RNA–Protein interactions for RNA: ENST00000382020.8

TUSC3-201, Transcript of tumor suppressor candidate 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TUSC3, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUSC3-201ENST00000382020 SNX21Q969T3 373 aa17.91■□□□□ 0.46
TUSC3-201ENST00000382020 ADGRL1O94910 1474 aa17.9■□□□□ 0.46
TUSC3-201ENST00000382020 PLCD3Q8N3E9 789 aa17.9■□□□□ 0.46
TUSC3-201ENST00000382020 IFT57Q9NWB7 429 aa17.9■□□□□ 0.46
TUSC3-201ENST00000382020 CCDC83Q8IWF9 413 aa17.9■□□□□ 0.46
TUSC3-201ENST00000382020 C9orf78Q9NZ63 289 aaPredicted RBP17.9■□□□□ 0.46
TUSC3-201ENST00000382020 LRRFIP2Q9Y608 721 aaKnown RBP17.9■□□□□ 0.46
TUSC3-201ENST00000382020 ERVK-7P63135 1459 aa17.9■□□□□ 0.46
TUSC3-201ENST00000382020 PHF14O94880 888 aa17.9■□□□□ 0.46
TUSC3-201ENST00000382020 SIRT2Q8IXJ6 389 aa17.9■□□□□ 0.46
TUSC3-201ENST00000382020 PDCL2Q8N4E4 241 aa17.9■□□□□ 0.46
TUSC3-201ENST00000382020 BICD2Q8TD16 824 aa17.9■□□□□ 0.46
TUSC3-201ENST00000382020 NSFL1CQ9UNZ2 370 aaKnown RBP17.9■□□□□ 0.46
TUSC3-201ENST00000382020 KIF3AQ9Y496 699 aa17.89■□□□□ 0.45
TUSC3-201ENST00000382020 NUDT16Q96DE0 195 aaKnown RBP17.89■□□□□ 0.45
TUSC3-201ENST00000382020 NLRP6P59044 892 aa17.88■□□□□ 0.45
TUSC3-201ENST00000382020 GIMAP6Q6P9H5 292 aa17.88■□□□□ 0.45
TUSC3-201ENST00000382020 TMEM63CQ9P1W3 806 aa17.88■□□□□ 0.45
TUSC3-201ENST00000382020 NOL7Q9UMY1 257 aaKnown RBP17.88■□□□□ 0.45
TUSC3-201ENST00000382020 USP26Q9BXU7 913 aa17.88■□□□□ 0.45
TUSC3-201ENST00000382020 DUOX2Q9NRD8 1548 aa17.88■□□□□ 0.45
TUSC3-201ENST00000382020 SAMD9LQ8IVG5 1584 aa17.88■□□□□ 0.45
TUSC3-201ENST00000382020 SRGAP3O43295 1099 aa17.87■□□□□ 0.45
TUSC3-201ENST00000382020 PLCH2O75038 1416 aa17.87■□□□□ 0.45
TUSC3-201ENST00000382020 ERICH4A6NGS2 130 aa17.87■□□□□ 0.45
TUSC3-201ENST00000382020 FANCAO15360 1455 aa17.87■□□□□ 0.45
TUSC3-201ENST00000382020 MBD3O95983 291 aa17.87■□□□□ 0.45
TUSC3-201ENST00000382020 ANKRD36BQ8N2N9 1353 aa17.87■□□□□ 0.45
TUSC3-201ENST00000382020 ZBTB9Q96C00 473 aa17.87■□□□□ 0.45
TUSC3-201ENST00000382020 ABCC11Q96J66 1382 aa17.87■□□□□ 0.45
TUSC3-201ENST00000382020 MX1P20591 662 aa17.87■□□□□ 0.45
TUSC3-201ENST00000382020 CKAP2LQ8IYA6 745 aa17.87■□□□□ 0.45
TUSC3-201ENST00000382020 SMAP1Q8IYB5 467 aaPredicted RBP17.87■□□□□ 0.45
TUSC3-201ENST00000382020 CNPY2Q9Y2B0 182 aa17.86■□□□□ 0.45
TUSC3-201ENST00000382020 GADD45BO75293 160 aaPredicted RBP17.86■□□□□ 0.45
TUSC3-201ENST00000382020 RTEL1-TNFRSF6BF6WH68 1400 aa17.86■□□□□ 0.45
TUSC3-201ENST00000382020 HDGFL1Q5TGJ6 251 aa17.86■□□□□ 0.45
TUSC3-201ENST00000382020 CCDC94Q9BW85 323 aaPredicted RBP17.86■□□□□ 0.45
TUSC3-201ENST00000382020 TFIP11Q9UBB9 837 aaKnown RBP17.86■□□□□ 0.45
TUSC3-201ENST00000382020 RPAP2Q8IXW5 612 aaPredicted RBP17.85■□□□□ 0.45
TUSC3-201ENST00000382020 PPP1R9BQ96SB3 815 aa17.85■□□□□ 0.45
TUSC3-201ENST00000382020 CWC22Q9HCG8 908 aaKnown RBP17.85■□□□□ 0.45
TUSC3-201ENST00000382020 IFIT2P09913 472 aaKnown RBP17.85■□□□□ 0.45
TUSC3-201ENST00000382020 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.85■□□□□ 0.451e-6■■■□□ 19.1
TUSC3-201ENST00000382020 CASTP20810 708 aaKnown RBP17.85■□□□□ 0.45
TUSC3-201ENST00000382020 CEP85Q6P2H3 762 aa17.85■□□□□ 0.45
TUSC3-201ENST00000382020 FAM173BQ6P4H8 233 aa17.85■□□□□ 0.45
TUSC3-201ENST00000382020 NECAB1Q8N987 351 aa17.85■□□□□ 0.45
TUSC3-201ENST00000382020 FMNL2Q96PY5 1086 aa17.85■□□□□ 0.45
TUSC3-201ENST00000382020 PDE1AP54750 535 aa17.84■□□□□ 0.45
TUSC3-201ENST00000382020 JAKMIP1Q96N16 626 aaKnown RBP17.84■□□□□ 0.45
TUSC3-201ENST00000382020 LMBRD1Q9NUN5 540 aa17.84■□□□□ 0.45
TUSC3-201ENST00000382020 PRDM15P57071 1507 aaPredicted RBP17.84■□□□□ 0.45
TUSC3-201ENST00000382020 TRPM1Q7Z4N2 1603 aa17.84■□□□□ 0.45
TUSC3-201ENST00000382020 STK11IPQ8N1F8 1099 aa17.84■□□□□ 0.45
TUSC3-201ENST00000382020 ATP10AO60312 1499 aa17.84■□□□□ 0.45
TUSC3-201ENST00000382020 TRIM5Q9C035 493 aa17.84■□□□□ 0.45
TUSC3-201ENST00000382020 PALD1Q9ULE6 856 aa17.84■□□□□ 0.45
TUSC3-201ENST00000382020 HMGN5P82970 282 aaKnown RBP17.83■□□□□ 0.45
TUSC3-201ENST00000382020 TEFQ10587 303 aa17.83■□□□□ 0.45
TUSC3-201ENST00000382020 PLEKHF1Q96S99 279 aa17.83■□□□□ 0.45
TUSC3-201ENST00000382020 H3BQV1 296 aa17.83■□□□□ 0.44
TUSC3-201ENST00000382020 IFFO2Q5TF58 517 aa17.83■□□□□ 0.44
TUSC3-201ENST00000382020 GPT2Q8TD30 523 aa17.83■□□□□ 0.44
TUSC3-201ENST00000382020 EIF2AK4Q9P2K8 1649 aaKnown RBP17.82■□□□□ 0.44
TUSC3-201ENST00000382020 USP48Q86UV5 1035 aa17.82■□□□□ 0.44
TUSC3-201ENST00000382020 DDX11Q96FC9 970 aa17.82■□□□□ 0.44
TUSC3-201ENST00000382020 DCTPP1Q9H773 170 aa17.82■□□□□ 0.44
TUSC3-201ENST00000382020 ADCY5O95622 1261 aa17.82■□□□□ 0.44
TUSC3-201ENST00000382020 PRPF40BQ6NWY9 871 aaKnown RBP17.82■□□□□ 0.44
TUSC3-201ENST00000382020 PPIP5K1Q6PFW1 1433 aa17.82■□□□□ 0.44
TUSC3-201ENST00000382020 NPC1L1Q9UHC9 1359 aa17.82■□□□□ 0.44
TUSC3-201ENST00000382020 ANKRD44Q8N8A2 993 aa17.82■□□□□ 0.44
TUSC3-201ENST00000382020 CDC42BPAQ5VT25 1732 aa17.81■□□□□ 0.44
TUSC3-201ENST00000382020 U2AF2P26368 475 aaKnown RBP eCLIP17.8■□□□□ 0.442e-6■□□□□ 10.6
TUSC3-201ENST00000382020 LRSAM1Q6UWE0 723 aa17.8■□□□□ 0.44
TUSC3-201ENST00000382020 PRDM4Q9UKN5 801 aa17.8■□□□□ 0.44
TUSC3-201ENST00000382020 CCDC61Q9Y6R9 512 aa17.8■□□□□ 0.44
TUSC3-201ENST00000382020 ZKSCAN1P17029 563 aaPredicted RBP17.8■□□□□ 0.44
TUSC3-201ENST00000382020 NOLC1Q14978 699 aaKnown RBP eCLIP17.8■□□□□ 0.44
TUSC3-201ENST00000382020 TNNT3P45378 269 aaPredicted RBP17.79■□□□□ 0.44
TUSC3-201ENST00000382020 MSH6P52701 1360 aa17.79■□□□□ 0.44
TUSC3-201ENST00000382020 SYNMO15061 1565 aa17.79■□□□□ 0.44
TUSC3-201ENST00000382020 GNAI3P08754 354 aa17.79■□□□□ 0.44
TUSC3-201ENST00000382020 CHMP4AQ9BY43 222 aa17.79■□□□□ 0.44
TUSC3-201ENST00000382020 ABCA8O94911 1581 aa17.79■□□□□ 0.44
TUSC3-201ENST00000382020 BECN2A8MW95 431 aa17.79■□□□□ 0.44
TUSC3-201ENST00000382020 FAM69CQ0P6D2 419 aa17.79■□□□□ 0.44
TUSC3-201ENST00000382020 KIF2CQ99661 725 aa17.79■□□□□ 0.44
TUSC3-201ENST00000382020 FAM184AQ8NB25 1140 aa17.78■□□□□ 0.44
TUSC3-201ENST00000382020 ZNF692Q9BU19 519 aaPredicted RBP17.78■□□□□ 0.44
TUSC3-201ENST00000382020 WDR33Q9C0J8 1336 aaKnown RBP17.78■□□□□ 0.44
TUSC3-201ENST00000382020 MAST1Q9Y2H9 1570 aa17.78■□□□□ 0.44
TUSC3-201ENST00000382020 PNMA6EA0A0J9YXQ4 647 aa17.78■□□□□ 0.44
TUSC3-201ENST00000382020 FLIIQ13045 1269 aa17.78■□□□□ 0.44
TUSC3-201ENST00000382020 C16orf45Q96MC5 204 aaPredicted RBP17.78■□□□□ 0.44
TUSC3-201ENST00000382020 LARP1BQ659C4 914 aaKnown RBP17.77■□□□□ 0.44
TUSC3-201ENST00000382020 FILIP1Q7Z7B0 1213 aa17.77■□□□□ 0.44
TUSC3-201ENST00000382020 ADCY10Q96PN6 1610 aa17.77■□□□□ 0.44
TUSC3-201ENST00000382020 TTC37Q6PGP7 1564 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms