RNA–Protein interactions for RNA: ENST00000384566.1

RNU6-140P-201, Transcript of RNA, U6 small nuclear 140, pseudogene, humanhuman

BASIC

Gene RNU6-140P, Length 108 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-140P-201ENST00000384566 CDV3Q9UKY7 258 aaKnown RBP4.9□□□□□ -1.63
RNU6-140P-201ENST00000384566 ESPNB1AK53 854 aa4.89□□□□□ -1.63
RNU6-140P-201ENST00000384566 H3BRB1 525 aa4.89□□□□□ -1.63
RNU6-140P-201ENST00000384566 M0R2N6 131 aa4.89□□□□□ -1.63
RNU6-140P-201ENST00000384566 ZNF511Q8NB15 262 aa4.89□□□□□ -1.63
RNU6-140P-201ENST00000384566 SLC6A16Q9GZN6 736 aa4.89□□□□□ -1.63
RNU6-140P-201ENST00000384566 TUT1Q9H6E5 874 aaKnown RBP4.89□□□□□ -1.63
RNU6-140P-201ENST00000384566 PCDH10Q9P2E7 1040 aa4.89□□□□□ -1.63
RNU6-140P-201ENST00000384566 C21orf2O43822 256 aa4.88□□□□□ -1.63
RNU6-140P-201ENST00000384566 TLL1O43897 1013 aa4.88□□□□□ -1.63
RNU6-140P-201ENST00000384566 PTCD1O75127 700 aaKnown RBP4.88□□□□□ -1.63
RNU6-140P-201ENST00000384566 WEE1P30291 646 aa4.88□□□□□ -1.63
RNU6-140P-201ENST00000384566 FKBP4Q02790 459 aaKnown RBP eCLIP4.88□□□□□ -1.63
RNU6-140P-201ENST00000384566 ZNF211Q13398 564 aaPredicted RBP4.88□□□□□ -1.63
RNU6-140P-201ENST00000384566 SF3B2Q13435 895 aaKnown RBP4.88□□□□□ -1.63
RNU6-140P-201ENST00000384566 C4orf48Q5BLP8 95 aa4.88□□□□□ -1.63
RNU6-140P-201ENST00000384566 FOXJ1Q92949 421 aa4.88□□□□□ -1.63
RNU6-140P-201ENST00000384566 ANO2Q9NQ90 1003 aa4.88□□□□□ -1.63
RNU6-140P-201ENST00000384566 PCDHB11Q9Y5F2 797 aa4.88□□□□□ -1.63
RNU6-140P-201ENST00000384566 MYCP01106 439 aaPredicted RBP4.87□□□□□ -1.63
RNU6-140P-201ENST00000384566 VAMP1P23763 118 aa4.87□□□□□ -1.63
RNU6-140P-201ENST00000384566 LINC01559Q495D7 138 aa4.87□□□□□ -1.63
RNU6-140P-201ENST00000384566 THSD4Q6ZMP0 1018 aa4.87□□□□□ -1.63
RNU6-140P-201ENST00000384566 ZSCAN29Q8IWY8 852 aaPredicted RBP4.87□□□□□ -1.63
RNU6-140P-201ENST00000384566 TRMT44Q8IYL2 757 aaKnown RBP4.87□□□□□ -1.63
RNU6-140P-201ENST00000384566 GTF3C2Q8WUA4 911 aaPredicted RBP4.87□□□□□ -1.63
RNU6-140P-201ENST00000384566 ASB16Q96NS5 453 aa4.87□□□□□ -1.63
RNU6-140P-201ENST00000384566 MTRQ99707 1265 aa4.87□□□□□ -1.63
RNU6-140P-201ENST00000384566 C1QTNF2Q9BXJ5 285 aa4.87□□□□□ -1.63
RNU6-140P-201ENST00000384566 USP35Q9P2H5 1018 aa4.87□□□□□ -1.63
RNU6-140P-201ENST00000384566 DCTN4Q9UJW0 460 aa4.87□□□□□ -1.63
RNU6-140P-201ENST00000384566 MAPK1P28482 360 aa4.86□□□□□ -1.63
RNU6-140P-201ENST00000384566 FKBP5Q13451 457 aaPredicted RBP4.86□□□□□ -1.63
RNU6-140P-201ENST00000384566 COL19A1Q14993 1142 aa4.86□□□□□ -1.63
RNU6-140P-201ENST00000384566 ECM1Q16610 540 aa4.86□□□□□ -1.63
RNU6-140P-201ENST00000384566 COL26A1Q96A83 441 aa4.86□□□□□ -1.63
RNU6-140P-201ENST00000384566 FAM163AQ96GL9 167 aaPredicted RBP4.86□□□□□ -1.63
RNU6-140P-201ENST00000384566 BCL11AQ9H165 835 aa4.86□□□□□ -1.63
RNU6-140P-201ENST00000384566 IL21Q9HBE4 155 aa4.86□□□□□ -1.63
RNU6-140P-201ENST00000384566 SEPT3Q9UH03 358 aa4.86□□□□□ -1.63
RNU6-140P-201ENST00000384566 DNMT3AQ9Y6K1 912 aaPredicted RBP4.86□□□□□ -1.63
RNU6-140P-201ENST00000384566 LGR5O75473 907 aa4.85□□□□□ -1.63
RNU6-140P-201ENST00000384566 TCF3P15923 654 aa4.85□□□□□ -1.63
RNU6-140P-201ENST00000384566 IGFBP4P22692 258 aa4.85□□□□□ -1.63
RNU6-140P-201ENST00000384566 ARHGAP4P98171 946 aa4.85□□□□□ -1.63
RNU6-140P-201ENST00000384566 LHX8Q68G74 356 aa4.85□□□□□ -1.63
RNU6-140P-201ENST00000384566 FBXO33Q7Z6M2 555 aa4.85□□□□□ -1.63
RNU6-140P-201ENST00000384566 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.85□□□□□ -1.63
RNU6-140P-201ENST00000384566 TSEN2Q8NCE0 465 aaKnown RBP4.85□□□□□ -1.63
RNU6-140P-201ENST00000384566 TRIM52Q96A61 297 aa4.85□□□□□ -1.63
RNU6-140P-201ENST00000384566 KCTD15Q96SI1 283 aaPredicted RBP4.85□□□□□ -1.63
RNU6-140P-201ENST00000384566 MKNK1Q9BUB5 465 aa4.85□□□□□ -1.63
RNU6-140P-201ENST00000384566 FCF1Q9Y324 198 aaKnown RBP4.85□□□□□ -1.63
RNU6-140P-201ENST00000384566 FOXO3O43524 673 aa4.84□□□□□ -1.63
RNU6-140P-201ENST00000384566 SH3BP2P78314 561 aa4.84□□□□□ -1.63
RNU6-140P-201ENST00000384566 TJAP1Q5JTD0 557 aa4.84□□□□□ -1.63
RNU6-140P-201ENST00000384566 HELQQ8TDG4 1101 aa4.84□□□□□ -1.63
RNU6-140P-201ENST00000384566 ESF1Q9H501 851 aaKnown RBP4.84□□□□□ -1.63
RNU6-140P-201ENST00000384566 ZNF358Q9NW07 568 aa4.84□□□□□ -1.63
RNU6-140P-201ENST00000384566 BACH1O14867 736 aa4.83□□□□□ -1.64
RNU6-140P-201ENST00000384566 FAM13AO94988 1023 aa4.83□□□□□ -1.64
RNU6-140P-201ENST00000384566 S1PR4O95977 384 aa4.83□□□□□ -1.64
RNU6-140P-201ENST00000384566 NPR3P17342 541 aa4.83□□□□□ -1.64
RNU6-140P-201ENST00000384566 EAPPQ56P03 285 aaPredicted RBP4.83□□□□□ -1.64
RNU6-140P-201ENST00000384566 CAPN12Q6ZSI9 719 aa4.83□□□□□ -1.64
RNU6-140P-201ENST00000384566 RGL4Q8IZJ4 473 aa4.83□□□□□ -1.64
RNU6-140P-201ENST00000384566 GAS2L2Q8NHY3 880 aa4.83□□□□□ -1.64
RNU6-140P-201ENST00000384566 ZNF516Q92618 1163 aa4.83□□□□□ -1.64
RNU6-140P-201ENST00000384566 KCTD12Q96CX2 325 aaKnown RBP4.83□□□□□ -1.64
RNU6-140P-201ENST00000384566 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.83□□□□□ -1.64
RNU6-140P-201ENST00000384566 ATAD2Q6PL18 1390 aa4.82□□□□□ -1.64
RNU6-140P-201ENST00000384566 TMEM229AB2RXF0 380 aa4.82□□□□□ -1.64
RNU6-140P-201ENST00000384566 WASLO00401 505 aaPredicted RBP4.82□□□□□ -1.64
RNU6-140P-201ENST00000384566 ZBTB24O43167 697 aaPredicted RBP4.82□□□□□ -1.64
RNU6-140P-201ENST00000384566 VARSP26640 1264 aaKnown RBP4.82□□□□□ -1.64
RNU6-140P-201ENST00000384566 RAB15P59190 212 aa4.82□□□□□ -1.64
RNU6-140P-201ENST00000384566 ERVK-9P63128 1117 aa4.82□□□□□ -1.64
RNU6-140P-201ENST00000384566 MTMR3Q13615 1198 aa4.82□□□□□ -1.64
RNU6-140P-201ENST00000384566 NAA30Q147X3 362 aaPredicted RBP4.82□□□□□ -1.64
RNU6-140P-201ENST00000384566 INTS6LQ5JSJ4 861 aaKnown RBP4.82□□□□□ -1.64
RNU6-140P-201ENST00000384566 CC2D2BQ6DHV5 1058 aa4.82□□□□□ -1.64
RNU6-140P-201ENST00000384566 PURBQ96QR8 312 aaKnown RBP4.82□□□□□ -1.64
RNU6-140P-201ENST00000384566 MAP4K5Q9Y4K4 846 aa4.82□□□□□ -1.64
RNU6-140P-201ENST00000384566 ERVH48-1M5A8F1 160 aa4.81□□□□□ -1.64
RNU6-140P-201ENST00000384566 SCTRP47872 440 aa4.81□□□□□ -1.64
RNU6-140P-201ENST00000384566 TAGLNQ01995 201 aaKnown RBP4.81□□□□□ -1.64
RNU6-140P-201ENST00000384566 VASH1Q7L8A9 365 aaPredicted RBP4.81□□□□□ -1.64
RNU6-140P-201ENST00000384566 SCG3Q8WXD2 468 aaKnown RBP4.81□□□□□ -1.64
RNU6-140P-201ENST00000384566 VTI1AQ96AJ9 217 aa4.81□□□□□ -1.64
RNU6-140P-201ENST00000384566 C8orf37Q96NL8 207 aa4.81□□□□□ -1.64
RNU6-140P-201ENST00000384566 RBCK1Q9BYM8 510 aa4.81□□□□□ -1.64
RNU6-140P-201ENST00000384566 NDUFB5O43674 189 aa4.8□□□□□ -1.64
RNU6-140P-201ENST00000384566 INHAP05111 366 aa4.8□□□□□ -1.64
RNU6-140P-201ENST00000384566 SCNN1DP51172 638 aa4.8□□□□□ -1.64
RNU6-140P-201ENST00000384566 GDF10P55107 478 aa4.8□□□□□ -1.64
RNU6-140P-201ENST00000384566 FGD1P98174 961 aa4.8□□□□□ -1.64
RNU6-140P-201ENST00000384566 TNS4Q8IZW8 715 aa4.8□□□□□ -1.64
RNU6-140P-201ENST00000384566 NKX2-3Q8TAU0 364 aa4.8□□□□□ -1.64
RNU6-140P-201ENST00000384566 CITED4Q96RK1 184 aa4.8□□□□□ -1.64
RNU6-140P-201ENST00000384566 OSBPL3Q9H4L5 887 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 125.7 ms