RNA–Protein interactions for RNA: ENST00000377115.4

FOXA2-201, Transcript of forkhead box A2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXA2, Length 2,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2-201ENST00000377115 DCTN1Q14203 1278 aa28.29■■■□□ 2.12
FOXA2-201ENST00000377115 TMEM63CQ9P1W3 806 aa28.29■■■□□ 2.12
FOXA2-201ENST00000377115 ARHGEF40Q8TER5 1519 aa28.29■■■□□ 2.12
FOXA2-201ENST00000377115 TERF1P54274 439 aa28.29■■■□□ 2.12
FOXA2-201ENST00000377115 ANKRD44Q8N8A2 993 aa28.29■■■□□ 2.12
FOXA2-201ENST00000377115 NSFL1CQ9UNZ2 370 aaKnown RBP28.29■■■□□ 2.12
FOXA2-201ENST00000377115 KIF24Q5T7B8 1368 aa28.28■■■□□ 2.12
FOXA2-201ENST00000377115 DLG5Q8TDM6 1919 aa28.28■■■□□ 2.12
FOXA2-201ENST00000377115 FOXD4L5Q5VV16 416 aaPredicted RBP28.27■■■□□ 2.12
FOXA2-201ENST00000377115 FOXD4L4Q8WXT5 416 aaPredicted RBP28.27■■■□□ 2.12
FOXA2-201ENST00000377115 RIMS2Q9UQ26 1411 aa28.27■■■□□ 2.12
FOXA2-201ENST00000377115 SYCE3A1L190 88 aa28.27■■■□□ 2.12
FOXA2-201ENST00000377115 CEP85Q6P2H3 762 aa28.26■■■□□ 2.11
FOXA2-201ENST00000377115 CASC1Q6TDU7 716 aa28.26■■■□□ 2.11
FOXA2-201ENST00000377115 LRSAM1Q6UWE0 723 aa28.24■■■□□ 2.11
FOXA2-201ENST00000377115 FAM13BQ9NYF5 915 aa28.24■■■□□ 2.11
FOXA2-201ENST00000377115 ZKSCAN5Q9Y2L8 839 aa28.24■■■□□ 2.11
FOXA2-201ENST00000377115 KRT24Q2M2I5 525 aa28.23■■■□□ 2.11
FOXA2-201ENST00000377115 RGS12O14924 1447 aa28.22■■■□□ 2.11
FOXA2-201ENST00000377115 LMOD3Q0VAK6 560 aa28.22■■■□□ 2.11
FOXA2-201ENST00000377115 ZRANB1Q9UGI0 708 aa28.22■■■□□ 2.11
FOXA2-201ENST00000377115 MSH6P52701 1360 aa28.21■■■□□ 2.11
FOXA2-201ENST00000377115 SLC52A1Q9NWF4 448 aa28.21■■■□□ 2.11
FOXA2-201ENST00000377115 UQCRHLA0A096LP55 91 aa28.21■■■□□ 2.11
FOXA2-201ENST00000377115 REC8O95072 547 aa28.21■■■□□ 2.11
FOXA2-201ENST00000377115 UQCRHP07919 91 aa28.21■■■□□ 2.11
FOXA2-201ENST00000377115 RPAP2Q8IXW5 612 aaPredicted RBP28.21■■■□□ 2.11
FOXA2-201ENST00000377115 RAPGEF3O95398 923 aa28.2■■■□□ 2.1
FOXA2-201ENST00000377115 TMEM131LA2VDJ0 1609 aa28.19■■■□□ 2.1
FOXA2-201ENST00000377115 NME9Q86XW9 330 aa28.19■■■□□ 2.1
FOXA2-201ENST00000377115 RNF214Q8ND24 703 aa28.19■■■□□ 2.1
FOXA2-201ENST00000377115 RTL1A6NKG5 1358 aa28.19■■■□□ 2.1
FOXA2-201ENST00000377115 ERC2O15083 957 aa28.19■■■□□ 2.1
FOXA2-201ENST00000377115 MEIS3Q99687 375 aa28.18■■■□□ 2.1
FOXA2-201ENST00000377115 CDK12Q9NYV4 1490 aaPredicted RBP28.17■■■□□ 2.1
FOXA2-201ENST00000377115 WAPLQ7Z5K2 1190 aa28.17■■■□□ 2.1
FOXA2-201ENST00000377115 ATP7BP35670 1465 aa28.17■■■□□ 2.1
FOXA2-201ENST00000377115 ALKQ9UM73 1620 aa28.17■■■□□ 2.1
FOXA2-201ENST00000377115 RRS1Q15050 365 aaKnown RBP28.16■■■□□ 2.1
FOXA2-201ENST00000377115 TMX3Q96JJ7 454 aa28.16■■■□□ 2.1
FOXA2-201ENST00000377115 NEK4P51957 841 aa28.15■■■□□ 2.1
FOXA2-201ENST00000377115 CCDC39Q9UFE4 941 aa28.14■■■□□ 2.1
FOXA2-201ENST00000377115 CPSF1Q10570 1443 aaKnown RBP28.13■■■□□ 2.09
FOXA2-201ENST00000377115 MCM5P33992 734 aa28.12■■■□□ 2.09
FOXA2-201ENST00000377115 CSPP1Q1MSJ5 1256 aa28.12■■■□□ 2.09
FOXA2-201ENST00000377115 MBD3O95983 291 aa28.11■■■□□ 2.09
FOXA2-201ENST00000377115 DIP2CQ9Y2E4 1556 aa28.11■■■□□ 2.09
FOXA2-201ENST00000377115 BRD1O95696 1058 aa28.1■■■□□ 2.09
FOXA2-201ENST00000377115 TSHZ3Q63HK5 1081 aa28.1■■■□□ 2.09
FOXA2-201ENST00000377115 PREX1Q8TCU6 1659 aa28.1■■■□□ 2.09
FOXA2-201ENST00000377115 PDE1AP54750 535 aa28.09■■■□□ 2.09
FOXA2-201ENST00000377115 NOL8Q76FK4 1167 aaKnown RBP28.09■■■□□ 2.09
FOXA2-201ENST00000377115 MAP7D2Q96T17 732 aa28.09■■■□□ 2.09
FOXA2-201ENST00000377115 AEBP1Q8IUX7 1158 aa28.08■■■□□ 2.09
FOXA2-201ENST00000377115 EDC4Q6P2E9 1401 aaKnown RBP28.08■■■□□ 2.09
FOXA2-201ENST00000377115 ARID3AQ99856 593 aa28.07■■■□□ 2.08
FOXA2-201ENST00000377115 AATKQ6ZMQ8 1374 aa28.07■■■□□ 2.08
FOXA2-201ENST00000377115 PALD1Q9ULE6 856 aa28.07■■■□□ 2.08
FOXA2-201ENST00000377115 FBXO31Q5XUX0 539 aaPredicted RBP28.06■■■□□ 2.08
FOXA2-201ENST00000377115 MCM10Q7L590 875 aa28.06■■■□□ 2.08
FOXA2-201ENST00000377115 TSPY26PQ9H489 355 aa28.06■■■□□ 2.08
FOXA2-201ENST00000377115 FOXD4L6Q3SYB3 417 aaPredicted RBP28.06■■■□□ 2.08
FOXA2-201ENST00000377115 SASS6Q6UVJ0 657 aa28.06■■■□□ 2.08
FOXA2-201ENST00000377115 FOXD4L3Q6VB84 417 aaPredicted RBP28.06■■■□□ 2.08
FOXA2-201ENST00000377115 OSBPL3Q9H4L5 887 aa28.06■■■□□ 2.08
FOXA2-201ENST00000377115 DYNC1I1O14576 645 aa28.05■■■□□ 2.08
FOXA2-201ENST00000377115 NPM1P06748 294 aaKnown RBP eCLIP28.05■■■□□ 2.08
FOXA2-201ENST00000377115 PTPRCP08575 1304 aa28.05■■■□□ 2.08
FOXA2-201ENST00000377115 CHL1O00533 1208 aa28.04■■■□□ 2.08
FOXA2-201ENST00000377115 PTMAP06454 111 aaKnown RBP28.04■■■□□ 2.08
FOXA2-201ENST00000377115 CUL4AQ13619 759 aa28.04■■■□□ 2.08
FOXA2-201ENST00000377115 COG3Q96JB2 828 aa28.04■■■□□ 2.08
FOXA2-201ENST00000377115 ESYT1Q9BSJ8 1104 aa28.03■■■□□ 2.08
FOXA2-201ENST00000377115 GDPD2Q9HCC8 539 aa28.03■■■□□ 2.08
FOXA2-201ENST00000377115 ZBTB7CA1YPR0 619 aa28.02■■■□□ 2.08
FOXA2-201ENST00000377115 HMMRO75330 724 aa28.02■■■□□ 2.08
FOXA2-201ENST00000377115 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.02■■■□□ 2.08
FOXA2-201ENST00000377115 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP28.02■■■□□ 2.08
FOXA2-201ENST00000377115 NCKAP5LQ9HCH0 1330 aa28.02■■■□□ 2.08
FOXA2-201ENST00000377115 CPS1P31327 1500 aa28.02■■■□□ 2.08
FOXA2-201ENST00000377115 SLC4A2P04920 1241 aa28.02■■■□□ 2.08
FOXA2-201ENST00000377115 MCM2P49736 904 aa28.01■■■□□ 2.07
FOXA2-201ENST00000377115 SULT6B1Q6IMI4 303 aa28.01■■■□□ 2.07
FOXA2-201ENST00000377115 SLC4A10Q6U841 1118 aa28.01■■■□□ 2.07
FOXA2-201ENST00000377115 EXOC6BQ9Y2D4 811 aa28.01■■■□□ 2.07
FOXA2-201ENST00000377115 GADD45BO75293 160 aaPredicted RBP28.01■■■□□ 2.07
FOXA2-201ENST00000377115 HAP1P54257 671 aaPredicted RBP28.01■■■□□ 2.07
FOXA2-201ENST00000377115 F6X3S4 739 aa28■■■□□ 2.07
FOXA2-201ENST00000377115 MPNDQ8N594 471 aa28■■■□□ 2.07
FOXA2-201ENST00000377115 STAG3Q9UJ98 1225 aa28■■■□□ 2.07
FOXA2-201ENST00000377115 KIAA2012Q0VF49 1180 aa27.99■■■□□ 2.07
FOXA2-201ENST00000377115 KIAA0232Q92628 1395 aa27.98■■■□□ 2.07
FOXA2-201ENST00000377115 ANO2Q9NQ90 1003 aa27.98■■■□□ 2.07
FOXA2-201ENST00000377115 G2E3Q7L622 706 aa27.98■■■□□ 2.07
FOXA2-201ENST00000377115 SYAP1Q96A49 352 aaPredicted RBP27.97■■■□□ 2.07
FOXA2-201ENST00000377115 UPF3BQ9BZI7 483 aaKnown RBP27.97■■■□□ 2.07
FOXA2-201ENST00000377115 DLC1Q96QB1 1528 aa27.97■■■□□ 2.07
FOXA2-201ENST00000377115 INTS4Q96HW7 963 aaKnown RBP27.97■■■□□ 2.07
FOXA2-201ENST00000377115 MIS18AQ9NYP9 233 aa27.97■■■□□ 2.07
FOXA2-201ENST00000377115 SALL3Q9BXA9 1300 aa27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 147.6 ms