RNA–Protein interactions for RNA: ENST00000380913.7

SHROOM2-201, Transcript of shroom family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM2, Length 7,447 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM2-201ENST00000380913 CARMIL2Q6F5E8 1435 aa17.79■□□□□ 0.44
SHROOM2-201ENST00000380913 UBAC1Q9BSL1 405 aa17.79■□□□□ 0.44
SHROOM2-201ENST00000380913 PDZRN3Q9UPQ7 1066 aa17.79■□□□□ 0.44
SHROOM2-201ENST00000380913 UBXN4Q92575 508 aa17.79■□□□□ 0.44
SHROOM2-201ENST00000380913 ABTB2Q8N961 1025 aa17.79■□□□□ 0.44
SHROOM2-201ENST00000380913 CASQ1P31415 396 aa17.78■□□□□ 0.44
SHROOM2-201ENST00000380913 CPLX3Q8WVH0 158 aa17.78■□□□□ 0.44
SHROOM2-201ENST00000380913 HIP1O00291 1037 aa17.78■□□□□ 0.44
SHROOM2-201ENST00000380913 USP47Q96K76 1375 aa17.78■□□□□ 0.44
SHROOM2-201ENST00000380913 TERF1P54274 439 aa17.78■□□□□ 0.44
SHROOM2-201ENST00000380913 HOOK3Q86VS8 718 aa17.78■□□□□ 0.44
SHROOM2-201ENST00000380913 FAM107BQ9H098 131 aa17.78■□□□□ 0.44
SHROOM2-201ENST00000380913 CACNA2D4Q7Z3S7 1137 aa17.77■□□□□ 0.44
SHROOM2-201ENST00000380913 SPA17Q15506 151 aa17.77■□□□□ 0.44
SHROOM2-201ENST00000380913 PDCL2Q8N4E4 241 aa17.77■□□□□ 0.44
SHROOM2-201ENST00000380913 CCDC82Q8N4S0 544 aa17.77■□□□□ 0.44
SHROOM2-201ENST00000380913 WASHC2AQ641Q2 1341 aa17.77■□□□□ 0.44
SHROOM2-201ENST00000380913 PRPF4BQ13523 1007 aaKnown RBP17.77■□□□□ 0.44
SHROOM2-201ENST00000380913 GRPEL1Q9HAV7 217 aa17.77■□□□□ 0.44
SHROOM2-201ENST00000380913 CETN2P41208 172 aa17.77■□□□□ 0.43
SHROOM2-201ENST00000380913 JAKMIP1Q96N16 626 aaKnown RBP17.77■□□□□ 0.43
SHROOM2-201ENST00000380913 NOB1Q9ULX3 412 aaKnown RBP17.77■□□□□ 0.43
SHROOM2-201ENST00000380913 SPECC1Q5M775 1068 aa17.77■□□□□ 0.43
SHROOM2-201ENST00000380913 NUP62CLQ9H1M0 184 aa17.76■□□□□ 0.43
SHROOM2-201ENST00000380913 GNAI2P04899 355 aa17.76■□□□□ 0.43
SHROOM2-201ENST00000380913 GUCY1B3Q02153 619 aa17.76■□□□□ 0.43
SHROOM2-201ENST00000380913 HOMER2Q9NSB8 354 aa17.76■□□□□ 0.43
SHROOM2-201ENST00000380913 LRP2BPQ9P2M1 347 aa17.76■□□□□ 0.43
SHROOM2-201ENST00000380913 URI1O94763 535 aaPredicted RBP17.76■□□□□ 0.43
SHROOM2-201ENST00000380913 ABCF2Q9UG63 623 aa17.76■□□□□ 0.43
SHROOM2-201ENST00000380913 ESCO1Q5FWF5 840 aa17.75■□□□□ 0.43
SHROOM2-201ENST00000380913 AACSQ86V21 672 aa17.75■□□□□ 0.43
SHROOM2-201ENST00000380913 TRMT1Q9NXH9 659 aaKnown RBP17.75■□□□□ 0.43
SHROOM2-201ENST00000380913 IDH1O75874 414 aaKnown RBP17.75■□□□□ 0.43
SHROOM2-201ENST00000380913 MRPS9P82933 396 aaKnown RBP17.75■□□□□ 0.43
SHROOM2-201ENST00000380913 TTLL12Q14166 644 aaPredicted RBP17.75■□□□□ 0.43
SHROOM2-201ENST00000380913 HLTFQ14527 1009 aaKnown RBP eCLIP17.75■□□□□ 0.43
SHROOM2-201ENST00000380913 CCDC160A6NGH7 325 aa17.74■□□□□ 0.43
SHROOM2-201ENST00000380913 BCAR3O75815 825 aa17.74■□□□□ 0.43
SHROOM2-201ENST00000380913 BMS1Q14692 1282 aaKnown RBP17.74■□□□□ 0.43
SHROOM2-201ENST00000380913 SPATA24Q86W54 205 aa17.74■□□□□ 0.43
SHROOM2-201ENST00000380913 GNAI3P08754 354 aa17.74■□□□□ 0.43
SHROOM2-201ENST00000380913 CABP4P57796 275 aa17.74■□□□□ 0.43
SHROOM2-201ENST00000380913 TSR2Q969E8 191 aaKnown RBP17.74■□□□□ 0.43
SHROOM2-201ENST00000380913 PUF60Q9UHX1 559 aaKnown RBP17.74■□□□□ 0.43
SHROOM2-201ENST00000380913 SLC4A8Q2Y0W8 1093 aa17.74■□□□□ 0.43
SHROOM2-201ENST00000380913 PDRG1Q9NUG6 133 aa17.74■□□□□ 0.43
SHROOM2-201ENST00000380913 SOGA1O94964 1423 aa17.74■□□□□ 0.43
SHROOM2-201ENST00000380913 SLC4A2P04920 1241 aa17.74■□□□□ 0.43
SHROOM2-201ENST00000380913 KIF4BQ2VIQ3 1234 aa17.74■□□□□ 0.43
SHROOM2-201ENST00000380913 ZNF354CQ86Y25 554 aa17.74■□□□□ 0.43
SHROOM2-201ENST00000380913 MMRN2Q9H8L6 949 aa17.74■□□□□ 0.43
SHROOM2-201ENST00000380913 TDRD12Q587J7 1177 aaKnown RBP17.73■□□□□ 0.43
SHROOM2-201ENST00000380913 FERMT3Q86UX7 667 aa17.73■□□□□ 0.43
SHROOM2-201ENST00000380913 SYCE3A1L190 88 aa17.73■□□□□ 0.43
SHROOM2-201ENST00000380913 ZNF219Q9P2Y4 722 aaPredicted RBP17.73■□□□□ 0.43
SHROOM2-201ENST00000380913 MINDY4BA8MYZ0 360 aa17.73■□□□□ 0.43
SHROOM2-201ENST00000380913 TMEM132EQ6IEE7 984 aa17.73■□□□□ 0.43
SHROOM2-201ENST00000380913 FERMT2Q96AC1 680 aa17.73■□□□□ 0.43
SHROOM2-201ENST00000380913 CDCA7LQ96GN5 454 aa17.72■□□□□ 0.43
SHROOM2-201ENST00000380913 PPP1R12BO60237 982 aaPredicted RBP17.72■□□□□ 0.43
SHROOM2-201ENST00000380913 WDR33Q9C0J8 1336 aaKnown RBP17.72■□□□□ 0.43
SHROOM2-201ENST00000380913 EXOSC9Q06265 439 aaKnown RBP17.72■□□□□ 0.43
SHROOM2-201ENST00000380913 BLOC1S2Q6QNY1 142 aa17.72■□□□□ 0.43
SHROOM2-201ENST00000380913 PAIP2Q9BPZ3 127 aaKnown RBP17.72■□□□□ 0.43
SHROOM2-201ENST00000380913 IL1RAPL2Q9NP60 686 aa17.72■□□□□ 0.43
SHROOM2-201ENST00000380913 ECM2O94769 699 aaPredicted RBP17.71■□□□□ 0.43
SHROOM2-201ENST00000380913 ZWINTO95229 277 aa17.71■□□□□ 0.43
SHROOM2-201ENST00000380913 ANKRD1Q15327 319 aa17.71■□□□□ 0.43
SHROOM2-201ENST00000380913 GCOM1H8Y6P7 765 aaPredicted RBP17.71■□□□□ 0.43
SHROOM2-201ENST00000380913 MYZAPP0CAP1 466 aa17.71■□□□□ 0.43
SHROOM2-201ENST00000380913 MCM2P49736 904 aa17.71■□□□□ 0.43
SHROOM2-201ENST00000380913 PPP4R3AQ6IN85 833 aa17.71■□□□□ 0.43
SHROOM2-201ENST00000380913 CGNQ9P2M7 1197 aaKnown RBP17.71■□□□□ 0.43
SHROOM2-201ENST00000380913 GTF2F1P35269 517 aaKnown RBP eCLIP17.71■□□□□ 0.43
SHROOM2-201ENST00000380913 LMAN1P49257 510 aa17.71■□□□□ 0.43
SHROOM2-201ENST00000380913 PABPN1LA6NDY0 278 aaKnown RBP17.7■□□□□ 0.42
SHROOM2-201ENST00000380913 CCDC175P0C221 793 aa17.7■□□□□ 0.42
SHROOM2-201ENST00000380913 TMCO4Q5TGY1 634 aa17.7■□□□□ 0.42
SHROOM2-201ENST00000380913 HDGFL1Q5TGJ6 251 aa17.7■□□□□ 0.42
SHROOM2-201ENST00000380913 TWISTNBQ3B726 338 aaPredicted RBP17.7■□□□□ 0.42
SHROOM2-201ENST00000380913 K7ELQ4 463 aaPredicted RBP17.7■□□□□ 0.42
SHROOM2-201ENST00000380913 FERP16591 822 aa17.7■□□□□ 0.42
SHROOM2-201ENST00000380913 NUP88Q99567 741 aaPredicted RBP17.7■□□□□ 0.42
SHROOM2-201ENST00000380913 PIP4K2BP78356 416 aa17.7■□□□□ 0.42
SHROOM2-201ENST00000380913 SMTNL1A8MU46 457 aa17.69■□□□□ 0.42
SHROOM2-201ENST00000380913 SEC63Q9UGP8 760 aaKnown RBP17.69■□□□□ 0.42
SHROOM2-201ENST00000380913 ISM2Q6H9L7 571 aa17.69■□□□□ 0.42
SHROOM2-201ENST00000380913 TIGD1Q96MW7 591 aa17.69■□□□□ 0.42
SHROOM2-201ENST00000380913 CASTP20810 708 aaKnown RBP17.69■□□□□ 0.42
SHROOM2-201ENST00000380913 MTHFSP49914 203 aa17.69■□□□□ 0.42
SHROOM2-201ENST00000380913 TOM1L2Q6ZVM7 507 aa17.69■□□□□ 0.42
SHROOM2-201ENST00000380913 UACAQ9BZF9 1416 aa17.69■□□□□ 0.42
SHROOM2-201ENST00000380913 KIF5CO60282 957 aa17.69■□□□□ 0.42
SHROOM2-201ENST00000380913 PPP1R14CQ8TAE6 165 aa17.69■□□□□ 0.42
SHROOM2-201ENST00000380913 MAATS1Q7Z4T9 603 aa17.69■□□□□ 0.42
SHROOM2-201ENST00000380913 PRKAR2BP31323 418 aa17.69■□□□□ 0.42
SHROOM2-201ENST00000380913 PTPN14Q15678 1187 aa17.69■□□□□ 0.42
SHROOM2-201ENST00000380913 CRACR2BQ8N4Y2 399 aaPredicted RBP17.69■□□□□ 0.42
SHROOM2-201ENST00000380913 IMMTQ16891 758 aaKnown RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms