RNA–Protein interactions for RNA: ENST00000377200.9

PTAR1-202, Transcript of protein prenyltransferase alpha subunit repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene PTAR1, Length 9,876 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTAR1-202ENST00000377200 TRIM5Q9C035 493 aa4.85□□□□□ -1.63
PTAR1-202ENST00000377200 BCCIPQ9P287 314 aaKnown RBP eCLIP4.85□□□□□ -1.63
PTAR1-202ENST00000377200 A2ML1A8K2U0 1454 aa4.85□□□□□ -1.63
PTAR1-202ENST00000377200 TULP1O00294 542 aaPredicted RBP4.85□□□□□ -1.63
PTAR1-202ENST00000377200 DHX8Q14562 1220 aaKnown RBP4.85□□□□□ -1.63
PTAR1-202ENST00000377200 DIP2AQ14689 1571 aa4.85□□□□□ -1.63
PTAR1-202ENST00000377200 TTC31Q49AM3 519 aaPredicted RBP4.85□□□□□ -1.63
PTAR1-202ENST00000377200 FBXO31Q5XUX0 539 aaPredicted RBP4.85□□□□□ -1.63
PTAR1-202ENST00000377200 ZKSCAN2Q63HK3 967 aa4.85□□□□□ -1.63
PTAR1-202ENST00000377200 CREBRFQ8IUR6 639 aa4.85□□□□□ -1.63
PTAR1-202ENST00000377200 MYO3AQ8NEV4 1616 aa4.85□□□□□ -1.63
PTAR1-202ENST00000377200 SARNPP82979 210 aaKnown RBP4.85□□□□□ -1.63
PTAR1-202ENST00000377200 CWC22Q9HCG8 908 aaKnown RBP4.85□□□□□ -1.63
PTAR1-202ENST00000377200 CERS3Q8IU89 383 aa4.85□□□□□ -1.63
PTAR1-202ENST00000377200 SMC4Q9NTJ3 1288 aa4.85□□□□□ -1.63
PTAR1-202ENST00000377200 FOXD4L6Q3SYB3 417 aaPredicted RBP4.85□□□□□ -1.63
PTAR1-202ENST00000377200 CFAP70Q5T0N1 1121 aa4.85□□□□□ -1.63
PTAR1-202ENST00000377200 TTLL5Q6EMB2 1281 aa4.85□□□□□ -1.63
PTAR1-202ENST00000377200 FOXD4L3Q6VB84 417 aaPredicted RBP4.85□□□□□ -1.63
PTAR1-202ENST00000377200 PUS7Q96PZ0 661 aaKnown RBP4.85□□□□□ -1.63
PTAR1-202ENST00000377200 TERF2IPQ9NYB0 399 aa4.85□□□□□ -1.63
PTAR1-202ENST00000377200 KIF2AO00139 706 aaPredicted RBP4.85□□□□□ -1.63
PTAR1-202ENST00000377200 RABEP1Q15276 862 aa4.85□□□□□ -1.63
PTAR1-202ENST00000377200 ANKLE2Q86XL3 938 aa4.85□□□□□ -1.63
PTAR1-202ENST00000377200 HMGB1P09429 215 aaKnown RBP4.84□□□□□ -1.63
PTAR1-202ENST00000377200 UVSSAQ2YD98 709 aa4.84□□□□□ -1.63
PTAR1-202ENST00000377200 SPC24Q8NBT2 197 aa4.84□□□□□ -1.63
PTAR1-202ENST00000377200 SHTN1A0MZ66 631 aa4.84□□□□□ -1.63
PTAR1-202ENST00000377200 NOLC1Q14978 699 aaKnown RBP eCLIP4.84□□□□□ -1.63
PTAR1-202ENST00000377200 DDX11Q96FC9 970 aa4.84□□□□□ -1.63
PTAR1-202ENST00000377200 APBB1O00213 710 aa4.84□□□□□ -1.63
PTAR1-202ENST00000377200 TXNDC2Q86VQ3 553 aa4.84□□□□□ -1.63
PTAR1-202ENST00000377200 ADGRF5Q8IZF2 1346 aa4.84□□□□□ -1.63
PTAR1-202ENST00000377200 IVLP07476 585 aa4.84□□□□□ -1.63
PTAR1-202ENST00000377200 ATAD2Q6PL18 1390 aa4.84□□□□□ -1.63
PTAR1-202ENST00000377200 TMEM2Q9UHN6 1383 aa4.84□□□□□ -1.63
PTAR1-202ENST00000377200 POLR3GO15318 223 aaPredicted RBP4.84□□□□□ -1.63
PTAR1-202ENST00000377200 UBXN4Q92575 508 aa4.84□□□□□ -1.63
PTAR1-202ENST00000377200 TNPO1Q92973 898 aaKnown RBP4.84□□□□□ -1.63
PTAR1-202ENST00000377200 ARHGEF28Q8N1W1 1705 aaKnown RBP4.84□□□□□ -1.64
PTAR1-202ENST00000377200 MNAT1P51948 309 aa4.84□□□□□ -1.64
PTAR1-202ENST00000377200 SRPK2P78362 688 aaKnown RBP4.84□□□□□ -1.64
PTAR1-202ENST00000377200 ZNF397Q8NF99 534 aaPredicted RBP4.84□□□□□ -1.64
PTAR1-202ENST00000377200 TBC1D2Q9BYX2 928 aa4.84□□□□□ -1.64
PTAR1-202ENST00000377200 TRAK1Q9UPV9 953 aa4.84□□□□□ -1.64
PTAR1-202ENST00000377200 HDGFL2Q7Z4V5 671 aaPredicted RBP4.84□□□□□ -1.64
PTAR1-202ENST00000377200 CEP170BQ9Y4F5 1589 aaPredicted RBP4.84□□□□□ -1.64
PTAR1-202ENST00000377200 KLHL40Q2TBA0 621 aa4.83□□□□□ -1.64
PTAR1-202ENST00000377200 RTF1Q92541 710 aaKnown RBP4.83□□□□□ -1.64
PTAR1-202ENST00000377200 TOMM22Q9NS69 142 aa4.83□□□□□ -1.64
PTAR1-202ENST00000377200 ZNF142P52746 1687 aaPredicted RBP4.83□□□□□ -1.64
PTAR1-202ENST00000377200 CCDC146Q8IYE0 955 aa4.83□□□□□ -1.64
PTAR1-202ENST00000377200 STK11IPQ8N1F8 1099 aa4.83□□□□□ -1.64
PTAR1-202ENST00000377200 CCDC102AQ96A19 550 aa4.83□□□□□ -1.64
PTAR1-202ENST00000377200 DRC1Q96MC2 740 aa4.83□□□□□ -1.64
PTAR1-202ENST00000377200 ADAMTSL3P82987 1691 aa4.83□□□□□ -1.64
PTAR1-202ENST00000377200 PES1O00541 588 aaKnown RBP4.83□□□□□ -1.64
PTAR1-202ENST00000377200 BICD2Q8TD16 824 aa4.83□□□□□ -1.64
PTAR1-202ENST00000377200 STK26Q9P289 416 aa4.83□□□□□ -1.64
PTAR1-202ENST00000377200 IBSPP21815 317 aaPredicted RBP4.83□□□□□ -1.64
PTAR1-202ENST00000377200 RRP12Q5JTH9 1297 aaKnown RBP4.83□□□□□ -1.64
PTAR1-202ENST00000377200 KNDC1Q76NI1 1749 aa4.83□□□□□ -1.64
PTAR1-202ENST00000377200 REC8O95072 547 aa4.83□□□□□ -1.64
PTAR1-202ENST00000377200 TICAM2Q86XR7 235 aa4.83□□□□□ -1.64
PTAR1-202ENST00000377200 NOL7Q9UMY1 257 aaKnown RBP4.83□□□□□ -1.64
PTAR1-202ENST00000377200 HMMRO75330 724 aa4.83□□□□□ -1.64
PTAR1-202ENST00000377200 LMAN1P49257 510 aa4.83□□□□□ -1.64
PTAR1-202ENST00000377200 OS9Q13438 667 aaPredicted RBP4.83□□□□□ -1.64
PTAR1-202ENST00000377200 RSPH14Q9UHP6 348 aa4.83□□□□□ -1.64
PTAR1-202ENST00000377200 YTHDC2Q9H6S0 1430 aaKnown RBP4.83□□□□□ -1.64
PTAR1-202ENST00000377200 DLC1Q96QB1 1528 aa4.83□□□□□ -1.64
PTAR1-202ENST00000377200 PLEKHG1Q9ULL1 1385 aa4.83□□□□□ -1.64
PTAR1-202ENST00000377200 SYCE3A1L190 88 aa4.82□□□□□ -1.64
PTAR1-202ENST00000377200 ANKRD45Q5TZF3 282 aa4.82□□□□□ -1.64
PTAR1-202ENST00000377200 ALKQ9UM73 1620 aa4.82□□□□□ -1.64
PTAR1-202ENST00000377200 INTS3Q68E01 1043 aaKnown RBP4.82□□□□□ -1.64
PTAR1-202ENST00000377200 GBP3Q9H0R5 595 aa4.82□□□□□ -1.64
PTAR1-202ENST00000377200 DDX19BQ9UMR2 479 aa4.82□□□□□ -1.64
PTAR1-202ENST00000377200 LRPPRCP42704 1394 aaKnown RBP4.82□□□□□ -1.64
PTAR1-202ENST00000377200 ITSN1Q15811 1721 aa4.82□□□□□ -1.64
PTAR1-202ENST00000377200 C10orf67Q8IYJ2 551 aa4.82□□□□□ -1.64
PTAR1-202ENST00000377200 CCDC192P0DO97 292 aa4.82□□□□□ -1.64
PTAR1-202ENST00000377200 NUTM2DQ5VT03 806 aaPredicted RBP4.82□□□□□ -1.64
PTAR1-202ENST00000377200 MORC1Q86VD1 984 aa4.82□□□□□ -1.64
PTAR1-202ENST00000377200 EFCC1Q9HA90 598 aa4.82□□□□□ -1.64
PTAR1-202ENST00000377200 PAXBP1Q9Y5B6 917 aa4.82□□□□□ -1.64
PTAR1-202ENST00000377200 GOLIM4O00461 696 aa4.82□□□□□ -1.64
PTAR1-202ENST00000377200 SSFA2P28290 1259 aa4.82□□□□□ -1.64
PTAR1-202ENST00000377200 CENPHQ9H3R5 247 aa4.82□□□□□ -1.64
PTAR1-202ENST00000377200 CT47B1P0C2W7 299 aaPredicted RBP4.82□□□□□ -1.64
PTAR1-202ENST00000377200 TEX2Q8IWB9 1127 aa4.82□□□□□ -1.64
PTAR1-202ENST00000377200 PIK3R4Q99570 1358 aa4.82□□□□□ -1.64
PTAR1-202ENST00000377200 LIG1P18858 919 aa4.82□□□□□ -1.64
PTAR1-202ENST00000377200 ZRSR2Q15696 482 aaKnown RBP4.82□□□□□ -1.64
PTAR1-202ENST00000377200 MYRIPQ8NFW9 859 aa4.82□□□□□ -1.64
PTAR1-202ENST00000377200 PTPN14Q15678 1187 aa4.81□□□□□ -1.64
PTAR1-202ENST00000377200 MICALCLQ6ZW33 695 aa4.81□□□□□ -1.64
PTAR1-202ENST00000377200 DZIP1LQ8IYY4 767 aaKnown RBP4.81□□□□□ -1.64
PTAR1-202ENST00000377200 NGEFQ8N5V2 710 aa4.81□□□□□ -1.64
PTAR1-202ENST00000377200 GOLGA6L7A0A1B0GV03 622 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms