RNA–Protein interactions for RNA: ENST00000394083.6

GAPVD1-204, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 4,747 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-204ENST00000394083 NBPF6Q5VWK0 638 aa11.06□□□□□ -0.64
GAPVD1-204ENST00000394083 NBPF4Q96M43 638 aa11.06□□□□□ -0.64
GAPVD1-204ENST00000394083 SBNO1A3KN83 1393 aa11.05□□□□□ -0.64
GAPVD1-204ENST00000394083 IL16Q14005 1332 aa11.05□□□□□ -0.64
GAPVD1-204ENST00000394083 SLC24A1O60721 1099 aa11.05□□□□□ -0.64
GAPVD1-204ENST00000394083 PRAMEF22A3QJZ6 481 aa11.05□□□□□ -0.64
GAPVD1-204ENST00000394083 KCNQ3O43525 872 aa11.05□□□□□ -0.64
GAPVD1-204ENST00000394083 HEG1Q9ULI3 1381 aa11.04□□□□□ -0.64
GAPVD1-204ENST00000394083 MVPQ14764 893 aaKnown RBP11.04□□□□□ -0.64
GAPVD1-204ENST00000394083 KIF2CQ99661 725 aa11.04□□□□□ -0.64
GAPVD1-204ENST00000394083 ARHGEF10O15013 1369 aa11.04□□□□□ -0.64
GAPVD1-204ENST00000394083 KDM6AO15550 1401 aaPredicted RBP11.04□□□□□ -0.64
GAPVD1-204ENST00000394083 MYO5AQ9Y4I1 1855 aaKnown RBP11.04□□□□□ -0.64
GAPVD1-204ENST00000394083 ELL2O00472 640 aaPredicted RBP11.03□□□□□ -0.64
GAPVD1-204ENST00000394083 SOX12O15370 315 aa11.03□□□□□ -0.64
GAPVD1-204ENST00000394083 LRRC59Q96AG4 307 aaKnown RBP11.03□□□□□ -0.64
GAPVD1-204ENST00000394083 HDGFL2Q7Z4V5 671 aaPredicted RBP11.03□□□□□ -0.64
GAPVD1-204ENST00000394083 C1orf115Q9H7X2 142 aa11.03□□□□□ -0.64
GAPVD1-204ENST00000394083 LAMB4A4D0S4 1761 aa11.02□□□□□ -0.65
GAPVD1-204ENST00000394083 SLC4A3P48751 1232 aa11.02□□□□□ -0.65
GAPVD1-204ENST00000394083 HSPA2P54652 639 aa11.02□□□□□ -0.65
GAPVD1-204ENST00000394083 FRAT1Q92837 279 aaPredicted RBP11.02□□□□□ -0.65
GAPVD1-204ENST00000394083 SLIT2O94813 1529 aa11.02□□□□□ -0.65
GAPVD1-204ENST00000394083 LGR6Q9HBX8 967 aa11.01□□□□□ -0.65
GAPVD1-204ENST00000394083 FLT4P35916 1363 aa11.01□□□□□ -0.65
GAPVD1-204ENST00000394083 AFDNP55196 1824 aaKnown RBP11.01□□□□□ -0.65
GAPVD1-204ENST00000394083 LRP10Q7Z4F1 713 aa11.01□□□□□ -0.65
GAPVD1-204ENST00000394083 THEMISQ8N1K5 641 aaPredicted RBP11.01□□□□□ -0.65
GAPVD1-204ENST00000394083 ATF7IPQ6VMQ6 1270 aa11□□□□□ -0.65
GAPVD1-204ENST00000394083 OTUD7AQ8TE49 926 aaPredicted RBP11□□□□□ -0.65
GAPVD1-204ENST00000394083 CFAP44Q96MT7 982 aa11□□□□□ -0.65
GAPVD1-204ENST00000394083 MRC1P22897 1456 aa11□□□□□ -0.65
GAPVD1-204ENST00000394083 IL25Q9H293 177 aa10.99□□□□□ -0.65
GAPVD1-204ENST00000394083 COL9A3Q14050 684 aaPredicted RBP10.99□□□□□ -0.65
GAPVD1-204ENST00000394083 ZNF692Q9BU19 519 aaPredicted RBP10.99□□□□□ -0.65
GAPVD1-204ENST00000394083 NRAPQ86VF7 1730 aa10.99□□□□□ -0.65
GAPVD1-204ENST00000394083 CD2BP2O95400 341 aaKnown RBP10.99□□□□□ -0.65
GAPVD1-204ENST00000394083 SMC5Q8IY18 1101 aa10.99□□□□□ -0.65
GAPVD1-204ENST00000394083 COG3Q96JB2 828 aa10.99□□□□□ -0.65
GAPVD1-204ENST00000394083 SALL3Q9BXA9 1300 aa10.98□□□□□ -0.65
GAPVD1-204ENST00000394083 PELP1Q8IZL8 1130 aaKnown RBP10.98□□□□□ -0.65
GAPVD1-204ENST00000394083 ANP32EQ9BTT0 268 aa10.98□□□□□ -0.65
GAPVD1-204ENST00000394083 PDZRN3Q9UPQ7 1066 aa10.98□□□□□ -0.65
GAPVD1-204ENST00000394083 CENPQQ7L2Z9 268 aaPredicted RBP10.98□□□□□ -0.65
GAPVD1-204ENST00000394083 TTC21AQ8NDW8 1320 aa10.97□□□□□ -0.65
GAPVD1-204ENST00000394083 GSPT1P15170 499 aaKnown RBP10.97□□□□□ -0.65
GAPVD1-204ENST00000394083 ARHGEF25Q86VW2 580 aa10.97□□□□□ -0.65
GAPVD1-204ENST00000394083 C16orf71Q8IYS4 520 aaPredicted RBP10.97□□□□□ -0.65
GAPVD1-204ENST00000394083 IFT57Q9NWB7 429 aa10.97□□□□□ -0.65
GAPVD1-204ENST00000394083 MYH14Q7Z406 1995 aaKnown RBP10.96□□□□□ -0.65
GAPVD1-204ENST00000394083 PHLPP1O60346 1717 aa10.96□□□□□ -0.65
GAPVD1-204ENST00000394083 KCPQ6ZWJ8 1503 aa10.96□□□□□ -0.65
GAPVD1-204ENST00000394083 TMEM94Q12767 1356 aa10.96□□□□□ -0.66
GAPVD1-204ENST00000394083 RTL1A6NKG5 1358 aa10.96□□□□□ -0.66
GAPVD1-204ENST00000394083 DDX60Q8IY21 1712 aaKnown RBP10.95□□□□□ -0.66
GAPVD1-204ENST00000394083 NGEFQ8N5V2 710 aa10.95□□□□□ -0.66
GAPVD1-204ENST00000394083 ANTXR1Q9H6X2 564 aa10.95□□□□□ -0.66
GAPVD1-204ENST00000394083 TCHHQ07283 1943 aa10.95□□□□□ -0.66
GAPVD1-204ENST00000394083 LTBP4Q8N2S1 1624 aa10.95□□□□□ -0.66
GAPVD1-204ENST00000394083 A0A1B0GUL6 1792 aa10.95□□□□□ -0.66
GAPVD1-204ENST00000394083 LAMA4Q16363 1823 aa10.95□□□□□ -0.66
GAPVD1-204ENST00000394083 HDAC1Q13547 482 aaPredicted RBP10.94□□□□□ -0.66
GAPVD1-204ENST00000394083 TAF1P21675 1872 aa10.94□□□□□ -0.66
GAPVD1-204ENST00000394083 PROSER3Q2NL68 480 aa10.94□□□□□ -0.66
GAPVD1-204ENST00000394083 CABLES1Q8TDN4 633 aa10.94□□□□□ -0.66
GAPVD1-204ENST00000394083 F6X3S4 739 aa10.94□□□□□ -0.66
GAPVD1-204ENST00000394083 MS4A1P11836 297 aa10.94□□□□□ -0.66
GAPVD1-204ENST00000394083 PDIA6Q15084 440 aa10.94□□□□□ -0.66
GAPVD1-204ENST00000394083 PHF8Q9UPP1 1060 aa10.94□□□□□ -0.66
GAPVD1-204ENST00000394083 RGS3P49796 1198 aa10.93□□□□□ -0.66
GAPVD1-204ENST00000394083 DZIP1LQ8IYY4 767 aaKnown RBP10.93□□□□□ -0.66
GAPVD1-204ENST00000394083 KAZALD1Q96I82 304 aa10.93□□□□□ -0.66
GAPVD1-204ENST00000394083 ROBO1Q9Y6N7 1651 aa10.93□□□□□ -0.66
GAPVD1-204ENST00000394083 ADCY9O60503 1353 aa10.93□□□□□ -0.66
GAPVD1-204ENST00000394083 KIAA0232Q92628 1395 aa10.93□□□□□ -0.66
GAPVD1-204ENST00000394083 PLCH1Q4KWH8 1693 aa10.93□□□□□ -0.66
GAPVD1-204ENST00000394083 MEIS3Q99687 375 aa10.93□□□□□ -0.66
GAPVD1-204ENST00000394083 ABCC6O95255 1503 aa10.93□□□□□ -0.66
GAPVD1-204ENST00000394083 COL22A1Q8NFW1 1626 aaPredicted RBP10.92□□□□□ -0.66
GAPVD1-204ENST00000394083 TWISTNBQ3B726 338 aaPredicted RBP10.92□□□□□ -0.66
GAPVD1-204ENST00000394083 ALDH1L2Q3SY69 923 aa10.92□□□□□ -0.66
GAPVD1-204ENST00000394083 SMC4Q9NTJ3 1288 aa10.92□□□□□ -0.66
GAPVD1-204ENST00000394083 DDIT3P35638 169 aa10.92□□□□□ -0.66
GAPVD1-204ENST00000394083 IPO9Q96P70 1041 aaKnown RBP10.92□□□□□ -0.66
GAPVD1-204ENST00000394083 PHAXQ9H814 394 aaKnown RBP10.92□□□□□ -0.66
GAPVD1-204ENST00000394083 NLRP6P59044 892 aa10.92□□□□□ -0.66
GAPVD1-204ENST00000394083 ZNF335Q9H4Z2 1342 aaPredicted RBP10.91□□□□□ -0.66
GAPVD1-204ENST00000394083 CFAP53Q96M91 514 aa10.91□□□□□ -0.66
GAPVD1-204ENST00000394083 GCP02774 474 aa10.91□□□□□ -0.66
GAPVD1-204ENST00000394083 NUCB1Q02818 461 aa10.91□□□□□ -0.66
GAPVD1-204ENST00000394083 ANKLE2Q86XL3 938 aa10.91□□□□□ -0.66
GAPVD1-204ENST00000394083 EID1Q9Y6B2 187 aa10.91□□□□□ -0.66
GAPVD1-204ENST00000394083 INTS3Q68E01 1043 aaKnown RBP10.9□□□□□ -0.66
GAPVD1-204ENST00000394083 ABTB2Q8N961 1025 aa10.9□□□□□ -0.66
GAPVD1-204ENST00000394083 CEP350Q5VT06 3117 aa10.9□□□□□ -0.66
GAPVD1-204ENST00000394083 NCOA3Q9Y6Q9 1424 aa10.9□□□□□ -0.66
GAPVD1-204ENST00000394083 DNAH12Q6ZR08 3092 aa10.9□□□□□ -0.66
GAPVD1-204ENST00000394083 LAMA3Q16787 3333 aa10.9□□□□□ -0.66
GAPVD1-204ENST00000394083 KIF24Q5T7B8 1368 aa10.9□□□□□ -0.66
GAPVD1-204ENST00000394083 ZKSCAN2Q63HK3 967 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms