RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 CHL1O00533 1208 aa22.35■■□□□ 1.17
THUMPD2-201ENST00000378727 VAMP4O75379 141 aa22.35■■□□□ 1.17
THUMPD2-201ENST00000378727 LRRC37A3O60309 1634 aa22.34■■□□□ 1.17
THUMPD2-201ENST00000378727 RLBP1P12271 317 aa22.34■■□□□ 1.17
THUMPD2-201ENST00000378727 RTF1Q92541 710 aaKnown RBP22.34■■□□□ 1.17
THUMPD2-201ENST00000378727 ALDH1L2Q3SY69 923 aa22.33■■□□□ 1.17
THUMPD2-201ENST00000378727 C8orf58Q8NAV2 365 aa22.33■■□□□ 1.17
THUMPD2-201ENST00000378727 HTATSF1O43719 755 aaKnown RBP22.32■■□□□ 1.16
THUMPD2-201ENST00000378727 ZNF428Q96B54 188 aa22.32■■□□□ 1.16
THUMPD2-201ENST00000378727 COG6Q9Y2V7 657 aa22.32■■□□□ 1.16
THUMPD2-201ENST00000378727 ZKSCAN2Q63HK3 967 aa22.32■■□□□ 1.16
THUMPD2-201ENST00000378727 TSHZ2Q9NRE2 1034 aa22.32■■□□□ 1.16
THUMPD2-201ENST00000378727 NHSL1Q5SYE7 1610 aa22.31■■□□□ 1.16
THUMPD2-201ENST00000378727 MAP3K5Q99683 1374 aa22.31■■□□□ 1.16
THUMPD2-201ENST00000378727 GNAT3A8MTJ3 354 aa22.31■■□□□ 1.16
THUMPD2-201ENST00000378727 LMO7Q8WWI1 1683 aa22.31■■□□□ 1.16
THUMPD2-201ENST00000378727 ERBB3P21860 1342 aa22.31■■□□□ 1.16
THUMPD2-201ENST00000378727 ELL2O00472 640 aaPredicted RBP22.3■■□□□ 1.16
THUMPD2-201ENST00000378727 TWISTNBQ3B726 338 aaPredicted RBP22.3■■□□□ 1.16
THUMPD2-201ENST00000378727 CLUAP1Q96AJ1 413 aa22.29■■□□□ 1.16
THUMPD2-201ENST00000378727 NOB1Q9ULX3 412 aaKnown RBP22.29■■□□□ 1.16
THUMPD2-201ENST00000378727 ABCC6O95255 1503 aa22.29■■□□□ 1.16
THUMPD2-201ENST00000378727 CPDO75976 1380 aa22.28■■□□□ 1.16
THUMPD2-201ENST00000378727 BRPF1P55201 1214 aaPredicted RBP22.28■■□□□ 1.16
THUMPD2-201ENST00000378727 IL17REQ8NFR9 667 aa22.28■■□□□ 1.16
THUMPD2-201ENST00000378727 TRIM27P14373 513 aa22.27■■□□□ 1.16
THUMPD2-201ENST00000378727 KIAA0232Q92628 1395 aa22.27■■□□□ 1.16
THUMPD2-201ENST00000378727 LTBP4Q8N2S1 1624 aa22.27■■□□□ 1.16
THUMPD2-201ENST00000378727 KRT24Q2M2I5 525 aa22.27■■□□□ 1.16
THUMPD2-201ENST00000378727 MIS18AQ9NYP9 233 aa22.27■■□□□ 1.16
THUMPD2-201ENST00000378727 KIF16BQ96L93 1317 aa22.27■■□□□ 1.16
THUMPD2-201ENST00000378727 CHRNA2Q15822 529 aa22.26■■□□□ 1.15
THUMPD2-201ENST00000378727 ATF7IPQ6VMQ6 1270 aa22.26■■□□□ 1.15
THUMPD2-201ENST00000378727 DZIP1LQ8IYY4 767 aaKnown RBP22.26■■□□□ 1.15
THUMPD2-201ENST00000378727 MRPL50Q8N5N7 158 aaKnown RBP22.26■■□□□ 1.15
THUMPD2-201ENST00000378727 KDM2BQ8NHM5 1336 aa22.25■■□□□ 1.15
THUMPD2-201ENST00000378727 ABCA3Q99758 1704 aa22.25■■□□□ 1.15
THUMPD2-201ENST00000378727 FAM208AQ9UK61 1670 aaKnown RBP22.24■■□□□ 1.15
THUMPD2-201ENST00000378727 FTSJ3Q8IY81 847 aaKnown RBP22.23■■□□□ 1.15
THUMPD2-201ENST00000378727 TSPYL4Q9UJ04 414 aa22.23■■□□□ 1.15
THUMPD2-201ENST00000378727 MS4A1P11836 297 aa22.22■■□□□ 1.15
THUMPD2-201ENST00000378727 MVPQ14764 893 aaKnown RBP22.22■■□□□ 1.15
THUMPD2-201ENST00000378727 PLEKHO1Q53GL0 409 aaPredicted RBP22.22■■□□□ 1.15
THUMPD2-201ENST00000378727 CEMIPQ8WUJ3 1361 aa22.22■■□□□ 1.15
THUMPD2-201ENST00000378727 TCERG1O14776 1098 aaKnown RBP22.22■■□□□ 1.15
THUMPD2-201ENST00000378727 IPO8O15397 1037 aaKnown RBP22.22■■□□□ 1.15
THUMPD2-201ENST00000378727 AMOTQ4VCS5 1084 aa22.21■■□□□ 1.15
THUMPD2-201ENST00000378727 ZNF530Q6P9A1 599 aaPredicted RBP22.21■■□□□ 1.15
THUMPD2-201ENST00000378727 NLRP2Q9NX02 1062 aa22.21■■□□□ 1.15
THUMPD2-201ENST00000378727 AKAP4Q5JQC9 854 aa22.19■■□□□ 1.14
THUMPD2-201ENST00000378727 ROBO1Q9Y6N7 1651 aa22.19■■□□□ 1.14
THUMPD2-201ENST00000378727 VIRMAQ69YN4 1812 aaKnown RBP22.19■■□□□ 1.14
THUMPD2-201ENST00000378727 AAMPQ13685 434 aa22.19■■□□□ 1.14
THUMPD2-201ENST00000378727 LGR6Q9HBX8 967 aa22.19■■□□□ 1.14
THUMPD2-201ENST00000378727 TAF7Q15545 349 aaPredicted RBP22.18■■□□□ 1.14
THUMPD2-201ENST00000378727 CENPQQ7L2Z9 268 aaPredicted RBP22.18■■□□□ 1.14
THUMPD2-201ENST00000378727 ARHGAP45Q92619 1136 aa22.18■■□□□ 1.14
THUMPD2-201ENST00000378727 CSB-PGBD3P0DP91 1061 aa22.17■■□□□ 1.14
THUMPD2-201ENST00000378727 TMEM57Q8N5G2 664 aa22.17■■□□□ 1.14
THUMPD2-201ENST00000378727 BABAM1Q9NWV8 329 aa22.17■■□□□ 1.14
THUMPD2-201ENST00000378727 PRDM11Q9NQV5 511 aa22.16■■□□□ 1.14
THUMPD2-201ENST00000378727 HAP1P54257 671 aaPredicted RBP22.16■■□□□ 1.14
THUMPD2-201ENST00000378727 MEGF6O75095 1541 aa22.15■■□□□ 1.14
THUMPD2-201ENST00000378727 IGHDP01880 384 aa22.15■■□□□ 1.14
THUMPD2-201ENST00000378727 MPRIPQ6WCQ1 1025 aa22.15■■□□□ 1.14
THUMPD2-201ENST00000378727 ITPRIPQ8IWB1 547 aa22.15■■□□□ 1.14
THUMPD2-201ENST00000378727 PCDHB15Q9Y5E8 787 aa22.15■■□□□ 1.14
THUMPD2-201ENST00000378727 C1orf141Q5JVX7 400 aa22.14■■□□□ 1.13
THUMPD2-201ENST00000378727 RAPGEF4Q8WZA2 1011 aa22.14■■□□□ 1.13
THUMPD2-201ENST00000378727 AHDC1Q5TGY3 1603 aaPredicted RBP22.13■■□□□ 1.13
THUMPD2-201ENST00000378727 DDX19BQ9UMR2 479 aa22.13■■□□□ 1.13
THUMPD2-201ENST00000378727 ADAMTS7Q9UKP4 1686 aa22.13■■□□□ 1.13
THUMPD2-201ENST00000378727 KDM3BQ7LBC6 1761 aa22.13■■□□□ 1.13
THUMPD2-201ENST00000378727 RNMTO43148 476 aaKnown RBP22.12■■□□□ 1.13
THUMPD2-201ENST00000378727 SKAP1Q86WV1 359 aa22.12■■□□□ 1.13
THUMPD2-201ENST00000378727 OVOS2A0A0G2JMS6 1433 aa22.12■■□□□ 1.13
THUMPD2-201ENST00000378727 COL5A2P05997 1499 aaPredicted RBP22.12■■□□□ 1.13
THUMPD2-201ENST00000378727 ABCC4O15439 1325 aa22.11■■□□□ 1.13
THUMPD2-201ENST00000378727 TATP17735 454 aaPredicted RBP22.11■■□□□ 1.13
THUMPD2-201ENST00000378727 WDR17Q8IZU2 1322 aa22.1■■□□□ 1.13
THUMPD2-201ENST00000378727 SIPA1L3O60292 1781 aaPredicted RBP22.09■■□□□ 1.13
THUMPD2-201ENST00000378727 PKD1L3Q7Z443 1732 aa22.09■■□□□ 1.13
THUMPD2-201ENST00000378727 PLEKHG2Q9H7P9 1386 aa22.09■■□□□ 1.13
THUMPD2-201ENST00000378727 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.09■■□□□ 1.132e-7■■□□□ 14.5
THUMPD2-201ENST00000378727 RGS12O14924 1447 aa22.08■■□□□ 1.13
THUMPD2-201ENST00000378727 TEFQ10587 303 aa22.08■■□□□ 1.13
THUMPD2-201ENST00000378727 API5Q9BZZ5 524 aaKnown RBP22.08■■□□□ 1.13
THUMPD2-201ENST00000378727 ZBTB40Q9NUA8 1239 aa22.08■■□□□ 1.12
THUMPD2-201ENST00000378727 SLC4A2P04920 1241 aa22.07■■□□□ 1.12
THUMPD2-201ENST00000378727 SPG7Q9UQ90 795 aa22.07■■□□□ 1.12
THUMPD2-201ENST00000378727 SCN11AQ9UI33 1791 aa22.07■■□□□ 1.12
THUMPD2-201ENST00000378727 SOS1Q07889 1333 aaPredicted RBP22.06■■□□□ 1.12
THUMPD2-201ENST00000378727 COL22A1Q8NFW1 1626 aaPredicted RBP22.06■■□□□ 1.12
THUMPD2-201ENST00000378727 KCNQ3O43525 872 aa22.05■■□□□ 1.12
THUMPD2-201ENST00000378727 PHKG2P15735 406 aa22.05■■□□□ 1.12
THUMPD2-201ENST00000378727 EIF4A1P60842 406 aaKnown RBP22.05■■□□□ 1.12
THUMPD2-201ENST00000378727 KDM6AO15550 1401 aaPredicted RBP22.05■■□□□ 1.12
THUMPD2-201ENST00000378727 BTBD11A6QL63 1104 aa22.05■■□□□ 1.12
THUMPD2-201ENST00000378727 TOM1L2Q6ZVM7 507 aa22.05■■□□□ 1.12
THUMPD2-201ENST00000378727 RBM19Q9Y4C8 960 aaKnown RBP22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms