RNA–Protein interactions for RNA: ENST00000389993.7

PSME4-201, Transcript of proteasome activator subunit 4, humanhuman

TSL 1 (best)

Gene PSME4, Length 6,581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-201ENST00000389993 TMOD3Q9NYL9 352 aa17.5■□□□□ 0.39
PSME4-201ENST00000389993 BRPF3Q9ULD4 1205 aa17.5■□□□□ 0.39
PSME4-201ENST00000389993 NUP133Q8WUM0 1156 aa17.5■□□□□ 0.39
PSME4-201ENST00000389993 NKTRP30414 1462 aaKnown RBP17.5■□□□□ 0.39
PSME4-201ENST00000389993 ACSBG1Q96GR2 724 aa17.5■□□□□ 0.39
PSME4-201ENST00000389993 CCDC34Q96HJ3 373 aa17.5■□□□□ 0.39
PSME4-201ENST00000389993 SKOR2Q2VWA4 1001 aaPredicted RBP17.49■□□□□ 0.39
PSME4-201ENST00000389993 IDH1O75874 414 aaKnown RBP17.49■□□□□ 0.39
PSME4-201ENST00000389993 UPF3BQ9BZI7 483 aaKnown RBP17.49■□□□□ 0.39
PSME4-201ENST00000389993 TCEAL9Q9UHQ7 104 aa17.49■□□□□ 0.39
PSME4-201ENST00000389993 JAKMIP1Q96N16 626 aaKnown RBP17.49■□□□□ 0.39
PSME4-201ENST00000389993 RBM5P52756 815 aaKnown RBP eCLIP17.49■□□□□ 0.392e-10■■■■■ 51.2
PSME4-201ENST00000389993 IFT57Q9NWB7 429 aa17.49■□□□□ 0.39
PSME4-201ENST00000389993 DDX17Q92841 729 aaKnown RBP17.48■□□□□ 0.39
PSME4-201ENST00000389993 KCNH5Q8NCM2 988 aa17.48■□□□□ 0.39
PSME4-201ENST00000389993 DDX11Q96FC9 970 aa17.48■□□□□ 0.39
PSME4-201ENST00000389993 CARD14Q9BXL6 1004 aa17.48■□□□□ 0.39
PSME4-201ENST00000389993 A2MP01023 1474 aa17.48■□□□□ 0.39
PSME4-201ENST00000389993 ANKRD24Q8TF21 1146 aa17.48■□□□□ 0.39
PSME4-201ENST00000389993 ABCF2Q9UG63 623 aa17.48■□□□□ 0.39
PSME4-201ENST00000389993 NUCB2P80303 420 aa17.48■□□□□ 0.39
PSME4-201ENST00000389993 WWC3Q9ULE0 1092 aa17.48■□□□□ 0.39
PSME4-201ENST00000389993 TNRQ92752 1358 aa17.48■□□□□ 0.39
PSME4-201ENST00000389993 WDR7Q9Y4E6 1490 aa17.47■□□□□ 0.39
PSME4-201ENST00000389993 MAP3K2Q9Y2U5 619 aa17.47■□□□□ 0.39
PSME4-201ENST00000389993 SASS6Q6UVJ0 657 aa17.47■□□□□ 0.39
PSME4-201ENST00000389993 PPIP5K1Q6PFW1 1433 aa17.47■□□□□ 0.39
PSME4-201ENST00000389993 CFAP43Q8NDM7 1665 aa17.46■□□□□ 0.39
PSME4-201ENST00000389993 PSMA5P28066 241 aa17.46■□□□□ 0.39
PSME4-201ENST00000389993 ERC1Q8IUD2 1116 aa17.45■□□□□ 0.38
PSME4-201ENST00000389993 PRAG1Q86YV5 1406 aa17.45■□□□□ 0.38
PSME4-201ENST00000389993 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.45■□□□□ 0.38
PSME4-201ENST00000389993 DUOX2Q9NRD8 1548 aa17.45■□□□□ 0.38
PSME4-201ENST00000389993 TTLL5Q6EMB2 1281 aa17.45■□□□□ 0.38
PSME4-201ENST00000389993 CASTP20810 708 aaKnown RBP17.44■□□□□ 0.38
PSME4-201ENST00000389993 SPC24Q8NBT2 197 aa17.44■□□□□ 0.38
PSME4-201ENST00000389993 C8orf58Q8NAV2 365 aa17.44■□□□□ 0.38
PSME4-201ENST00000389993 RAI14Q9P0K7 980 aa17.44■□□□□ 0.38
PSME4-201ENST00000389993 METTL24Q5JXM2 366 aa17.44■□□□□ 0.38
PSME4-201ENST00000389993 PPP6R1Q9UPN7 881 aa17.44■□□□□ 0.38
PSME4-201ENST00000389993 NGLY1Q96IV0 654 aa17.44■□□□□ 0.38
PSME4-201ENST00000389993 CYP46A1Q9Y6A2 500 aa17.44■□□□□ 0.38
PSME4-201ENST00000389993 RAB11FIP4Q86YS3 637 aa17.43■□□□□ 0.38
PSME4-201ENST00000389993 SAFBQ15424 915 aaKnown RBP eCLIP17.43■□□□□ 0.38
PSME4-201ENST00000389993 SNRKQ9NRH2 765 aa17.43■□□□□ 0.38
PSME4-201ENST00000389993 CCDC73Q6ZRK6 1079 aa17.43■□□□□ 0.38
PSME4-201ENST00000389993 CCDC82Q8N4S0 544 aa17.43■□□□□ 0.38
PSME4-201ENST00000389993 TSPYL6Q8N831 410 aa17.43■□□□□ 0.38
PSME4-201ENST00000389993 SDF4Q9BRK5 362 aa17.43■□□□□ 0.38
PSME4-201ENST00000389993 FLIIQ13045 1269 aa17.43■□□□□ 0.38
PSME4-201ENST00000389993 PRPF40BQ6NWY9 871 aaKnown RBP17.43■□□□□ 0.38
PSME4-201ENST00000389993 PI4KAP2A4QPH2 592 aa17.42■□□□□ 0.38
PSME4-201ENST00000389993 K7ELQ4 463 aaPredicted RBP17.42■□□□□ 0.38
PSME4-201ENST00000389993 PI4KAP1Q8N8J0 262 aa17.42■□□□□ 0.38
PSME4-201ENST00000389993 FERMT3Q86UX7 667 aa17.42■□□□□ 0.38
PSME4-201ENST00000389993 C16orf71Q8IYS4 520 aaPredicted RBP17.42■□□□□ 0.38
PSME4-201ENST00000389993 PDILTQ8N807 584 aa17.42■□□□□ 0.38
PSME4-201ENST00000389993 CHPF2Q9P2E5 772 aa17.42■□□□□ 0.38
PSME4-201ENST00000389993 CEP126Q9P2H0 1117 aa17.42■□□□□ 0.38
PSME4-201ENST00000389993 RIMS2Q9UQ26 1411 aa17.42■□□□□ 0.38
PSME4-201ENST00000389993 DISP1Q96F81 1524 aa17.42■□□□□ 0.38
PSME4-201ENST00000389993 PHACTR3Q96KR7 559 aa17.42■□□□□ 0.38
PSME4-201ENST00000389993 MX1P20591 662 aa17.41■□□□□ 0.38
PSME4-201ENST00000389993 LRP2BPQ9P2M1 347 aa17.41■□□□□ 0.38
PSME4-201ENST00000389993 GUCY1B3Q02153 619 aa17.41■□□□□ 0.38
PSME4-201ENST00000389993 RABEP1Q15276 862 aa17.41■□□□□ 0.38
PSME4-201ENST00000389993 BRPF1P55201 1214 aaPredicted RBP17.41■□□□□ 0.38
PSME4-201ENST00000389993 PDRG1Q9NUG6 133 aa17.41■□□□□ 0.38
PSME4-201ENST00000389993 EIF4A2Q14240 407 aaKnown RBP17.4■□□□□ 0.38
PSME4-201ENST00000389993 TTC21BQ7Z4L5 1316 aa17.4■□□□□ 0.38
PSME4-201ENST00000389993 A0A087WZG4 1122 aa17.4■□□□□ 0.38
PSME4-201ENST00000389993 TPM3P06753 285 aa17.4■□□□□ 0.38
PSME4-201ENST00000389993 AAMPQ13685 434 aa17.4■□□□□ 0.38
PSME4-201ENST00000389993 IL27Q8NEV9 243 aa17.4■□□□□ 0.38
PSME4-201ENST00000389993 STARD3NLO95772 234 aa17.4■□□□□ 0.38
PSME4-201ENST00000389993 TDO2P48775 406 aa17.4■□□□□ 0.38
PSME4-201ENST00000389993 NASPP49321 788 aaPredicted RBP17.4■□□□□ 0.38
PSME4-201ENST00000389993 DNAAF4Q8WXU2 420 aa17.4■□□□□ 0.38
PSME4-201ENST00000389993 TESK2Q96S53 571 aa17.4■□□□□ 0.38
PSME4-201ENST00000389993 CCDC83Q8IWF9 413 aa17.39■□□□□ 0.38
PSME4-201ENST00000389993 MEIS3Q99687 375 aa17.39■□□□□ 0.38
PSME4-201ENST00000389993 TRMT112Q9UI30 125 aaKnown RBP17.39■□□□□ 0.37
PSME4-201ENST00000389993 POLKQ9UBT6 870 aa17.38■□□□□ 0.37
PSME4-201ENST00000389993 CT47B1P0C2W7 299 aaPredicted RBP17.38■□□□□ 0.37
PSME4-201ENST00000389993 PCDHB15Q9Y5E8 787 aa17.38■□□□□ 0.37
PSME4-201ENST00000389993 MINDY4BA8MYZ0 360 aa17.38■□□□□ 0.37
PSME4-201ENST00000389993 RALGAPBQ86X10 1494 aa17.38■□□□□ 0.37
PSME4-201ENST00000389993 UBE3BQ7Z3V4 1068 aa17.38■□□□□ 0.37
PSME4-201ENST00000389993 HOMER1Q86YM7 354 aa17.38■□□□□ 0.37
PSME4-201ENST00000389993 ZSCAN29Q8IWY8 852 aaPredicted RBP17.37■□□□□ 0.37
PSME4-201ENST00000389993 MTHFSDQ2M296 383 aaKnown RBP17.37■□□□□ 0.37
PSME4-201ENST00000389993 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.37■□□□□ 0.371e-7■■□□□ 14.5
PSME4-201ENST00000389993 LARP1BQ659C4 914 aaKnown RBP17.37■□□□□ 0.37
PSME4-201ENST00000389993 LRPPRCP42704 1394 aaKnown RBP17.37■□□□□ 0.37
PSME4-201ENST00000389993 TSR1Q2NL82 804 aaKnown RBP17.37■□□□□ 0.37
PSME4-201ENST00000389993 ZNF518AQ6AHZ1 1483 aa17.37■□□□□ 0.37
PSME4-201ENST00000389993 CWC22Q9HCG8 908 aaKnown RBP17.37■□□□□ 0.37
PSME4-201ENST00000389993 KCNA6P17658 529 aa17.37■□□□□ 0.37
PSME4-201ENST00000389993 RPAP2Q8IXW5 612 aaPredicted RBP17.37■□□□□ 0.37
PSME4-201ENST00000389993 CAMK4Q16566 473 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms