RNA–Protein interactions for RNA: ENST00000389995.4

SOD1-202, Transcript of superoxide dismutase 1, humanhuman

TSL 3 BASIC

Gene SOD1, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-202ENST00000389995 TMC1Q8TDI8 760 aa16.9■□□□□ 0.3
SOD1-202ENST00000389995 SIN3AQ96ST3 1273 aa16.9■□□□□ 0.3
SOD1-202ENST00000389995 TAF1LQ8IZX4 1826 aa16.9■□□□□ 0.3
SOD1-202ENST00000389995 NSD2O96028 1365 aa16.89■□□□□ 0.3
SOD1-202ENST00000389995 ATP10DQ9P241 1426 aa16.89■□□□□ 0.29
SOD1-202ENST00000389995 C5P01031 1676 aa16.89■□□□□ 0.29
SOD1-202ENST00000389995 COL23A1Q86Y22 540 aaPredicted RBP16.88■□□□□ 0.29
SOD1-202ENST00000389995 SLC12A5Q9H2X9 1139 aa16.88■□□□□ 0.29
SOD1-202ENST00000389995 FBLN1P23142 703 aa16.87■□□□□ 0.29
SOD1-202ENST00000389995 ZNF526Q8TF50 670 aaPredicted RBP16.87■□□□□ 0.29
SOD1-202ENST00000389995 CCNL1Q9UK58 526 aaPredicted RBP16.87■□□□□ 0.29
SOD1-202ENST00000389995 ANKRD36BQ8N2N9 1353 aa16.87■□□□□ 0.29
SOD1-202ENST00000389995 GRIN3BO60391 1043 aa16.86■□□□□ 0.29
SOD1-202ENST00000389995 NEUROD1Q13562 356 aa16.86■□□□□ 0.29
SOD1-202ENST00000389995 IP6K1Q92551 441 aa16.85■□□□□ 0.29
SOD1-202ENST00000389995 WWC3Q9ULE0 1092 aa16.85■□□□□ 0.29
SOD1-202ENST00000389995 HDGFL2Q7Z4V5 671 aaPredicted RBP16.84■□□□□ 0.29
SOD1-202ENST00000389995 MEGF6O75095 1541 aa16.84■□□□□ 0.29
SOD1-202ENST00000389995 A0A1W2PP64 1363 aa16.83■□□□□ 0.28
SOD1-202ENST00000389995 ITGB4P16144 1822 aa16.83■□□□□ 0.28
SOD1-202ENST00000389995 EDC4Q6P2E9 1401 aaKnown RBP16.83■□□□□ 0.28
SOD1-202ENST00000389995 GPBP1L1Q9HC44 474 aaPredicted RBP16.83■□□□□ 0.28
SOD1-202ENST00000389995 ZCRB1Q8TBF4 217 aaKnown RBP16.82■□□□□ 0.28
SOD1-202ENST00000389995 UBR3Q6ZT12 1888 aa16.8■□□□□ 0.28
SOD1-202ENST00000389995 USP47Q96K76 1375 aa16.8■□□□□ 0.28
SOD1-202ENST00000389995 MAP3K19Q56UN5 1328 aa16.8■□□□□ 0.28
SOD1-202ENST00000389995 TOGARAM1Q9Y4F4 1720 aa16.8■□□□□ 0.28
SOD1-202ENST00000389995 HOXC9P31274 260 aa16.8■□□□□ 0.28
SOD1-202ENST00000389995 SMIM5Q71RC9 77 aa16.8■□□□□ 0.28
SOD1-202ENST00000389995 USHBP1Q8N6Y0 703 aa16.8■□□□□ 0.28
SOD1-202ENST00000389995 ADCY9O60503 1353 aa16.78■□□□□ 0.28
SOD1-202ENST00000389995 HSPA6P17066 643 aa16.78■□□□□ 0.28
SOD1-202ENST00000389995 AMPHP49418 695 aa16.78■□□□□ 0.28
SOD1-202ENST00000389995 C4BP0C0L5 1744 aa16.78■□□□□ 0.28
SOD1-202ENST00000389995 AMIGO3Q86WK7 504 aa16.77■□□□□ 0.28
SOD1-202ENST00000389995 CARD11Q9BXL7 1154 aa16.77■□□□□ 0.28
SOD1-202ENST00000389995 TERF2IPQ9NYB0 399 aa16.77■□□□□ 0.28
SOD1-202ENST00000389995 CD2APQ9Y5K6 639 aa16.77■□□□□ 0.28
SOD1-202ENST00000389995 NBPF6Q5VWK0 638 aa16.76■□□□□ 0.27
SOD1-202ENST00000389995 NBPF4Q96M43 638 aa16.76■□□□□ 0.27
SOD1-202ENST00000389995 N4BP2Q86UW6 1770 aaPredicted RBP16.74■□□□□ 0.27
SOD1-202ENST00000389995 RRS1Q15050 365 aaKnown RBP16.74■□□□□ 0.27
SOD1-202ENST00000389995 COG3Q96JB2 828 aa16.74■□□□□ 0.27
SOD1-202ENST00000389995 IGSF1Q8N6C5 1336 aa16.73■□□□□ 0.27
SOD1-202ENST00000389995 PHF14O94880 888 aa16.73■□□□□ 0.27
SOD1-202ENST00000389995 MPRIPQ6WCQ1 1025 aa16.73■□□□□ 0.27
SOD1-202ENST00000389995 PALLDQ8WX93 1383 aa16.73■□□□□ 0.27
SOD1-202ENST00000389995 PCNTO95613 3336 aa16.72■□□□□ 0.27
SOD1-202ENST00000389995 MAP2P11137 1827 aaKnown RBP16.72■□□□□ 0.27
SOD1-202ENST00000389995 KIF3CO14782 793 aa16.7■□□□□ 0.26
SOD1-202ENST00000389995 RAPGEF4Q8WZA2 1011 aa16.7■□□□□ 0.26
SOD1-202ENST00000389995 KIF20BQ96Q89 1820 aa16.69■□□□□ 0.26
SOD1-202ENST00000389995 FLAD1Q8NFF5 587 aa16.69■□□□□ 0.26
SOD1-202ENST00000389995 AK7Q96M32 723 aa16.69■□□□□ 0.26
SOD1-202ENST00000389995 KIAA1551Q9HCM1 1747 aa16.69■□□□□ 0.26
SOD1-202ENST00000389995 TATP17735 454 aaPredicted RBP16.68■□□□□ 0.26
SOD1-202ENST00000389995 PIAS4Q8N2W9 510 aaPredicted RBP16.68■□□□□ 0.26
SOD1-202ENST00000389995 GGNBP2Q9H3C7 697 aa16.68■□□□□ 0.26
SOD1-202ENST00000389995 KIF13BQ9NQT8 1826 aa16.68■□□□□ 0.26
SOD1-202ENST00000389995 PKD1L3Q7Z443 1732 aa16.67■□□□□ 0.26
SOD1-202ENST00000389995 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.67■□□□□ 0.26
SOD1-202ENST00000389995 CYP27B1O15528 508 aa16.67■□□□□ 0.26
SOD1-202ENST00000389995 HSP90AB2PQ58FF8 381 aa16.67■□□□□ 0.26
SOD1-202ENST00000389995 RTL1A6NKG5 1358 aa16.66■□□□□ 0.26
SOD1-202ENST00000389995 CGNL1Q0VF96 1302 aa16.66■□□□□ 0.26
SOD1-202ENST00000389995 PCDH11XQ9BZA7 1347 aa16.66■□□□□ 0.26
SOD1-202ENST00000389995 PCDH11YQ9BZA8 1340 aa16.66■□□□□ 0.26
SOD1-202ENST00000389995 ADRA2BP18089 450 aa16.65■□□□□ 0.26
SOD1-202ENST00000389995 LINC00116Q8NCU8 138 aa16.65■□□□□ 0.26
SOD1-202ENST00000389995 PIGBQ92521 554 aa16.65■□□□□ 0.26
SOD1-202ENST00000389995 SMG6Q86US8 1419 aaKnown RBP16.64■□□□□ 0.25
SOD1-202ENST00000389995 CICQ96RK0 1608 aaPredicted RBP16.64■□□□□ 0.25
SOD1-202ENST00000389995 TESK2Q96S53 571 aa16.64■□□□□ 0.25
SOD1-202ENST00000389995 WDR90Q96KV7 1748 aa16.64■□□□□ 0.25
SOD1-202ENST00000389995 BRCA1P38398 1863 aaKnown RBP16.63■□□□□ 0.25
SOD1-202ENST00000389995 ST20-MTHFSA0A0A6YYL1 179 aa16.63■□□□□ 0.25
SOD1-202ENST00000389995 FYB1O15117 783 aa16.63■□□□□ 0.25
SOD1-202ENST00000389995 PUS7Q96PZ0 661 aaKnown RBP16.63■□□□□ 0.25
SOD1-202ENST00000389995 APLP1P51693 650 aa16.61■□□□□ 0.25
SOD1-202ENST00000389995 DNAJC5GQ8N7S2 189 aa16.61■□□□□ 0.25
SOD1-202ENST00000389995 SMARCC1Q92922 1105 aaPredicted RBP16.61■□□□□ 0.25
SOD1-202ENST00000389995 INSRP06213 1382 aa16.61■□□□□ 0.25
SOD1-202ENST00000389995 PXDNLA1KZ92 1463 aa16.61■□□□□ 0.25
SOD1-202ENST00000389995 LOC102724428A0A0B4J2F2 783 aa16.6■□□□□ 0.25
SOD1-202ENST00000389995 GNPATO15228 680 aa16.6■□□□□ 0.25
SOD1-202ENST00000389995 SIK1P57059 783 aa16.6■□□□□ 0.25
SOD1-202ENST00000389995 HTRA3P83110 453 aa16.6■□□□□ 0.25
SOD1-202ENST00000389995 ITPK1Q13572 414 aa16.6■□□□□ 0.25
SOD1-202ENST00000389995 NMRK2Q9NPI5 230 aa16.6■□□□□ 0.25
SOD1-202ENST00000389995 A0A0G2JLW4 131 aa16.59■□□□□ 0.25
SOD1-202ENST00000389995 MMP10P09238 476 aa16.59■□□□□ 0.25
SOD1-202ENST00000389995 SSFA2P28290 1259 aa16.59■□□□□ 0.25
SOD1-202ENST00000389995 ASAP1Q9ULH1 1129 aa16.59■□□□□ 0.25
SOD1-202ENST00000389995 BCS1LQ9Y276 419 aa16.59■□□□□ 0.25
SOD1-202ENST00000389995 FLT4P35916 1363 aa16.58■□□□□ 0.24
SOD1-202ENST00000389995 ARFGEF1Q9Y6D6 1849 aa16.58■□□□□ 0.24
SOD1-202ENST00000389995 MYH14Q7Z406 1995 aaKnown RBP16.57■□□□□ 0.24
SOD1-202ENST00000389995 NSD3Q9BZ95 1437 aa16.57■□□□□ 0.24
SOD1-202ENST00000389995 TOMM70O94826 608 aa16.57■□□□□ 0.24
SOD1-202ENST00000389995 ARHGAP27Q6ZUM4 889 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms