RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 TMEM94Q12767 1356 aa23.14■■□□□ 1.29
ACTN4-202ENST00000390009 KIAA0232Q92628 1395 aa23.14■■□□□ 1.29
ACTN4-202ENST00000390009 LRRC37A3O60309 1634 aa23.13■■□□□ 1.29
ACTN4-202ENST00000390009 ZBTB40Q9NUA8 1239 aa23.13■■□□□ 1.29
ACTN4-202ENST00000390009 KRT24Q2M2I5 525 aa23.12■■□□□ 1.29
ACTN4-202ENST00000390009 RGPD2P0DJD1 1756 aa23.12■■□□□ 1.29
ACTN4-202ENST00000390009 HTATSF1O43719 755 aaKnown RBP23.12■■□□□ 1.29
ACTN4-202ENST00000390009 HAP1P54257 671 aaPredicted RBP23.12■■□□□ 1.29
ACTN4-202ENST00000390009 FAM161AQ3B820 660 aa23.12■■□□□ 1.29
ACTN4-202ENST00000390009 KRT28Q7Z3Y7 464 aa23.12■■□□□ 1.29
ACTN4-202ENST00000390009 HSPA2P54652 639 aa23.11■■□□□ 1.29
ACTN4-202ENST00000390009 GCP02774 474 aa23.11■■□□□ 1.29
ACTN4-202ENST00000390009 MST1RQ04912 1400 aa23.11■■□□□ 1.29
ACTN4-202ENST00000390009 DCCP43146 1447 aa23.1■■□□□ 1.29
ACTN4-202ENST00000390009 ZBTB7CA1YPR0 619 aa23.1■■□□□ 1.29
ACTN4-202ENST00000390009 ATF3P18847 181 aa23.1■■□□□ 1.29
ACTN4-202ENST00000390009 LMOD2Q6P5Q4 547 aa23.1■■□□□ 1.29
ACTN4-202ENST00000390009 USHBP1Q8N6Y0 703 aa23.1■■□□□ 1.29
ACTN4-202ENST00000390009 NCOA3Q9Y6Q9 1424 aa23.09■■□□□ 1.29
ACTN4-202ENST00000390009 ABCC4O15439 1325 aa23.09■■□□□ 1.29
ACTN4-202ENST00000390009 GNAT3A8MTJ3 354 aa23.09■■□□□ 1.29
ACTN4-202ENST00000390009 HDAC1Q13547 482 aaPredicted RBP23.09■■□□□ 1.29
ACTN4-202ENST00000390009 VIRMAQ69YN4 1812 aaKnown RBP23.09■■□□□ 1.29
ACTN4-202ENST00000390009 C8orf34Q49A92 452 aa23.09■■□□□ 1.29
ACTN4-202ENST00000390009 MIS18AQ9NYP9 233 aa23.09■■□□□ 1.29
ACTN4-202ENST00000390009 USP19O94966 1318 aa23.08■■□□□ 1.29
ACTN4-202ENST00000390009 ALS2Q96Q42 1657 aa23.08■■□□□ 1.29
ACTN4-202ENST00000390009 TSPYL4Q9UJ04 414 aa23.08■■□□□ 1.29
ACTN4-202ENST00000390009 PDZRN3Q9UPQ7 1066 aa23.08■■□□□ 1.29
ACTN4-202ENST00000390009 MAP3K5Q99683 1374 aa23.08■■□□□ 1.28
ACTN4-202ENST00000390009 NBPF6Q5VWK0 638 aa23.08■■□□□ 1.28
ACTN4-202ENST00000390009 NPM2Q86SE8 214 aaKnown RBP23.08■■□□□ 1.28
ACTN4-202ENST00000390009 ARHGEF25Q86VW2 580 aa23.08■■□□□ 1.28
ACTN4-202ENST00000390009 NBPF4Q96M43 638 aa23.08■■□□□ 1.28
ACTN4-202ENST00000390009 API5Q9BZZ5 524 aaKnown RBP23.08■■□□□ 1.28
ACTN4-202ENST00000390009 MSH6P52701 1360 aa23.07■■□□□ 1.28
ACTN4-202ENST00000390009 PLEKHG5O94827 1062 aa23.06■■□□□ 1.28
ACTN4-202ENST00000390009 IPO9Q96P70 1041 aaKnown RBP23.06■■□□□ 1.28
ACTN4-202ENST00000390009 ZBTB7BO15156 539 aaPredicted RBP23.05■■□□□ 1.28
ACTN4-202ENST00000390009 CHMP4BQ9H444 224 aaKnown RBP23.05■■□□□ 1.28
ACTN4-202ENST00000390009 IL17REQ8NFR9 667 aa23.03■■□□□ 1.28
ACTN4-202ENST00000390009 XIRP1Q702N8 1843 aaKnown RBP23.02■■□□□ 1.28
ACTN4-202ENST00000390009 CADPS2Q86UW7 1296 aa23.02■■□□□ 1.28
ACTN4-202ENST00000390009 LRRC59Q96AG4 307 aaKnown RBP23.02■■□□□ 1.28
ACTN4-202ENST00000390009 RGPD5Q99666 1765 aa23.01■■□□□ 1.27
ACTN4-202ENST00000390009 ERICH6Q7L0X2 663 aa23■■□□□ 1.27
ACTN4-202ENST00000390009 MED1Q15648 1581 aaPredicted RBP23■■□□□ 1.27
ACTN4-202ENST00000390009 STRCQ7RTU9 1775 aa23■■□□□ 1.27
ACTN4-202ENST00000390009 RGS12O14924 1447 aa23■■□□□ 1.27
ACTN4-202ENST00000390009 SMC5Q8IY18 1101 aa23■■□□□ 1.27
ACTN4-202ENST00000390009 LMTK3Q96Q04 1460 aa23■■□□□ 1.27
ACTN4-202ENST00000390009 NCAPD2Q15021 1401 aa22.99■■□□□ 1.27
ACTN4-202ENST00000390009 CAMTA1Q9Y6Y1 1673 aa22.99■■□□□ 1.27
ACTN4-202ENST00000390009 DDX17Q92841 729 aaKnown RBP22.99■■□□□ 1.27
ACTN4-202ENST00000390009 NOP58Q9Y2X3 529 aaKnown RBP22.99■■□□□ 1.27
ACTN4-202ENST00000390009 PTPRCP08575 1304 aa22.98■■□□□ 1.27
ACTN4-202ENST00000390009 ANKRD24Q8TF21 1146 aa22.98■■□□□ 1.27
ACTN4-202ENST00000390009 LMO7Q8WWI1 1683 aa22.98■■□□□ 1.27
ACTN4-202ENST00000390009 KDM4FA0A1W2PPD8 638 aa22.97■■□□□ 1.27
ACTN4-202ENST00000390009 SLC4A2P04920 1241 aa22.97■■□□□ 1.27
ACTN4-202ENST00000390009 TAF7Q15545 349 aaPredicted RBP22.97■■□□□ 1.27
ACTN4-202ENST00000390009 BABAM1Q9NWV8 329 aa22.97■■□□□ 1.27
ACTN4-202ENST00000390009 INTS3Q68E01 1043 aaKnown RBP22.96■■□□□ 1.27
ACTN4-202ENST00000390009 BCL11AQ9H165 835 aa22.96■■□□□ 1.27
ACTN4-202ENST00000390009 C1orf115Q9H7X2 142 aa22.96■■□□□ 1.27
ACTN4-202ENST00000390009 AXIN2Q9Y2T1 843 aa22.96■■□□□ 1.27
ACTN4-202ENST00000390009 NPHP3Q7Z494 1330 aa22.96■■□□□ 1.27
ACTN4-202ENST00000390009 CEMIPQ8WUJ3 1361 aa22.96■■□□□ 1.27
ACTN4-202ENST00000390009 FAM208AQ9UK61 1670 aaKnown RBP22.95■■□□□ 1.27
ACTN4-202ENST00000390009 CACNA1FO60840 1977 aa22.95■■□□□ 1.26
ACTN4-202ENST00000390009 ZC3H6P61129 1189 aaKnown RBP22.94■■□□□ 1.26
ACTN4-202ENST00000390009 ZBTB47Q9UFB7 747 aaPredicted RBP22.93■■□□□ 1.26
ACTN4-202ENST00000390009 PLEKHO1Q53GL0 409 aaPredicted RBP22.93■■□□□ 1.26
ACTN4-202ENST00000390009 TNS3Q68CZ2 1445 aa22.92■■□□□ 1.26
ACTN4-202ENST00000390009 SOS1Q07889 1333 aaPredicted RBP22.92■■□□□ 1.26
ACTN4-202ENST00000390009 AMOTQ4VCS5 1084 aa22.91■■□□□ 1.26
ACTN4-202ENST00000390009 AKAP4Q5JQC9 854 aa22.91■■□□□ 1.26
ACTN4-202ENST00000390009 ZNF530Q6P9A1 599 aaPredicted RBP22.91■■□□□ 1.26
ACTN4-202ENST00000390009 PXDNQ92626 1479 aa22.91■■□□□ 1.26
ACTN4-202ENST00000390009 ERBB3P21860 1342 aa22.91■■□□□ 1.26
ACTN4-202ENST00000390009 STK31Q9BXU1 1019 aa22.91■■□□□ 1.26
ACTN4-202ENST00000390009 KDM3BQ7LBC6 1761 aa22.91■■□□□ 1.26
ACTN4-202ENST00000390009 NUCB1Q02818 461 aa22.9■■□□□ 1.26
ACTN4-202ENST00000390009 G2E3Q7L622 706 aa22.9■■□□□ 1.26
ACTN4-202ENST00000390009 LGR6Q9HBX8 967 aa22.9■■□□□ 1.26
ACTN4-202ENST00000390009 CCDC30Q5VVM6 783 aa22.9■■□□□ 1.26
ACTN4-202ENST00000390009 SIRT2Q8IXJ6 389 aa22.9■■□□□ 1.26
ACTN4-202ENST00000390009 CRYBG1Q9Y4K1 1723 aa22.89■■□□□ 1.26
ACTN4-202ENST00000390009 COL18A1P39060 1754 aa22.89■■□□□ 1.25
ACTN4-202ENST00000390009 GCC1Q96CN9 775 aa22.88■■□□□ 1.25
ACTN4-202ENST00000390009 DDRGK1Q96HY6 314 aa22.87■■□□□ 1.25
ACTN4-202ENST00000390009 SPATA31A3Q5VYP0 1347 aa22.86■■□□□ 1.25
ACTN4-202ENST00000390009 C1orf141Q5JVX7 400 aa22.86■■□□□ 1.25
ACTN4-202ENST00000390009 CHD1LQ86WJ1 897 aa22.86■■□□□ 1.25
ACTN4-202ENST00000390009 CABLES1Q8TDN4 633 aa22.86■■□□□ 1.25
ACTN4-202ENST00000390009 MPRIPQ6WCQ1 1025 aa22.85■■□□□ 1.25
ACTN4-202ENST00000390009 TEFQ10587 303 aa22.85■■□□□ 1.25
ACTN4-202ENST00000390009 BRINP3Q76B58 766 aa22.85■■□□□ 1.25
ACTN4-202ENST00000390009 NECTIN2Q92692 538 aa22.85■■□□□ 1.25
ACTN4-202ENST00000390009 LNPKQ9C0E8 428 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms