 1.48
RCCD1-201ENST00000394258 RGPD1P0DJD0 1748 aa24.32■■□□□ 1.48
RCCD1-201ENST00000394258 CEP170BQ9Y4F5 1589 aaPredicted RBP24.32■■□□□ 1.48
RCCD1-201ENST00000394258 FOXD4L1Q9NU39 408 aa24.32■■□□□ 1.48
RCCD1-201ENST00000394258 PTPRCP08575 1304 aa24.32■■□□□ 1.48
RCCD1-201ENST00000394258 IGSF1Q8N6C5 1336 aa24.31■■□□□ 1.48
RCCD1-201ENST00000394258 PLEKHG5O94827 1062 aa24.31■■□□□ 1.48
RCCD1-201ENST00000394258 USHBP1Q8N6Y0 703 aa24.31■■□□□ 1.48
RCCD1-201ENST00000394258 KIF24Q5T7B8 1368 aa24.3■■□□□ 1.48
RCCD1-201ENST00000394258 GAS2L2Q8NHY3 880 aa24.3■■□□□ 1.48
RCCD1-201ENST00000394258 RTL1A6NKG5 1358 aa24.3■■□□□ 1.48
RCCD1-201ENST00000394258 HOXC9P31274 260 aa24.3■■□□□ 1.48
RCCD1-201ENST00000394258 ATP10DQ9P241 1426 aa24.3■■□□□ 1.48
RCCD1-201ENST00000394258 TRHP20396 242 aaPredicted RBP24.29■■□□□ 1.48
RCCD1-201ENST00000394258 RPAP2Q8IXW5 612 aaPredicted RBP24.29■■□□□ 1.48
RCCD1-201ENST00000394258 CDC45O75419 566 aa24.29■■□□□ 1.48
RCCD1-201ENST00000394258 KDRP35968 1356 aa24.28■■□□□ 1.48
RCCD1-201ENST00000394258 ZBTB7CA1YPR0 619 aa24.28■■□□□ 1.48
RCCD1-201ENST00000394258 HSP90AB1P08238 724 aaKnown RBP24.28■■□□□ 1.48
RCCD1-201ENST00000394258 PIK3C2AO00443 1686 aa24.26■■□□□ 1.47
RCCD1-201ENST00000394258 GNAT3A8MTJ3 354 aa24.26■■□□□ 1.47
RCCD1-201ENST00000394258 TTC22Q5TAA0 569 aa24.26■■□□□ 1.47
RCCD1-201ENST00000394258 SNX21Q969T3 373 aa24.26■■□□□ 1.47
RCCD1-201ENST00000394258 STK31Q9BXU1 1019 aa24.26■■□□□ 1.47
RCCD1-201ENST00000394258 FMN2Q9NZ56 1722 aa24.25■■□□□ 1.47
RCCD1-201ENST00000394258 FAM43AQ8N2R8 423 aa24.25■■□□□ 1.47
RCCD1-201ENST00000394258 FER1L4A9Z1Z3 1794 aa24.25■■□□□ 1.47
RCCD1-201ENST00000394258 DDIT3P35638 169 aa24.25■■□□□ 1.47
RCCD1-201ENST00000394258 HSP90AA1P07900 732 aaKnown RBP24.24■■□□□ 1.47
RCCD1-201ENST00000394258 IL17REQ8NFR9 667 aa24.24■■□□□ 1.47
RCCD1-201ENST00000394258 NCOA3Q9Y6Q9 1424 aa24.24■■□□□ 1.47
RCCD1-201ENST00000394258 TRAK2O60296 914 aa24.23■■□□□ 1.47
RCCD1-201ENST00000394258 FKBP5Q13451 457 aaPredicted RBP24.23■■□□□ 1.47
RCCD1-201ENST00000394258 SETD1BQ9UPS6 1966 aaKnown RBP24.21■■□□□ 1.47
RCCD1-201ENST00000394258 RRAGDQ9NQL2 400 aaPredicted RBP24.21■■□□□ 1.47
RCCD1-201ENST00000394258 SDSP20132 328 aa24.2■■□□□ 1.47
RCCD1-201ENST00000394258 FLIIQ13045 1269 aa24.2■■□□□ 1.47
RCCD1-201ENST00000394258 TNPO1Q92973 898 aaKnown RBP24.2■■□□□ 1.47
RCCD1-201ENST00000394258 PHF8Q9UPP1 1060 aa24.2■■□□□ 1.47
RCCD1-201ENST00000394258 CCT4P50991 539 aaKnown RBP24.2■■□□□ 1.46
RCCD1-201ENST00000394258 EXOC6BQ9Y2D4 811 aa24.19■■□□□ 1.46
RCCD1-201ENST00000394258 CCDC30Q5VVM6 783 aa24.18■■□□□ 1.46
RCCD1-201ENST00000394258 HMMRO75330 724 aa24.18■■□□□ 1.46
RCCD1-201ENST00000394258 TSHZ3Q63HK5 1081 aa24.18■■□□□ 1.46
RCCD1-201ENST00000394258 XRCC6P12956 609 aaKnown RBP eCLIP24.17■■□□□ 1.46
RCCD1-201ENST00000394258 ESCO1Q5FWF5 840 aa24.17■■□□□ 1.46
RCCD1-201ENST00000394258 XRN1Q8IZH2 1706 aaKnown RBP24.16■■□□□ 1.46
RCCD1-201ENST00000394258 ANKARQ7Z5J8 1434 aa24.16■■□□□ 1.46
RCCD1-201ENST00000394258 HTATSF1O43719 755 aaKnown RBP24.16■■□□□ 1.46
RCCD1-201ENST00000394258 GNAI2P04899 355 aa24.16■■□□□ 1.46
RCCD1-201ENST00000394258 TAF7Q15545 349 aaPredicted RBP24.16■■□□□ 1.46
RCCD1-201ENST00000394258 K7ELQ4 463 aaPredicted RBP24.16■■□□□ 1.46
RCCD1-201ENST00000394258 PANK2Q9BZ23 570 aa24.16■■□□□ 1.46
RCCD1-201ENST00000394258 MAP3K5Q99683 1374 aa24.15■■□□□ 1.46
RCCD1-201ENST00000394258 PSME1Q06323 249 aa24.15■■□□□ 1.46
RCCD1-201ENST00000394258 GOLGA6L3A6NEY3 463 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms