RNA–Protein interactions for RNA: ENST00000394157.7

PSEN1-203, Transcript of presenilin 1, humanhuman

TSL 2 BASIC

Gene PSEN1, Length 1,249 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-203ENST00000394157 HMOX1P09601 288 aa25.71■■□□□ 1.71
PSEN1-203ENST00000394157 TATP17735 454 aaPredicted RBP25.71■■□□□ 1.71
PSEN1-203ENST00000394157 AEBP1Q8IUX7 1158 aa25.71■■□□□ 1.71
PSEN1-203ENST00000394157 RSPH6AQ9H0K4 717 aa25.71■■□□□ 1.71
PSEN1-203ENST00000394157 ADAMTS8Q9UP79 889 aa25.71■■□□□ 1.71
PSEN1-203ENST00000394157 WNK3Q9BYP7 1800 aa25.71■■□□□ 1.71
PSEN1-203ENST00000394157 PARP4Q9UKK3 1724 aaKnown RBP25.71■■□□□ 1.71
PSEN1-203ENST00000394157 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.69■■□□□ 1.76e-6■□□□□ 8.9
PSEN1-203ENST00000394157 NEFMP07197 916 aa25.68■■□□□ 1.7
PSEN1-203ENST00000394157 RXRBP28702 533 aa25.68■■□□□ 1.7
PSEN1-203ENST00000394157 OVOS2A0A0G2JMS6 1433 aa25.68■■□□□ 1.7
PSEN1-203ENST00000394157 MEGF6O75095 1541 aa25.68■■□□□ 1.7
PSEN1-203ENST00000394157 PRKAR2BP31323 418 aa25.67■■□□□ 1.7
PSEN1-203ENST00000394157 FAM98CQ17RN3 349 aaKnown RBP25.67■■□□□ 1.7
PSEN1-203ENST00000394157 AMOTQ4VCS5 1084 aa25.67■■□□□ 1.7
PSEN1-203ENST00000394157 THSD7AQ9UPZ6 1657 aa25.66■■□□□ 1.7
PSEN1-203ENST00000394157 POTEAQ6S8J7 498 aa25.65■■□□□ 1.7
PSEN1-203ENST00000394157 PLEKHO1Q53GL0 409 aaPredicted RBP25.64■■□□□ 1.7
PSEN1-203ENST00000394157 FAM9BQ8IZU0 186 aa25.64■■□□□ 1.7
PSEN1-203ENST00000394157 PLEKHF1Q96S99 279 aa25.64■■□□□ 1.7
PSEN1-203ENST00000394157 SPG7Q9UQ90 795 aa25.64■■□□□ 1.7
PSEN1-203ENST00000394157 RUNDC1Q96C34 613 aa25.63■■□□□ 1.69
PSEN1-203ENST00000394157 PKD1L3Q7Z443 1732 aa25.63■■□□□ 1.69
PSEN1-203ENST00000394157 MAPK8IP3Q9UPT6 1336 aa25.63■■□□□ 1.69
PSEN1-203ENST00000394157 EXOC5O00471 708 aa25.62■■□□□ 1.69
PSEN1-203ENST00000394157 ZCRB1Q8TBF4 217 aaKnown RBP25.62■■□□□ 1.69
PSEN1-203ENST00000394157 DDB1Q16531 1140 aa25.61■■□□□ 1.69
PSEN1-203ENST00000394157 TNS2Q63HR2 1409 aa25.61■■□□□ 1.69
PSEN1-203ENST00000394157 SEPT12Q8IYM1 358 aa25.59■■□□□ 1.69
PSEN1-203ENST00000394157 GAS2L2Q8NHY3 880 aa25.59■■□□□ 1.69
PSEN1-203ENST00000394157 PCDH11XQ9BZA7 1347 aa25.59■■□□□ 1.69
PSEN1-203ENST00000394157 PCDH11YQ9BZA8 1340 aa25.59■■□□□ 1.69
PSEN1-203ENST00000394157 LRRC37A3O60309 1634 aa25.59■■□□□ 1.69
PSEN1-203ENST00000394157 A0A0G2JS52 829 aa25.58■■□□□ 1.69
PSEN1-203ENST00000394157 MYT1Q01538 1121 aa25.58■■□□□ 1.69
PSEN1-203ENST00000394157 PHACTR3Q96KR7 559 aa25.58■■□□□ 1.69
PSEN1-203ENST00000394157 MTHFSDQ2M296 383 aaKnown RBP25.55■■□□□ 1.68
PSEN1-203ENST00000394157 CCDC146Q8IYE0 955 aa25.55■■□□□ 1.68
PSEN1-203ENST00000394157 PDE3BQ13370 1112 aa25.54■■□□□ 1.68
PSEN1-203ENST00000394157 ZNF530Q6P9A1 599 aaPredicted RBP25.54■■□□□ 1.68
PSEN1-203ENST00000394157 IFNL2Q8IZJ0 200 aa25.54■■□□□ 1.68
PSEN1-203ENST00000394157 KCNA4P22459 653 aa25.53■■□□□ 1.68
PSEN1-203ENST00000394157 NFE2L2Q16236 605 aa25.53■■□□□ 1.68
PSEN1-203ENST00000394157 RGS12O14924 1447 aa25.53■■□□□ 1.68
PSEN1-203ENST00000394157 SHANK3Q9BYB0 1731 aa25.52■■□□□ 1.68
PSEN1-203ENST00000394157 HSP90AB1P08238 724 aaKnown RBP25.52■■□□□ 1.68
PSEN1-203ENST00000394157 AKAP4Q5JQC9 854 aa25.52■■□□□ 1.68
PSEN1-203ENST00000394157 C1orf141Q5JVX7 400 aa25.52■■□□□ 1.68
PSEN1-203ENST00000394157 NGEFQ8N5V2 710 aa25.52■■□□□ 1.68
PSEN1-203ENST00000394157 PHKG2P15735 406 aa25.51■■□□□ 1.67
PSEN1-203ENST00000394157 CYP27B1O15528 508 aa25.5■■□□□ 1.67
PSEN1-203ENST00000394157 HTATSF1O43719 755 aaKnown RBP25.5■■□□□ 1.67
PSEN1-203ENST00000394157 DDX54Q8TDD1 881 aaKnown RBP25.5■■□□□ 1.67
PSEN1-203ENST00000394157 APAF1O14727 1248 aa25.49■■□□□ 1.67
PSEN1-203ENST00000394157 TMPOP42166 694 aaKnown RBP25.49■■□□□ 1.67
PSEN1-203ENST00000394157 NKX1-1Q15270 411 aaPredicted RBP25.49■■□□□ 1.67
PSEN1-203ENST00000394157 MAP3K5Q99683 1374 aa25.48■■□□□ 1.67
PSEN1-203ENST00000394157 GNAT3A8MTJ3 354 aa25.48■■□□□ 1.67
PSEN1-203ENST00000394157 LMOD3Q0VAK6 560 aa25.48■■□□□ 1.67
PSEN1-203ENST00000394157 KRT27Q7Z3Y8 459 aa25.48■■□□□ 1.67
PSEN1-203ENST00000394157 MARCH10Q8NA82 808 aaPredicted RBP25.48■■□□□ 1.67
PSEN1-203ENST00000394157 BCL9O00512 1426 aa25.47■■□□□ 1.67
PSEN1-203ENST00000394157 DCAF5Q96JK2 942 aa25.46■■□□□ 1.67
PSEN1-203ENST00000394157 BRWD3Q6RI45 1802 aa25.46■■□□□ 1.67
PSEN1-203ENST00000394157 RIPK4P57078 832 aa25.45■■□□□ 1.66
PSEN1-203ENST00000394157 RTF1Q92541 710 aaKnown RBP25.44■■□□□ 1.66
PSEN1-203ENST00000394157 CCDC27Q2M243 656 aa25.43■■□□□ 1.66
PSEN1-203ENST00000394157 DLG5Q8TDM6 1919 aa25.43■■□□□ 1.66
PSEN1-203ENST00000394157 ADAMTS7Q9UKP4 1686 aa25.42■■□□□ 1.66
PSEN1-203ENST00000394157 FAM196AQ6ZSG2 479 aa25.41■■□□□ 1.66
PSEN1-203ENST00000394157 NEUROD2Q15784 382 aa25.4■■□□□ 1.66
PSEN1-203ENST00000394157 RRP7AQ9Y3A4 280 aaKnown RBP25.4■■□□□ 1.66
PSEN1-203ENST00000394157 ERVV-2B6SEH9 535 aa25.39■■□□□ 1.66
PSEN1-203ENST00000394157 MPRIPQ6WCQ1 1025 aa25.39■■□□□ 1.66
PSEN1-203ENST00000394157 CEMIPQ8WUJ3 1361 aa25.39■■□□□ 1.65
PSEN1-203ENST00000394157 KDM6AO15550 1401 aaPredicted RBP25.38■■□□□ 1.65
PSEN1-203ENST00000394157 RNMTO43148 476 aaKnown RBP25.38■■□□□ 1.65
PSEN1-203ENST00000394157 RNF216Q9NWF9 866 aaPredicted RBP25.38■■□□□ 1.65
PSEN1-203ENST00000394157 SCN11AQ9UI33 1791 aa25.38■■□□□ 1.65
PSEN1-203ENST00000394157 TRIM35Q9UPQ4 493 aa25.37■■□□□ 1.65
PSEN1-203ENST00000394157 CALD1Q05682 793 aaKnown RBP25.36■■□□□ 1.65
PSEN1-203ENST00000394157 IL17REQ8NFR9 667 aa25.36■■□□□ 1.65
PSEN1-203ENST00000394157 LGR6Q9HBX8 967 aa25.34■■□□□ 1.65
PSEN1-203ENST00000394157 MRC1P22897 1456 aa25.34■■□□□ 1.65
PSEN1-203ENST00000394157 VIRMAQ69YN4 1812 aaKnown RBP25.33■■□□□ 1.65
PSEN1-203ENST00000394157 MCM10Q7L590 875 aa25.33■■□□□ 1.65
PSEN1-203ENST00000394157 WWC1Q8IX03 1113 aa25.33■■□□□ 1.65
PSEN1-203ENST00000394157 DOT1LQ8TEK3 1739 aa25.32■■□□□ 1.64
PSEN1-203ENST00000394157 CABP4P57796 275 aa25.32■■□□□ 1.64
PSEN1-203ENST00000394157 HNRNPUQ00839 825 aaKnown RBP eCLIP25.32■■□□□ 1.64
PSEN1-203ENST00000394157 TEFQ10587 303 aa25.32■■□□□ 1.64
PSEN1-203ENST00000394157 TOGARAM1Q9Y4F4 1720 aa25.32■■□□□ 1.64
PSEN1-203ENST00000394157 NPM3O75607 178 aaKnown RBP25.31■■□□□ 1.64
PSEN1-203ENST00000394157 HOXD11P31277 338 aaPredicted RBP25.31■■□□□ 1.64
PSEN1-203ENST00000394157 FAM182BQ5T319 152 aa25.31■■□□□ 1.64
PSEN1-203ENST00000394157 SLC52A2Q9HAB3 445 aa25.31■■□□□ 1.64
PSEN1-203ENST00000394157 NHSQ6T4R5 1651 aa25.3■■□□□ 1.64
PSEN1-203ENST00000394157 DCTN1Q14203 1278 aa25.3■■□□□ 1.64
PSEN1-203ENST00000394157 WDR63Q8IWG1 891 aa25.3■■□□□ 1.64
PSEN1-203ENST00000394157 TMOD3Q9NYL9 352 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms