RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 API5Q9BZZ5 524 aaKnown RBP10.37□□□□□ -0.75
UBR4-202ENST00000375224 RTL1A6NKG5 1358 aa10.37□□□□□ -0.75
UBR4-202ENST00000375224 IGSF1Q8N6C5 1336 aa10.37□□□□□ -0.75
UBR4-202ENST00000375224 HTATSF1O43719 755 aaKnown RBP10.37□□□□□ -0.75
UBR4-202ENST00000375224 RTF1Q92541 710 aaKnown RBP10.37□□□□□ -0.75
UBR4-202ENST00000375224 KIAA0232Q92628 1395 aa10.37□□□□□ -0.75
UBR4-202ENST00000375224 PAK3O75914 559 aaPredicted RBP10.37□□□□□ -0.75
UBR4-202ENST00000375224 FAM83GA6ND36 823 aa10.36□□□□□ -0.75
UBR4-202ENST00000375224 CHL1O00533 1208 aa10.36□□□□□ -0.75
UBR4-202ENST00000375224 ZBTB40Q9NUA8 1239 aa10.36□□□□□ -0.75
UBR4-202ENST00000375224 BRPF3Q9ULD4 1205 aa10.36□□□□□ -0.75
UBR4-202ENST00000375224 PDZRN3Q9UPQ7 1066 aa10.36□□□□□ -0.75
UBR4-202ENST00000375224 VIRMAQ69YN4 1812 aaKnown RBP10.36□□□□□ -0.75
UBR4-202ENST00000375224 TSPYL6Q8N831 410 aa10.35□□□□□ -0.75
UBR4-202ENST00000375224 HOXC9P31274 260 aa10.35□□□□□ -0.75
UBR4-202ENST00000375224 EYA1Q99502 592 aa10.35□□□□□ -0.75
UBR4-202ENST00000375224 PSME1Q06323 249 aa10.35□□□□□ -0.75
UBR4-202ENST00000375224 DCTN1Q14203 1278 aa10.35□□□□□ -0.75
UBR4-202ENST00000375224 C14orf37Q86TY3 774 aa10.35□□□□□ -0.75
UBR4-202ENST00000375224 C8orf58Q8NAV2 365 aa10.35□□□□□ -0.75
UBR4-202ENST00000375224 KCNH5Q8NCM2 988 aa10.35□□□□□ -0.75
UBR4-202ENST00000375224 MARF1Q9Y4F3 1742 aaKnown RBP10.35□□□□□ -0.75
UBR4-202ENST00000375224 NWD1Q149M9 1564 aa10.35□□□□□ -0.75
UBR4-202ENST00000375224 AEBP2Q6ZN18 517 aaPredicted RBP10.34□□□□□ -0.75
UBR4-202ENST00000375224 ELL2O00472 640 aaPredicted RBP10.34□□□□□ -0.75
UBR4-202ENST00000375224 ESCO1Q5FWF5 840 aa10.34□□□□□ -0.75
UBR4-202ENST00000375224 ABCC4O15439 1325 aa10.33□□□□□ -0.76
UBR4-202ENST00000375224 SMC5Q8IY18 1101 aa10.33□□□□□ -0.76
UBR4-202ENST00000375224 USP35Q9P2H5 1018 aa10.33□□□□□ -0.76
UBR4-202ENST00000375224 MTHFSDQ2M296 383 aaKnown RBP10.33□□□□□ -0.76
UBR4-202ENST00000375224 MCM10Q7L590 875 aa10.33□□□□□ -0.76
UBR4-202ENST00000375224 CRB1P82279 1406 aa10.33□□□□□ -0.76
UBR4-202ENST00000375224 ZBTB7BO15156 539 aaPredicted RBP10.32□□□□□ -0.76
UBR4-202ENST00000375224 NUTM2GQ5VZR2 741 aa10.32□□□□□ -0.76
UBR4-202ENST00000375224 IP6K1Q92551 441 aa10.32□□□□□ -0.76
UBR4-202ENST00000375224 HSP90AA1P07900 732 aaKnown RBP10.32□□□□□ -0.76
UBR4-202ENST00000375224 BABAM1Q9NWV8 329 aa10.32□□□□□ -0.76
UBR4-202ENST00000375224 PTPRCP08575 1304 aa10.31□□□□□ -0.76
UBR4-202ENST00000375224 SOS1Q07889 1333 aaPredicted RBP10.31□□□□□ -0.76
UBR4-202ENST00000375224 GNAT3A8MTJ3 354 aa10.31□□□□□ -0.76
UBR4-202ENST00000375224 RRP9O43818 475 aaKnown RBP10.31□□□□□ -0.76
UBR4-202ENST00000375224 UPF2Q9HAU5 1272 aaKnown RBP10.31□□□□□ -0.76
UBR4-202ENST00000375224 LTN1O94822 1766 aa10.31□□□□□ -0.76
UBR4-202ENST00000375224 PROSER2Q86WR7 435 aaPredicted RBP10.31□□□□□ -0.76
UBR4-202ENST00000375224 GCC1Q96CN9 775 aa10.31□□□□□ -0.76
UBR4-202ENST00000375224 TSPYL4Q9UJ04 414 aa10.31□□□□□ -0.76
UBR4-202ENST00000375224 PHRF1Q9P1Y6 1649 aaKnown RBP10.3□□□□□ -0.76
UBR4-202ENST00000375224 NFAT5O94916 1531 aa10.29□□□□□ -0.76
UBR4-202ENST00000375224 KIF1AQ12756 1690 aa10.29□□□□□ -0.76
UBR4-202ENST00000375224 INTS3Q68E01 1043 aaKnown RBP10.29□□□□□ -0.76
UBR4-202ENST00000375224 MAP3K5Q99683 1374 aa10.29□□□□□ -0.76
UBR4-202ENST00000375224 C19orf44Q9H6X5 657 aa10.29□□□□□ -0.76
UBR4-202ENST00000375224 FOXO3O43524 673 aa10.28□□□□□ -0.76
UBR4-202ENST00000375224 FAM43AQ8N2R8 423 aa10.28□□□□□ -0.76
UBR4-202ENST00000375224 ARXQ96QS3 562 aa10.28□□□□□ -0.76
UBR4-202ENST00000375224 NUCB1Q02818 461 aa10.28□□□□□ -0.76
UBR4-202ENST00000375224 RBM33Q96EV2 1170 aaKnown RBP10.28□□□□□ -0.76
UBR4-202ENST00000375224 CHMP4AQ9BY43 222 aa10.28□□□□□ -0.76
UBR4-202ENST00000375224 LRRC37A3O60309 1634 aa10.28□□□□□ -0.76
UBR4-202ENST00000375224 LTV1Q96GA3 475 aaPredicted RBP10.28□□□□□ -0.76
UBR4-202ENST00000375224 NCOA3Q9Y6Q9 1424 aa10.28□□□□□ -0.76
UBR4-202ENST00000375224 NAP1L5Q96NT1 182 aaPredicted RBP10.27□□□□□ -0.77
UBR4-202ENST00000375224 SLIT3O75094 1523 aa10.27□□□□□ -0.77
UBR4-202ENST00000375224 TAF7Q15545 349 aaPredicted RBP10.27□□□□□ -0.77
UBR4-202ENST00000375224 CHD1LQ86WJ1 897 aa10.27□□□□□ -0.77
UBR4-202ENST00000375224 STK31Q9BXU1 1019 aa10.27□□□□□ -0.77
UBR4-202ENST00000375224 ORAI2Q96SN7 254 aa10.26□□□□□ -0.77
UBR4-202ENST00000375224 SLC4A2P04920 1241 aa10.26□□□□□ -0.77
UBR4-202ENST00000375224 CACNA1FO60840 1977 aa10.26□□□□□ -0.77
UBR4-202ENST00000375224 GCP02774 474 aa10.26□□□□□ -0.77
UBR4-202ENST00000375224 CCDC30Q5VVM6 783 aa10.26□□□□□ -0.77
UBR4-202ENST00000375224 KRT28Q7Z3Y7 464 aa10.26□□□□□ -0.77
UBR4-202ENST00000375224 C1orf167Q5SNV9 1468 aa10.25□□□□□ -0.77
UBR4-202ENST00000375224 DCCP43146 1447 aa10.25□□□□□ -0.77
UBR4-202ENST00000375224 MST1RQ04912 1400 aa10.25□□□□□ -0.77
UBR4-202ENST00000375224 KRT24Q2M2I5 525 aa10.25□□□□□ -0.77
UBR4-202ENST00000375224 RPAP2Q8IXW5 612 aaPredicted RBP10.25□□□□□ -0.77
UBR4-202ENST00000375224 ATF3P18847 181 aa10.25□□□□□ -0.77
UBR4-202ENST00000375224 CCT4P50991 539 aaKnown RBP10.25□□□□□ -0.77
UBR4-202ENST00000375224 AMOTQ4VCS5 1084 aa10.25□□□□□ -0.77
UBR4-202ENST00000375224 ARHGEF25Q86VW2 580 aa10.25□□□□□ -0.77
UBR4-202ENST00000375224 USP19O94966 1318 aa10.25□□□□□ -0.77
UBR4-202ENST00000375224 MSH6P52701 1360 aa10.24□□□□□ -0.77
UBR4-202ENST00000375224 BECN1Q14457 450 aa10.24□□□□□ -0.77
UBR4-202ENST00000375224 PLEKHO1Q53GL0 409 aaPredicted RBP10.24□□□□□ -0.77
UBR4-202ENST00000375224 MIS18AQ9NYP9 233 aa10.24□□□□□ -0.77
UBR4-202ENST00000375224 TRPM3Q9HCF6 1732 aaPredicted RBP10.24□□□□□ -0.77
UBR4-202ENST00000375224 GSE1Q14687 1217 aa10.24□□□□□ -0.77
UBR4-202ENST00000375224 RGS12O14924 1447 aa10.24□□□□□ -0.77
UBR4-202ENST00000375224 ANKRD45Q5TZF3 282 aa10.24□□□□□ -0.77
UBR4-202ENST00000375224 IL17REQ8NFR9 667 aa10.24□□□□□ -0.77
UBR4-202ENST00000375224 NBPF6Q5VWK0 638 aa10.23□□□□□ -0.77
UBR4-202ENST00000375224 NBPF4Q96M43 638 aa10.23□□□□□ -0.77
UBR4-202ENST00000375224 ZBTB7CA1YPR0 619 aa10.23□□□□□ -0.77
UBR4-202ENST00000375224 LMOD2Q6P5Q4 547 aa10.23□□□□□ -0.77
UBR4-202ENST00000375224 ANKRD44Q8N8A2 993 aa10.23□□□□□ -0.77
UBR4-202ENST00000375224 LNPKQ9C0E8 428 aa10.23□□□□□ -0.77
UBR4-202ENST00000375224 C1orf115Q9H7X2 142 aa10.23□□□□□ -0.77
UBR4-202ENST00000375224 AKAP4Q5JQC9 854 aa10.23□□□□□ -0.77
UBR4-202ENST00000375224 CEMIPQ8WUJ3 1361 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms