RNA–Protein interactions for RNA: ENST00000376581.9

FARP1-202, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 2 BASIC

Gene FARP1, Length 1,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-202ENST00000376581 WNK3Q9BYP7 1800 aa12.21□□□□□ -0.45
FARP1-202ENST00000376581 RGPD5Q99666 1765 aa12.21□□□□□ -0.45
FARP1-202ENST00000376581 NLRP6P59044 892 aa12.21□□□□□ -0.45
FARP1-202ENST00000376581 PTF1AQ7RTS3 328 aa12.21□□□□□ -0.45
FARP1-202ENST00000376581 MARCH10Q8NA82 808 aaPredicted RBP12.21□□□□□ -0.45
FARP1-202ENST00000376581 AATKQ6ZMQ8 1374 aa12.2□□□□□ -0.46
FARP1-202ENST00000376581 TOPAZ1Q8N9V7 1692 aa12.2□□□□□ -0.46
FARP1-202ENST00000376581 PELP1Q8IZL8 1130 aaKnown RBP12.2□□□□□ -0.46
FARP1-202ENST00000376581 BCL9O00512 1426 aa12.2□□□□□ -0.46
FARP1-202ENST00000376581 BRD4O60885 1362 aaPredicted RBP12.19□□□□□ -0.46
FARP1-202ENST00000376581 CSB-PGBD3P0DP91 1061 aa12.19□□□□□ -0.46
FARP1-202ENST00000376581 SRPK2P78362 688 aaKnown RBP12.19□□□□□ -0.46
FARP1-202ENST00000376581 ASTLQ6HA08 431 aaPredicted RBP12.19□□□□□ -0.46
FARP1-202ENST00000376581 BMP2KQ9NSY1 1161 aaPredicted RBP12.19□□□□□ -0.46
FARP1-202ENST00000376581 WDR17Q8IZU2 1322 aa12.18□□□□□ -0.46
FARP1-202ENST00000376581 ATMINO43313 823 aaPredicted RBP12.18□□□□□ -0.46
FARP1-202ENST00000376581 POLD1P28340 1107 aa12.18□□□□□ -0.46
FARP1-202ENST00000376581 MAP3K5Q99683 1374 aa12.18□□□□□ -0.46
FARP1-202ENST00000376581 TIE1P35590 1138 aa12.17□□□□□ -0.46
FARP1-202ENST00000376581 SLC16A10Q8TF71 515 aa12.17□□□□□ -0.46
FARP1-202ENST00000376581 UTRNP46939 3433 aa12.17□□□□□ -0.46
FARP1-202ENST00000376581 RNF25Q96BH1 459 aaPredicted RBP12.16□□□□□ -0.46
FARP1-202ENST00000376581 CARD10Q9BWT7 1032 aa12.16□□□□□ -0.46
FARP1-202ENST00000376581 PPIP5K1Q6PFW1 1433 aa12.16□□□□□ -0.46
FARP1-202ENST00000376581 COL18A1P39060 1754 aa12.15□□□□□ -0.46
FARP1-202ENST00000376581 GRIN3BO60391 1043 aa12.15□□□□□ -0.46
FARP1-202ENST00000376581 ZNF467Q7Z7K2 595 aaPredicted RBP12.15□□□□□ -0.46
FARP1-202ENST00000376581 KCNH5Q8NCM2 988 aa12.15□□□□□ -0.46
FARP1-202ENST00000376581 TTLL13PA6NNM8 815 aa12.14□□□□□ -0.47
FARP1-202ENST00000376581 ATN1P54259 1190 aaPredicted RBP12.14□□□□□ -0.47
FARP1-202ENST00000376581 AXIN2Q9Y2T1 843 aa12.14□□□□□ -0.47
FARP1-202ENST00000376581 NHSQ6T4R5 1651 aa12.13□□□□□ -0.47
FARP1-202ENST00000376581 ACSBG1Q96GR2 724 aa12.13□□□□□ -0.47
FARP1-202ENST00000376581 BTAF1O14981 1849 aa12.13□□□□□ -0.47
FARP1-202ENST00000376581 CABP2Q9NPB3 220 aa12.12□□□□□ -0.47
FARP1-202ENST00000376581 CABP1Q9NZU7 370 aa12.12□□□□□ -0.47
FARP1-202ENST00000376581 CCDC7Q96M83 1385 aa12.12□□□□□ -0.47
FARP1-202ENST00000376581 SLIT3O75094 1523 aa12.11□□□□□ -0.47
FARP1-202ENST00000376581 QSER1Q2KHR3 1735 aa12.11□□□□□ -0.47
FARP1-202ENST00000376581 KIAA1210Q9ULL0 1709 aa12.11□□□□□ -0.47
FARP1-202ENST00000376581 ECM2O94769 699 aaPredicted RBP12.11□□□□□ -0.47
FARP1-202ENST00000376581 ARHGEF25Q86VW2 580 aa12.11□□□□□ -0.47
FARP1-202ENST00000376581 SOX12O15370 315 aa12.1□□□□□ -0.47
FARP1-202ENST00000376581 GPBP1L1Q9HC44 474 aaPredicted RBP12.1□□□□□ -0.47
FARP1-202ENST00000376581 TFCP2L1Q9NZI6 479 aa12.1□□□□□ -0.47
FARP1-202ENST00000376581 USP6P35125 1406 aa12.1□□□□□ -0.47
FARP1-202ENST00000376581 SHANK3Q9BYB0 1731 aa12.09□□□□□ -0.47
FARP1-202ENST00000376581 SLC27A3Q5K4L6 730 aa12.09□□□□□ -0.47
FARP1-202ENST00000376581 TMEM106CQ9BVX2 250 aa12.09□□□□□ -0.47
FARP1-202ENST00000376581 CPSF1Q10570 1443 aaKnown RBP12.09□□□□□ -0.47
FARP1-202ENST00000376581 QRICH2Q9H0J4 1663 aa12.09□□□□□ -0.47
FARP1-202ENST00000376581 CENPJQ9HC77 1338 aaPredicted RBP12.09□□□□□ -0.47
FARP1-202ENST00000376581 HSPA6P17066 643 aa12.08□□□□□ -0.48
FARP1-202ENST00000376581 COL24A1Q17RW2 1714 aa12.08□□□□□ -0.48
FARP1-202ENST00000376581 PAPPAQ13219 1627 aa12.08□□□□□ -0.48
FARP1-202ENST00000376581 PIK3C2AO00443 1686 aa12.07□□□□□ -0.48
FARP1-202ENST00000376581 IL2RBP14784 551 aa12.07□□□□□ -0.48
FARP1-202ENST00000376581 ZNF827Q17R98 1081 aa12.07□□□□□ -0.48
FARP1-202ENST00000376581 TNS2Q63HR2 1409 aa12.07□□□□□ -0.48
FARP1-202ENST00000376581 NLRP2Q9NX02 1062 aa12.07□□□□□ -0.48
FARP1-202ENST00000376581 TRPM1Q7Z4N2 1603 aa12.07□□□□□ -0.48
FARP1-202ENST00000376581 RGL2O15211 777 aa12.06□□□□□ -0.48
FARP1-202ENST00000376581 PSEN1P49768 467 aa12.06□□□□□ -0.48
FARP1-202ENST00000376581 NLGN2Q8NFZ4 835 aa12.06□□□□□ -0.48
FARP1-202ENST00000376581 LRRC4BQ9NT99 713 aa12.06□□□□□ -0.48
FARP1-202ENST00000376581 RIOK3O14730 519 aaKnown RBP12.05□□□□□ -0.48
FARP1-202ENST00000376581 TTC21BQ7Z4L5 1316 aa12.05□□□□□ -0.48
FARP1-202ENST00000376581 EVC2Q86UK5 1308 aa12.05□□□□□ -0.48
FARP1-202ENST00000376581 TTC21AQ8NDW8 1320 aa12.05□□□□□ -0.48
FARP1-202ENST00000376581 CEP350Q5VT06 3117 aa12.04□□□□□ -0.48
FARP1-202ENST00000376581 HMGB2P26583 209 aaKnown RBP12.04□□□□□ -0.48
FARP1-202ENST00000376581 PDAP1Q13442 181 aaKnown RBP12.04□□□□□ -0.48
FARP1-202ENST00000376581 NBPF1Q3BBV0 1214 aa12.04□□□□□ -0.48
FARP1-202ENST00000376581 ABCC6O95255 1503 aa12.04□□□□□ -0.48
FARP1-202ENST00000376581 PNPLA7Q6ZV29 1317 aa12.04□□□□□ -0.48
FARP1-202ENST00000376581 TUBGCP6Q96RT7 1819 aa12.04□□□□□ -0.48
FARP1-202ENST00000376581 RAB3GAP2Q9H2M9 1393 aa12.04□□□□□ -0.48
FARP1-202ENST00000376581 ATP10DQ9P241 1426 aa12.03□□□□□ -0.48
FARP1-202ENST00000376581 LTN1O94822 1766 aa12.03□□□□□ -0.48
FARP1-202ENST00000376581 YBX3P16989 372 aaKnown RBP eCLIP12.03□□□□□ -0.48
FARP1-202ENST00000376581 SYTL4Q96C24 671 aaPredicted RBP12.03□□□□□ -0.48
FARP1-202ENST00000376581 TRIM35Q9UPQ4 493 aa12.03□□□□□ -0.48
FARP1-202ENST00000376581 DDX54Q8TDD1 881 aaKnown RBP12.02□□□□□ -0.49
FARP1-202ENST00000376581 ZNF526Q8TF50 670 aaPredicted RBP12.02□□□□□ -0.49
FARP1-202ENST00000376581 CD2APQ9Y5K6 639 aa12□□□□□ -0.49
FARP1-202ENST00000376581 ERBB3P21860 1342 aa12□□□□□ -0.49
FARP1-202ENST00000376581 LY75O60449 1722 aa12□□□□□ -0.49
FARP1-202ENST00000376581 GOLGB1Q14789 3259 aaKnown RBP11.99□□□□□ -0.49
FARP1-202ENST00000376581 KCNQ4P56696 695 aa11.99□□□□□ -0.49
FARP1-202ENST00000376581 ANKRD24Q8TF21 1146 aa11.99□□□□□ -0.49
FARP1-202ENST00000376581 SLC39A7Q92504 469 aa11.99□□□□□ -0.49
FARP1-202ENST00000376581 KTN1Q86UP2 1357 aaKnown RBP11.99□□□□□ -0.49
FARP1-202ENST00000376581 POTEFA5A3E0 1075 aa11.98□□□□□ -0.49
FARP1-202ENST00000376581 C7P10643 843 aa11.98□□□□□ -0.49
FARP1-202ENST00000376581 PRIM1P49642 420 aaKnown RBP11.98□□□□□ -0.49
FARP1-202ENST00000376581 APLP1P51693 650 aa11.98□□□□□ -0.49
FARP1-202ENST00000376581 CCNL1Q9UK58 526 aaPredicted RBP11.98□□□□□ -0.49
FARP1-202ENST00000376581 NFAT5O94916 1531 aa11.97□□□□□ -0.49
FARP1-202ENST00000376581 COL23A1Q86Y22 540 aaPredicted RBP11.97□□□□□ -0.49
FARP1-202ENST00000376581 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.97□□□□□ -0.499e-10■■□□□ 13.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms