RNA–Protein interactions for RNA: ENST00000381112.7

CCM2-202, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 1,881 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-202ENST00000381112 COL22A1Q8NFW1 1626 aaPredicted RBP25.46■■□□□ 1.67
CCM2-202ENST00000381112 GNAT3A8MTJ3 354 aa25.45■■□□□ 1.67
CCM2-202ENST00000381112 MAP3K5Q99683 1374 aa25.45■■□□□ 1.66
CCM2-202ENST00000381112 CRB1P82279 1406 aa25.44■■□□□ 1.66
CCM2-202ENST00000381112 AMOTQ4VCS5 1084 aa25.44■■□□□ 1.66
CCM2-202ENST00000381112 PLEKHO1Q53GL0 409 aaPredicted RBP25.44■■□□□ 1.66
CCM2-202ENST00000381112 MBIPQ9NS73 344 aa25.44■■□□□ 1.66
CCM2-202ENST00000381112 RARSP54136 660 aaKnown RBP25.43■■□□□ 1.66
CCM2-202ENST00000381112 PHLPP1O60346 1717 aa25.43■■□□□ 1.66
CCM2-202ENST00000381112 PLIN1O60240 522 aa25.43■■□□□ 1.66
CCM2-202ENST00000381112 BCAR3O75815 825 aa25.43■■□□□ 1.66
CCM2-202ENST00000381112 FAM208AQ9UK61 1670 aaKnown RBP25.43■■□□□ 1.66
CCM2-202ENST00000381112 COL5A2P05997 1499 aaPredicted RBP25.42■■□□□ 1.66
CCM2-202ENST00000381112 WDR17Q8IZU2 1322 aa25.42■■□□□ 1.66
CCM2-202ENST00000381112 CHL1O00533 1208 aa25.4■■□□□ 1.66
CCM2-202ENST00000381112 CERKQ8TCT0 537 aa25.4■■□□□ 1.66
CCM2-202ENST00000381112 IL17REQ8NFR9 667 aa25.39■■□□□ 1.66
CCM2-202ENST00000381112 RAPGEF4Q8WZA2 1011 aa25.39■■□□□ 1.66
CCM2-202ENST00000381112 PLEKHG2Q9H7P9 1386 aa25.39■■□□□ 1.65
CCM2-202ENST00000381112 ZNF530Q6P9A1 599 aaPredicted RBP25.38■■□□□ 1.65
CCM2-202ENST00000381112 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.38■■□□□ 1.65
CCM2-202ENST00000381112 AKAP4Q5JQC9 854 aa25.37■■□□□ 1.65
CCM2-202ENST00000381112 LRRC37A3O60309 1634 aa25.36■■□□□ 1.65
CCM2-202ENST00000381112 TATP17735 454 aaPredicted RBP25.36■■□□□ 1.65
CCM2-202ENST00000381112 MEGF6O75095 1541 aa25.36■■□□□ 1.65
CCM2-202ENST00000381112 TOM1L2Q6ZVM7 507 aa25.35■■□□□ 1.65
CCM2-202ENST00000381112 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.35■■□□□ 1.65
CCM2-202ENST00000381112 CEMIPQ8WUJ3 1361 aa25.35■■□□□ 1.65
CCM2-202ENST00000381112 CARD10Q9BWT7 1032 aa25.34■■□□□ 1.65
CCM2-202ENST00000381112 C1orf141Q5JVX7 400 aa25.33■■□□□ 1.65
CCM2-202ENST00000381112 C20orf194Q5TEA3 1177 aa25.33■■□□□ 1.65
CCM2-202ENST00000381112 PPP4R2Q9NY27 417 aa25.33■■□□□ 1.65
CCM2-202ENST00000381112 VAMP4O75379 141 aa25.32■■□□□ 1.64
CCM2-202ENST00000381112 EVA1CP58658 441 aa25.32■■□□□ 1.64
CCM2-202ENST00000381112 LARP1Q6PKG0 1096 aaKnown RBP25.32■■□□□ 1.64
CCM2-202ENST00000381112 TSPYL6Q8N831 410 aa25.32■■□□□ 1.64
CCM2-202ENST00000381112 ZNF428Q96B54 188 aa25.32■■□□□ 1.64
CCM2-202ENST00000381112 STRN4Q9NRL3 753 aa25.32■■□□□ 1.64
CCM2-202ENST00000381112 BTG4Q9NY30 223 aa25.32■■□□□ 1.64
CCM2-202ENST00000381112 BCL2L13Q9BXK5 485 aa25.32■■□□□ 1.64
CCM2-202ENST00000381112 COL14A1Q05707 1796 aaKnown RBP25.31■■□□□ 1.64
CCM2-202ENST00000381112 C8orf58Q8NAV2 365 aa25.31■■□□□ 1.64
CCM2-202ENST00000381112 SSH1Q8WYL5 1049 aa25.31■■□□□ 1.64
CCM2-202ENST00000381112 LGR6Q9HBX8 967 aa25.31■■□□□ 1.64
CCM2-202ENST00000381112 MIS18AQ9NYP9 233 aa25.3■■□□□ 1.64
CCM2-202ENST00000381112 TSPYL4Q9UJ04 414 aa25.3■■□□□ 1.64
CCM2-202ENST00000381112 SPG7Q9UQ90 795 aa25.3■■□□□ 1.64
CCM2-202ENST00000381112 BABAM1Q9NWV8 329 aa25.3■■□□□ 1.64
CCM2-202ENST00000381112 TAF7Q15545 349 aaPredicted RBP25.29■■□□□ 1.64
CCM2-202ENST00000381112 TWISTNBQ3B726 338 aaPredicted RBP25.29■■□□□ 1.64
CCM2-202ENST00000381112 ALDH1L2Q3SY69 923 aa25.29■■□□□ 1.64
CCM2-202ENST00000381112 EXOC6Q8TAG9 804 aa25.29■■□□□ 1.64
CCM2-202ENST00000381112 OVOS2A0A0G2JMS6 1433 aa25.29■■□□□ 1.64
CCM2-202ENST00000381112 MPRIPQ6WCQ1 1025 aa25.28■■□□□ 1.64
CCM2-202ENST00000381112 SMC4Q9NTJ3 1288 aa25.28■■□□□ 1.64
CCM2-202ENST00000381112 RNMTO43148 476 aaKnown RBP25.27■■□□□ 1.64
CCM2-202ENST00000381112 CRBNQ96SW2 442 aa25.27■■□□□ 1.64
CCM2-202ENST00000381112 ELL2O00472 640 aaPredicted RBP25.26■■□□□ 1.63
CCM2-202ENST00000381112 FRAT1Q92837 279 aaPredicted RBP25.26■■□□□ 1.63
CCM2-202ENST00000381112 PHKG2P15735 406 aa25.26■■□□□ 1.63
CCM2-202ENST00000381112 PDE3AQ14432 1141 aa25.26■■□□□ 1.63
CCM2-202ENST00000381112 ADAMTS2O95450 1211 aa25.25■■□□□ 1.63
CCM2-202ENST00000381112 CANXP27824 592 aaKnown RBP25.25■■□□□ 1.63
CCM2-202ENST00000381112 KRT24Q2M2I5 525 aa25.25■■□□□ 1.63
CCM2-202ENST00000381112 PKD1L3Q7Z443 1732 aa25.24■■□□□ 1.63
CCM2-202ENST00000381112 BRPF1P55201 1214 aaPredicted RBP25.23■■□□□ 1.63
CCM2-202ENST00000381112 IFNL2Q8IZJ0 200 aa25.23■■□□□ 1.63
CCM2-202ENST00000381112 JCADQ9P266 1359 aa25.23■■□□□ 1.63
CCM2-202ENST00000381112 NUTM2BA6NNL0 878 aaPredicted RBP25.23■■□□□ 1.63
CCM2-202ENST00000381112 NUTM2EB1AL46 878 aaPredicted RBP25.23■■□□□ 1.63
CCM2-202ENST00000381112 IL2RBP14784 551 aa25.23■■□□□ 1.63
CCM2-202ENST00000381112 NUTM2AQ8IVF1 878 aaPredicted RBP25.23■■□□□ 1.63
CCM2-202ENST00000381112 ADAMTS7Q9UKP4 1686 aa25.22■■□□□ 1.63
CCM2-202ENST00000381112 CYP27B1O15528 508 aa25.22■■□□□ 1.63
CCM2-202ENST00000381112 TEFQ10587 303 aa25.22■■□□□ 1.63
CCM2-202ENST00000381112 ZKSCAN2Q63HK3 967 aa25.2■■□□□ 1.62
CCM2-202ENST00000381112 ZCRB1Q8TBF4 217 aaKnown RBP25.2■■□□□ 1.62
CCM2-202ENST00000381112 KIF16BQ96L93 1317 aa25.2■■□□□ 1.62
CCM2-202ENST00000381112 PARP4Q9UKK3 1724 aaKnown RBP25.2■■□□□ 1.62
CCM2-202ENST00000381112 KDM6AO15550 1401 aaPredicted RBP25.19■■□□□ 1.62
CCM2-202ENST00000381112 MRPL50Q8N5N7 158 aaKnown RBP25.19■■□□□ 1.62
CCM2-202ENST00000381112 NOB1Q9ULX3 412 aaKnown RBP25.19■■□□□ 1.62
CCM2-202ENST00000381112 B4GALNT3Q6L9W6 998 aa25.18■■□□□ 1.62
CCM2-202ENST00000381112 PANK1Q8TE04 598 aa25.18■■□□□ 1.62
CCM2-202ENST00000381112 DCAF5Q96JK2 942 aa25.17■■□□□ 1.62
CCM2-202ENST00000381112 USP35Q9P2H5 1018 aa25.17■■□□□ 1.62
CCM2-202ENST00000381112 TNNQ9UQP3 1299 aa25.17■■□□□ 1.62
CCM2-202ENST00000381112 HSP90AB1P08238 724 aaKnown RBP25.17■■□□□ 1.62
CCM2-202ENST00000381112 PCDH11XQ9BZA7 1347 aa25.17■■□□□ 1.62
CCM2-202ENST00000381112 PCDH11YQ9BZA8 1340 aa25.17■■□□□ 1.62
CCM2-202ENST00000381112 PLCH1Q4KWH8 1693 aa25.16■■□□□ 1.62
CCM2-202ENST00000381112 BTBD11A6QL63 1104 aa25.16■■□□□ 1.62
CCM2-202ENST00000381112 RLBP1P12271 317 aa25.16■■□□□ 1.62
CCM2-202ENST00000381112 IPO8O15397 1037 aaKnown RBP25.15■■□□□ 1.62
CCM2-202ENST00000381112 ATF7IPQ6VMQ6 1270 aa25.15■■□□□ 1.62
CCM2-202ENST00000381112 SOS1Q07889 1333 aaPredicted RBP25.15■■□□□ 1.62
CCM2-202ENST00000381112 TCERG1O14776 1098 aaKnown RBP25.15■■□□□ 1.62
CCM2-202ENST00000381112 TRIM27P14373 513 aa25.15■■□□□ 1.62
CCM2-202ENST00000381112 SLIT2O94813 1529 aa25.14■■□□□ 1.62
CCM2-202ENST00000381112 DISP2A7MBM2 1401 aa25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms