RNA–Protein interactions for RNA: ENST00000390964.1

SNORA40.3-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 122 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.3-201ENST00000390964 SIRT1Q96EB6 747 aa7.66□□□□□ -1.18
SNORA40.3-201ENST00000390964 AGBL1Q96MI9 1066 aa7.66□□□□□ -1.18
SNORA40.3-201ENST00000390964 ZMYND15Q9H091 742 aa7.66□□□□□ -1.18
SNORA40.3-201ENST00000390964 OSBPL3Q9H4L5 887 aa7.66□□□□□ -1.18
SNORA40.3-201ENST00000390964 ESF1Q9H501 851 aaKnown RBP7.66□□□□□ -1.18
SNORA40.3-201ENST00000390964 ATP5J2-PTCD1G3V325 749 aa7.65□□□□□ -1.18
SNORA40.3-201ENST00000390964 LZTS3O60299 673 aaPredicted RBP7.65□□□□□ -1.18
SNORA40.3-201ENST00000390964 RELBQ01201 579 aa7.65□□□□□ -1.18
SNORA40.3-201ENST00000390964 SOS2Q07890 1332 aaPredicted RBP7.65□□□□□ -1.18
SNORA40.3-201ENST00000390964 CYP2U1Q7Z449 544 aa7.65□□□□□ -1.18
SNORA40.3-201ENST00000390964 GLMNQ92990 594 aa7.65□□□□□ -1.18
SNORA40.3-201ENST00000390964 PIK3CDO00329 1044 aa7.64□□□□□ -1.19
SNORA40.3-201ENST00000390964 SKIP12755 728 aa7.63□□□□□ -1.19
SNORA40.3-201ENST00000390964 OXLD1Q5BKU9 147 aa7.63□□□□□ -1.19
SNORA40.3-201ENST00000390964 ZNF395Q9H8N7 513 aaPredicted RBP7.63□□□□□ -1.19
SNORA40.3-201ENST00000390964 TTLL8A6PVC2 850 aa7.62□□□□□ -1.19
SNORA40.3-201ENST00000390964 GNRH1P01148 92 aa7.62□□□□□ -1.19
SNORA40.3-201ENST00000390964 CALR3Q96L12 384 aaKnown RBP7.62□□□□□ -1.19
SNORA40.3-201ENST00000390964 UCN2Q96RP3 112 aa7.62□□□□□ -1.19
SNORA40.3-201ENST00000390964 MAN1A2O60476 641 aa7.61□□□□□ -1.19
SNORA40.3-201ENST00000390964 EML3Q32P44 896 aa7.61□□□□□ -1.19
SNORA40.3-201ENST00000390964 INSM2Q96T92 566 aaPredicted RBP7.61□□□□□ -1.19
SNORA40.3-201ENST00000390964 A0A1W2PRU2 124 aa7.6□□□□□ -1.19
SNORA40.3-201ENST00000390964 USP17L5A8MUK1 530 aa7.6□□□□□ -1.19
SNORA40.3-201ENST00000390964 ATP9BO43861 1147 aa7.6□□□□□ -1.19
SNORA40.3-201ENST00000390964 GPC1P35052 558 aa7.6□□□□□ -1.19
SNORA40.3-201ENST00000390964 CTSOP43234 321 aaPredicted RBP7.6□□□□□ -1.19
SNORA40.3-201ENST00000390964 CLN3Q13286 438 aa7.6□□□□□ -1.19
SNORA40.3-201ENST00000390964 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.6□□□□□ -1.19
SNORA40.3-201ENST00000390964 PLEKHM2Q8IWE5 1019 aa7.6□□□□□ -1.19
SNORA40.3-201ENST00000390964 POLMQ9NP87 494 aaPredicted RBP7.6□□□□□ -1.19
SNORA40.3-201ENST00000390964 DNMT3LQ9UJW3 386 aa7.6□□□□□ -1.19
SNORA40.3-201ENST00000390964 ZNF777Q9ULD5 760 aaPredicted RBP7.6□□□□□ -1.19
SNORA40.3-201ENST00000390964 RNF144AP50876 292 aaPredicted RBP7.59□□□□□ -1.19
SNORA40.3-201ENST00000390964 NCOA4Q13772 614 aa7.59□□□□□ -1.19
SNORA40.3-201ENST00000390964 TBC1D9Q6ZT07 1266 aa7.59□□□□□ -1.19
SNORA40.3-201ENST00000390964 RNF217Q8TC41 542 aa7.59□□□□□ -1.19
SNORA40.3-201ENST00000390964 ARHGEF10LQ9HCE6 1279 aa7.59□□□□□ -1.19
SNORA40.3-201ENST00000390964 ESCO1Q5FWF5 840 aa7.58□□□□□ -1.2
SNORA40.3-201ENST00000390964 FOXD4L5Q5VV16 416 aaPredicted RBP7.58□□□□□ -1.2
SNORA40.3-201ENST00000390964 NOD1Q9Y239 953 aa7.58□□□□□ -1.2
SNORA40.3-201ENST00000390964 USP17L3A6NCW0 530 aa7.57□□□□□ -1.2
SNORA40.3-201ENST00000390964 USP17L4A6NCW7 530 aa7.57□□□□□ -1.2
SNORA40.3-201ENST00000390964 FIGNL2A6NMB9 653 aa7.57□□□□□ -1.2
SNORA40.3-201ENST00000390964 SOBPA7XYQ1 873 aa7.57□□□□□ -1.2
SNORA40.3-201ENST00000390964 MEN1O00255 615 aa7.57□□□□□ -1.2
SNORA40.3-201ENST00000390964 USP17L2Q6R6M4 530 aa7.57□□□□□ -1.2
SNORA40.3-201ENST00000390964 ERICH6Q7L0X2 663 aa7.57□□□□□ -1.2
SNORA40.3-201ENST00000390964 USP17L1Q7RTZ2 530 aa7.57□□□□□ -1.2
SNORA40.3-201ENST00000390964 NPAS3Q8IXF0 933 aa7.57□□□□□ -1.2
SNORA40.3-201ENST00000390964 XAGE2Q96GT9 111 aa7.57□□□□□ -1.2
SNORA40.3-201ENST00000390964 NLRP3Q96P20 1036 aa7.57□□□□□ -1.2
SNORA40.3-201ENST00000390964 ESYT1Q9BSJ8 1104 aa7.57□□□□□ -1.2
SNORA40.3-201ENST00000390964 DEPDC4Q8N2C3 294 aa7.56□□□□□ -1.2
SNORA40.3-201ENST00000390964 CNKSR1Q969H4 720 aa7.56□□□□□ -1.2
SNORA40.3-201ENST00000390964 PPP1R12CQ9BZL4 782 aa7.56□□□□□ -1.2
SNORA40.3-201ENST00000390964 TFIP11Q9UBB9 837 aaKnown RBP7.56□□□□□ -1.2
SNORA40.3-201ENST00000390964 NXF1Q9UBU9 619 aaKnown RBP7.56□□□□□ -1.2
SNORA40.3-201ENST00000390964 PCDHGA11Q9Y5H2 935 aa7.56□□□□□ -1.2
SNORA40.3-201ENST00000390964 PALM3A6NDB9 673 aaPredicted RBP7.55□□□□□ -1.2
SNORA40.3-201ENST00000390964 WASLO00401 505 aaPredicted RBP7.55□□□□□ -1.2
SNORA40.3-201ENST00000390964 WFS1O76024 890 aa7.55□□□□□ -1.2
SNORA40.3-201ENST00000390964 IL2RAP01589 272 aa7.55□□□□□ -1.2
SNORA40.3-201ENST00000390964 LYSMD3Q7Z3D4 306 aa7.55□□□□□ -1.2
SNORA40.3-201ENST00000390964 C14orf37Q86TY3 774 aa7.55□□□□□ -1.2
SNORA40.3-201ENST00000390964 TRIM50Q86XT4 487 aa7.55□□□□□ -1.2
SNORA40.3-201ENST00000390964 GRIP2Q9C0E4 1043 aa7.55□□□□□ -1.2
SNORA40.3-201ENST00000390964 ETNK1Q9HBU6 452 aa7.55□□□□□ -1.2
SNORA40.3-201ENST00000390964 RAB6BQ9NRW1 208 aa7.55□□□□□ -1.2
SNORA40.3-201ENST00000390964 STK17AQ9UEE5 414 aa7.55□□□□□ -1.2
SNORA40.3-201ENST00000390964 HRH3Q9Y5N1 445 aa7.55□□□□□ -1.2
SNORA40.3-201ENST00000390964 MAFBQ9Y5Q3 323 aaPredicted RBP7.55□□□□□ -1.2
SNORA40.3-201ENST00000390964 TERTO14746 1132 aaKnown RBP7.54□□□□□ -1.2
SNORA40.3-201ENST00000390964 INHAP05111 366 aa7.54□□□□□ -1.2
SNORA40.3-201ENST00000390964 SCNN1DP51172 638 aa7.54□□□□□ -1.2
SNORA40.3-201ENST00000390964 GTF2IP78347 998 aa7.54□□□□□ -1.2
SNORA40.3-201ENST00000390964 ATP1A2P50993 1020 aa7.53□□□□□ -1.2
SNORA40.3-201ENST00000390964 GDF10P55107 478 aa7.53□□□□□ -1.2
SNORA40.3-201ENST00000390964 CENPCQ03188 943 aa7.53□□□□□ -1.2
SNORA40.3-201ENST00000390964 PTSQ03393 145 aa7.53□□□□□ -1.2
SNORA40.3-201ENST00000390964 SLC27A3Q5K4L6 730 aa7.53□□□□□ -1.2
SNORA40.3-201ENST00000390964 MKRN1Q9UHC7 482 aaKnown RBP7.53□□□□□ -1.2
SNORA40.3-201ENST00000390964 NFX1Q12986 1120 aaKnown RBP7.52□□□□□ -1.21
SNORA40.3-201ENST00000390964 WDR44Q5JSH3 913 aa7.52□□□□□ -1.21
SNORA40.3-201ENST00000390964 FHDC1Q9C0D6 1143 aaPredicted RBP7.52□□□□□ -1.21
SNORA40.3-201ENST00000390964 SLC35F4A4IF30 521 aa7.51□□□□□ -1.21
SNORA40.3-201ENST00000390964 TMEM229AB2RXF0 380 aa7.51□□□□□ -1.21
SNORA40.3-201ENST00000390964 SPATA31C2B4DYI2 1134 aa7.51□□□□□ -1.21
SNORA40.3-201ENST00000390964 WIPF1O43516 503 aa7.51□□□□□ -1.21
SNORA40.3-201ENST00000390964 PRICKLE2Q7Z3G6 844 aa7.51□□□□□ -1.21
SNORA40.3-201ENST00000390964 SLC16A10Q8TF71 515 aa7.51□□□□□ -1.21
SNORA40.3-201ENST00000390964 ZSCAN10Q96SZ4 725 aaPredicted RBP7.51□□□□□ -1.21
SNORA40.3-201ENST00000390964 H3BM21 787 aa7.5□□□□□ -1.21
SNORA40.3-201ENST00000390964 ZBTB7BO15156 539 aaPredicted RBP7.5□□□□□ -1.21
SNORA40.3-201ENST00000390964 PPFIA3O75145 1194 aa7.5□□□□□ -1.21
SNORA40.3-201ENST00000390964 STAU1O95793 577 aaKnown RBP7.5□□□□□ -1.21
SNORA40.3-201ENST00000390964 CLDN10P78369 228 aa7.5□□□□□ -1.21
SNORA40.3-201ENST00000390964 INSM1Q01101 510 aaPredicted RBP7.5□□□□□ -1.21
SNORA40.3-201ENST00000390964 PSME1Q06323 249 aa7.5□□□□□ -1.21
SNORA40.3-201ENST00000390964 LARGE2Q8N3Y3 721 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms