RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 API5Q9BZZ5 524 aaKnown RBP11.46□□□□□ -0.58
TDP1-202ENST00000393452 GAS2L2Q8NHY3 880 aa11.45□□□□□ -0.58
TDP1-202ENST00000393452 LTN1O94822 1766 aa11.45□□□□□ -0.58
TDP1-202ENST00000393452 LRRC37A3O60309 1634 aa11.45□□□□□ -0.58
TDP1-202ENST00000393452 NFAT5O94916 1531 aa11.44□□□□□ -0.58
TDP1-202ENST00000393452 FOXO3O43524 673 aa11.44□□□□□ -0.58
TDP1-202ENST00000393452 HTATSF1O43719 755 aaKnown RBP11.44□□□□□ -0.58
TDP1-202ENST00000393452 PRKCSHP14314 528 aaPredicted RBP11.44□□□□□ -0.58
TDP1-202ENST00000393452 RGS12O14924 1447 aa11.44□□□□□ -0.58
TDP1-202ENST00000393452 PHRF1Q9P1Y6 1649 aaKnown RBP11.44□□□□□ -0.58
TDP1-202ENST00000393452 SEC24BO95487 1268 aa11.43□□□□□ -0.58
TDP1-202ENST00000393452 NUTM2GQ5VZR2 741 aa11.43□□□□□ -0.58
TDP1-202ENST00000393452 NUCB1Q02818 461 aa11.43□□□□□ -0.58
TDP1-202ENST00000393452 KRT24Q2M2I5 525 aa11.43□□□□□ -0.58
TDP1-202ENST00000393452 RTF1Q92541 710 aaKnown RBP11.42□□□□□ -0.58
TDP1-202ENST00000393452 RBM33Q96EV2 1170 aaKnown RBP11.42□□□□□ -0.58
TDP1-202ENST00000393452 BCL11AQ9H165 835 aa11.42□□□□□ -0.58
TDP1-202ENST00000393452 INTS3Q68E01 1043 aaKnown RBP11.42□□□□□ -0.58
TDP1-202ENST00000393452 PTPRCP08575 1304 aa11.41□□□□□ -0.58
TDP1-202ENST00000393452 ESCO1Q5FWF5 840 aa11.41□□□□□ -0.58
TDP1-202ENST00000393452 IP6K1Q92551 441 aa11.41□□□□□ -0.58
TDP1-202ENST00000393452 GCC1Q96CN9 775 aa11.41□□□□□ -0.58
TDP1-202ENST00000393452 SIRT2Q8IXJ6 389 aa11.4□□□□□ -0.58
TDP1-202ENST00000393452 CACNA1FO60840 1977 aa11.4□□□□□ -0.58
TDP1-202ENST00000393452 GNAT3A8MTJ3 354 aa11.4□□□□□ -0.58
TDP1-202ENST00000393452 PSME1Q06323 249 aa11.4□□□□□ -0.58
TDP1-202ENST00000393452 TSPYL4Q9UJ04 414 aa11.4□□□□□ -0.58
TDP1-202ENST00000393452 MSH6P52701 1360 aa11.39□□□□□ -0.59
TDP1-202ENST00000393452 CHD1LQ86WJ1 897 aa11.39□□□□□ -0.59
TDP1-202ENST00000393452 KCNH5Q8NCM2 988 aa11.39□□□□□ -0.59
TDP1-202ENST00000393452 MAP3K5Q99683 1374 aa11.39□□□□□ -0.59
TDP1-202ENST00000393452 SLIT3O75094 1523 aa11.39□□□□□ -0.59
TDP1-202ENST00000393452 C14orf37Q86TY3 774 aa11.39□□□□□ -0.59
TDP1-202ENST00000393452 BABAM1Q9NWV8 329 aa11.39□□□□□ -0.59
TDP1-202ENST00000393452 MIS18AQ9NYP9 233 aa11.39□□□□□ -0.59
TDP1-202ENST00000393452 TBC1D32Q96NH3 1257 aa11.38□□□□□ -0.59
TDP1-202ENST00000393452 C1orf115Q9H7X2 142 aa11.38□□□□□ -0.59
TDP1-202ENST00000393452 TRPM3Q9HCF6 1732 aaPredicted RBP11.38□□□□□ -0.59
TDP1-202ENST00000393452 NBR1Q14596 966 aa11.38□□□□□ -0.59
TDP1-202ENST00000393452 ORAI2Q96SN7 254 aa11.38□□□□□ -0.59
TDP1-202ENST00000393452 SOS1Q07889 1333 aaPredicted RBP11.38□□□□□ -0.59
TDP1-202ENST00000393452 IL17REQ8NFR9 667 aa11.37□□□□□ -0.59
TDP1-202ENST00000393452 LNPKQ9C0E8 428 aa11.37□□□□□ -0.59
TDP1-202ENST00000393452 SLC4A2P04920 1241 aa11.36□□□□□ -0.59
TDP1-202ENST00000393452 SLC4A3P48751 1232 aa11.36□□□□□ -0.59
TDP1-202ENST00000393452 LTV1Q96GA3 475 aaPredicted RBP11.36□□□□□ -0.59
TDP1-202ENST00000393452 UPF2Q9HAU5 1272 aaKnown RBP11.36□□□□□ -0.59
TDP1-202ENST00000393452 MST1RQ04912 1400 aa11.36□□□□□ -0.59
TDP1-202ENST00000393452 ATP10DQ9P241 1426 aa11.36□□□□□ -0.59
TDP1-202ENST00000393452 KIF1AQ12756 1690 aa11.36□□□□□ -0.59
TDP1-202ENST00000393452 RGPD2P0DJD1 1756 aa11.36□□□□□ -0.59
TDP1-202ENST00000393452 FAM208AQ9UK61 1670 aaKnown RBP11.36□□□□□ -0.59
TDP1-202ENST00000393452 NCAPD2Q15021 1401 aa11.36□□□□□ -0.59
TDP1-202ENST00000393452 CEMIPQ8WUJ3 1361 aa11.36□□□□□ -0.59
TDP1-202ENST00000393452 DAXXQ9UER7 740 aaPredicted RBP11.36□□□□□ -0.59
TDP1-202ENST00000393452 NBPF6Q5VWK0 638 aa11.35□□□□□ -0.59
TDP1-202ENST00000393452 NBPF4Q96M43 638 aa11.35□□□□□ -0.59
TDP1-202ENST00000393452 MED1Q15648 1581 aaPredicted RBP11.35□□□□□ -0.59
TDP1-202ENST00000393452 C1orf167Q5SNV9 1468 aa11.35□□□□□ -0.59
TDP1-202ENST00000393452 TAF7Q15545 349 aaPredicted RBP11.35□□□□□ -0.59
TDP1-202ENST00000393452 ARHGEF25Q86VW2 580 aa11.35□□□□□ -0.59
TDP1-202ENST00000393452 DCTPP1Q9H773 170 aa11.35□□□□□ -0.59
TDP1-202ENST00000393452 USP35Q9P2H5 1018 aa11.35□□□□□ -0.59
TDP1-202ENST00000393452 GCP02774 474 aa11.34□□□□□ -0.59
TDP1-202ENST00000393452 BMP2KLQ5H9B9 411 aa11.34□□□□□ -0.59
TDP1-202ENST00000393452 ANKRD45Q5TZF3 282 aa11.34□□□□□ -0.59
TDP1-202ENST00000393452 PROSER2Q86WR7 435 aaPredicted RBP11.34□□□□□ -0.59
TDP1-202ENST00000393452 RPAP2Q8IXW5 612 aaPredicted RBP11.34□□□□□ -0.59
TDP1-202ENST00000393452 USHBP1Q8N6Y0 703 aa11.34□□□□□ -0.59
TDP1-202ENST00000393452 ANKRD44Q8N8A2 993 aa11.34□□□□□ -0.59
TDP1-202ENST00000393452 C19orf44Q9H6X5 657 aa11.34□□□□□ -0.59
TDP1-202ENST00000393452 LMO7Q8WWI1 1683 aa11.34□□□□□ -0.59
TDP1-202ENST00000393452 G2E3Q7L622 706 aa11.34□□□□□ -0.59
TDP1-202ENST00000393452 CAMTA1Q9Y6Y1 1673 aa11.34□□□□□ -0.59
TDP1-202ENST00000393452 N4BP2Q86UW6 1770 aaPredicted RBP11.33□□□□□ -0.6
TDP1-202ENST00000393452 ALS2Q96Q42 1657 aa11.33□□□□□ -0.6
TDP1-202ENST00000393452 CCDC30Q5VVM6 783 aa11.33□□□□□ -0.6
TDP1-202ENST00000393452 CCT4P50991 539 aaKnown RBP11.32□□□□□ -0.6
TDP1-202ENST00000393452 CEP85Q6P2H3 762 aa11.32□□□□□ -0.6
TDP1-202ENST00000393452 MEIS3Q99687 375 aa11.32□□□□□ -0.6
TDP1-202ENST00000393452 STK31Q9BXU1 1019 aa11.32□□□□□ -0.6
TDP1-202ENST00000393452 KDM3BQ7LBC6 1761 aa11.32□□□□□ -0.6
TDP1-202ENST00000393452 DCCP43146 1447 aa11.32□□□□□ -0.6
TDP1-202ENST00000393452 XPCQ01831 940 aaPredicted RBP11.32□□□□□ -0.6
TDP1-202ENST00000393452 BECN1Q14457 450 aa11.32□□□□□ -0.6
TDP1-202ENST00000393452 RTL5Q5HYW3 569 aaPredicted RBP11.32□□□□□ -0.6
TDP1-202ENST00000393452 NCOA3Q9Y6Q9 1424 aa11.32□□□□□ -0.6
TDP1-202ENST00000393452 STRCP1A6NGW2 1772 aa11.31□□□□□ -0.6
TDP1-202ENST00000393452 KRT28Q7Z3Y7 464 aa11.31□□□□□ -0.6
TDP1-202ENST00000393452 FLIIQ13045 1269 aa11.31□□□□□ -0.6
TDP1-202ENST00000393452 C22orf23Q9BZE7 217 aa11.31□□□□□ -0.6
TDP1-202ENST00000393452 F6X3S4 739 aa11.3□□□□□ -0.6
TDP1-202ENST00000393452 LRRC59Q96AG4 307 aaKnown RBP11.3□□□□□ -0.6
TDP1-202ENST00000393452 MFAP1P55081 439 aaKnown RBP11.3□□□□□ -0.6
TDP1-202ENST00000393452 AMOTQ4VCS5 1084 aa11.3□□□□□ -0.6
TDP1-202ENST00000393452 AKAP4Q5JQC9 854 aa11.3□□□□□ -0.6
TDP1-202ENST00000393452 PXDNLA1KZ92 1463 aa11.3□□□□□ -0.6
TDP1-202ENST00000393452 LMTK3Q96Q04 1460 aa11.3□□□□□ -0.6
TDP1-202ENST00000393452 OVOS2A0A0G2JMS6 1433 aa11.29□□□□□ -0.6
TDP1-202ENST00000393452 HOXB7P09629 217 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms