RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 HSP90AB2PQ58FF8 381 aa22.6■■□□□ 1.21
TDP2-202ENST00000378198 ARHGEF10O15013 1369 aa22.6■■□□□ 1.21
TDP2-202ENST00000378198 CRB1P82279 1406 aa22.59■■□□□ 1.21
TDP2-202ENST00000378198 FAM43AQ8N2R8 423 aa22.59■■□□□ 1.21
TDP2-202ENST00000378198 TTC21AQ8NDW8 1320 aa22.59■■□□□ 1.21
TDP2-202ENST00000378198 GOLGA6L3A6NEY3 463 aa22.58■■□□□ 1.21
TDP2-202ENST00000378198 GSPT1P15170 499 aaKnown RBP22.58■■□□□ 1.21
TDP2-202ENST00000378198 KRT24Q2M2I5 525 aa22.58■■□□□ 1.21
TDP2-202ENST00000378198 TTC22Q5TAA0 569 aa22.58■■□□□ 1.21
TDP2-202ENST00000378198 FSD2A1L4K1 749 aa22.58■■□□□ 1.2
TDP2-202ENST00000378198 LTKP29376 864 aa22.58■■□□□ 1.2
TDP2-202ENST00000378198 K7ELQ4 463 aaPredicted RBP22.57■■□□□ 1.2
TDP2-202ENST00000378198 CEP85Q6P2H3 762 aa22.56■■□□□ 1.2
TDP2-202ENST00000378198 PTPRUQ92729 1446 aa22.56■■□□□ 1.2
TDP2-202ENST00000378198 RTL1A6NKG5 1358 aa22.56■■□□□ 1.2
TDP2-202ENST00000378198 MSH6P52701 1360 aa22.56■■□□□ 1.2
TDP2-202ENST00000378198 NUTM2FA1L443 756 aa22.56■■□□□ 1.2
TDP2-202ENST00000378198 RAB3GAP1Q15042 981 aa22.55■■□□□ 1.2
TDP2-202ENST00000378198 RGPD8O14715 1765 aaPredicted RBP22.55■■□□□ 1.2
TDP2-202ENST00000378198 TNPO1Q92973 898 aaKnown RBP22.54■■□□□ 1.2
TDP2-202ENST00000378198 GBP4Q96PP9 640 aa22.54■■□□□ 1.2
TDP2-202ENST00000378198 RIMS1Q86UR5 1692 aaKnown RBP22.54■■□□□ 1.2
TDP2-202ENST00000378198 HSP90AA1P07900 732 aaKnown RBP22.54■■□□□ 1.2
TDP2-202ENST00000378198 SBNO1A3KN83 1393 aa22.53■■□□□ 1.2
TDP2-202ENST00000378198 FLT4P35916 1363 aa22.53■■□□□ 1.2
TDP2-202ENST00000378198 PTMSP20962 102 aa22.53■■□□□ 1.2
TDP2-202ENST00000378198 EID1Q9Y6B2 187 aa22.53■■□□□ 1.2
TDP2-202ENST00000378198 MAP3K19Q56UN5 1328 aa22.52■■□□□ 1.2
TDP2-202ENST00000378198 CD2BP2O95400 341 aaKnown RBP22.52■■□□□ 1.2
TDP2-202ENST00000378198 SLC4A2P04920 1241 aa22.52■■□□□ 1.2
TDP2-202ENST00000378198 RTF1Q92541 710 aaKnown RBP22.52■■□□□ 1.2
TDP2-202ENST00000378198 GZF1Q9H116 711 aaPredicted RBP22.52■■□□□ 1.2
TDP2-202ENST00000378198 KDRP35968 1356 aa22.52■■□□□ 1.2
TDP2-202ENST00000378198 C16orf71Q8IYS4 520 aaPredicted RBP22.51■■□□□ 1.19
TDP2-202ENST00000378198 XRCC6P12956 609 aaKnown RBP eCLIP22.51■■□□□ 1.19
TDP2-202ENST00000378198 MTHFSDQ2M296 383 aaKnown RBP22.51■■□□□ 1.19
TDP2-202ENST00000378198 RABEP1Q15276 862 aa22.5■■□□□ 1.19
TDP2-202ENST00000378198 MEIS3Q99687 375 aa22.5■■□□□ 1.19
TDP2-202ENST00000378198 RBM42Q9BTD8 480 aaKnown RBP22.5■■□□□ 1.19
TDP2-202ENST00000378198 SLIT1O75093 1534 aa22.5■■□□□ 1.19
TDP2-202ENST00000378198 SLC26A8Q96RN1 970 aa22.5■■□□□ 1.19
TDP2-202ENST00000378198 ISY1Q9ULR0 285 aaKnown RBP22.5■■□□□ 1.19
TDP2-202ENST00000378198 AMOTL2Q9Y2J4 779 aa22.5■■□□□ 1.19
TDP2-202ENST00000378198 CACNA1FO60840 1977 aa22.49■■□□□ 1.19
TDP2-202ENST00000378198 HMMRO75330 724 aa22.49■■□□□ 1.19
TDP2-202ENST00000378198 CASC1Q6TDU7 716 aa22.49■■□□□ 1.19
TDP2-202ENST00000378198 TSPYL4Q9UJ04 414 aa22.49■■□□□ 1.19
TDP2-202ENST00000378198 DIP2AQ14689 1571 aa22.49■■□□□ 1.19
TDP2-202ENST00000378198 SOX12O15370 315 aa22.48■■□□□ 1.19
TDP2-202ENST00000378198 CCT4P50991 539 aaKnown RBP22.48■■□□□ 1.19
TDP2-202ENST00000378198 SKOR2Q2VWA4 1001 aaPredicted RBP22.48■■□□□ 1.19
TDP2-202ENST00000378198 GAS2L2Q8NHY3 880 aa22.48■■□□□ 1.19
TDP2-202ENST00000378198 TBX22Q9Y458 520 aa22.48■■□□□ 1.19
TDP2-202ENST00000378198 PIK3C2AO00443 1686 aa22.48■■□□□ 1.19
TDP2-202ENST00000378198 ARHGAP23Q9P227 1491 aa22.48■■□□□ 1.19
TDP2-202ENST00000378198 USP26Q9BXU7 913 aa22.48■■□□□ 1.19
TDP2-202ENST00000378198 IGSF1Q8N6C5 1336 aa22.47■■□□□ 1.19
TDP2-202ENST00000378198 MRE11P49959 708 aa22.47■■□□□ 1.19
TDP2-202ENST00000378198 LRRC37A3O60309 1634 aa22.47■■□□□ 1.19
TDP2-202ENST00000378198 HTATSF1O43719 755 aaKnown RBP22.46■■□□□ 1.19
TDP2-202ENST00000378198 FOXO3O43524 673 aa22.46■■□□□ 1.19
TDP2-202ENST00000378198 AMPHP49418 695 aa22.46■■□□□ 1.19
TDP2-202ENST00000378198 NGDNQ8NEJ9 315 aaKnown RBP22.46■■□□□ 1.19
TDP2-202ENST00000378198 MIS18AQ9NYP9 233 aa22.46■■□□□ 1.19
TDP2-202ENST00000378198 SDSP20132 328 aa22.45■■□□□ 1.18
TDP2-202ENST00000378198 CEP170BQ9Y4F5 1589 aaPredicted RBP22.45■■□□□ 1.18
TDP2-202ENST00000378198 OTUD7AQ8TE49 926 aaPredicted RBP22.45■■□□□ 1.18
TDP2-202ENST00000378198 EYA1Q99502 592 aa22.45■■□□□ 1.18
TDP2-202ENST00000378198 FAM208AQ9UK61 1670 aaKnown RBP22.45■■□□□ 1.18
TDP2-202ENST00000378198 SMARCA5O60264 1052 aaPredicted RBP22.44■■□□□ 1.18
TDP2-202ENST00000378198 FOXD4L1Q9NU39 408 aa22.44■■□□□ 1.18
TDP2-202ENST00000378198 CLEC17AQ6ZS10 378 aa22.43■■□□□ 1.18
TDP2-202ENST00000378198 G2E3Q7L622 706 aa22.43■■□□□ 1.18
TDP2-202ENST00000378198 USP54Q70EL1 1684 aa22.43■■□□□ 1.18
TDP2-202ENST00000378198 STK31Q9BXU1 1019 aa22.43■■□□□ 1.18
TDP2-202ENST00000378198 OSBPL3Q9H4L5 887 aa22.43■■□□□ 1.18
TDP2-202ENST00000378198 N4BP2Q86UW6 1770 aaPredicted RBP22.43■■□□□ 1.18
TDP2-202ENST00000378198 SLC4A10Q6U841 1118 aa22.42■■□□□ 1.18
TDP2-202ENST00000378198 ARXQ96QS3 562 aa22.42■■□□□ 1.18
TDP2-202ENST00000378198 XRN1Q8IZH2 1706 aaKnown RBP22.41■■□□□ 1.18
TDP2-202ENST00000378198 MARF1Q9Y4F3 1742 aaKnown RBP22.41■■□□□ 1.18
TDP2-202ENST00000378198 APBB1O00213 710 aa22.41■■□□□ 1.18
TDP2-202ENST00000378198 CEBPAP49715 358 aaPredicted RBP22.41■■□□□ 1.18
TDP2-202ENST00000378198 AK9Q5TCS8 1911 aa22.41■■□□□ 1.18
TDP2-202ENST00000378198 REC8O95072 547 aa22.4■■□□□ 1.18
TDP2-202ENST00000378198 GRPEL1Q9HAV7 217 aa22.4■■□□□ 1.18
TDP2-202ENST00000378198 TUBGCP6Q96RT7 1819 aa22.4■■□□□ 1.18
TDP2-202ENST00000378198 ANKARQ7Z5J8 1434 aa22.4■■□□□ 1.18
TDP2-202ENST00000378198 SOS1Q07889 1333 aaPredicted RBP22.4■■□□□ 1.18
TDP2-202ENST00000378198 F6X3S4 739 aa22.4■■□□□ 1.18
TDP2-202ENST00000378198 GOLGA6L22H0YM25 854 aa22.4■■□□□ 1.18
TDP2-202ENST00000378198 GNAI2P04899 355 aa22.4■■□□□ 1.18
TDP2-202ENST00000378198 SSFA2P28290 1259 aa22.38■■□□□ 1.17
TDP2-202ENST00000378198 CCDC30Q5VVM6 783 aa22.38■■□□□ 1.17
TDP2-202ENST00000378198 GNAT3A8MTJ3 354 aa22.38■■□□□ 1.17
TDP2-202ENST00000378198 PANK2Q9BZ23 570 aa22.38■■□□□ 1.17
TDP2-202ENST00000378198 ANO8Q9HCE9 1232 aaPredicted RBP22.37■■□□□ 1.17
TDP2-202ENST00000378198 ERC2O15083 957 aa22.37■■□□□ 1.17
TDP2-202ENST00000378198 ST18O60284 1047 aa22.37■■□□□ 1.17
TDP2-202ENST00000378198 GNAI3P08754 354 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms