RNA–Protein interactions for RNA: ENST00000374688.5

TMEM38B-201, Transcript of transmembrane protein 38B, humanhuman

TSL 2 BASIC

Gene TMEM38B, Length 3,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38B-201ENST00000374688 BECN1Q14457 450 aa4.8□□□□□ -1.64
TMEM38B-201ENST00000374688 E2F5Q15329 346 aa4.8□□□□□ -1.64
TMEM38B-201ENST00000374688 NUTM2GQ5VZR2 741 aa4.8□□□□□ -1.64
TMEM38B-201ENST00000374688 RSPH1Q8WYR4 309 aa4.8□□□□□ -1.64
TMEM38B-201ENST00000374688 CALCOCO1Q9P1Z2 691 aa4.8□□□□□ -1.64
TMEM38B-201ENST00000374688 SWAP70Q9UH65 585 aa4.8□□□□□ -1.64
TMEM38B-201ENST00000374688 SBNO2Q9Y2G9 1366 aa4.79□□□□□ -1.64
TMEM38B-201ENST00000374688 DYTNA2CJ06 578 aa4.79□□□□□ -1.64
TMEM38B-201ENST00000374688 CCDC70Q6NSX1 233 aa4.79□□□□□ -1.64
TMEM38B-201ENST00000374688 RPS6KC1Q96S38 1066 aa4.79□□□□□ -1.64
TMEM38B-201ENST00000374688 HOXA2O43364 376 aa4.79□□□□□ -1.64
TMEM38B-201ENST00000374688 IBSPP21815 317 aaPredicted RBP4.79□□□□□ -1.64
TMEM38B-201ENST00000374688 CT47A1Q5JQC4 288 aaPredicted RBP4.79□□□□□ -1.64
TMEM38B-201ENST00000374688 NAP1L4Q99733 375 aaKnown RBP4.79□□□□□ -1.64
TMEM38B-201ENST00000374688 ARPC5LQ9BPX5 153 aa4.79□□□□□ -1.64
TMEM38B-201ENST00000374688 RANBP17Q9H2T7 1088 aaKnown RBP4.79□□□□□ -1.64
TMEM38B-201ENST00000374688 UPF2Q9HAU5 1272 aaKnown RBP4.79□□□□□ -1.64
TMEM38B-201ENST00000374688 TRIM35Q9UPQ4 493 aa4.79□□□□□ -1.64
TMEM38B-201ENST00000374688 TMA7Q9Y2S6 64 aaKnown RBP4.79□□□□□ -1.64
TMEM38B-201ENST00000374688 CHMP3Q9Y3E7 222 aa4.79□□□□□ -1.64
TMEM38B-201ENST00000374688 H0YHG0 523 aa4.79□□□□□ -1.64
TMEM38B-201ENST00000374688 CBFA2T2O43439 604 aa4.79□□□□□ -1.64
TMEM38B-201ENST00000374688 SARNPP82979 210 aaKnown RBP4.79□□□□□ -1.64
TMEM38B-201ENST00000374688 C4orf46Q504U0 113 aa4.79□□□□□ -1.64
TMEM38B-201ENST00000374688 PROSER2Q86WR7 435 aaPredicted RBP4.79□□□□□ -1.64
TMEM38B-201ENST00000374688 SKAP1Q86WV1 359 aa4.79□□□□□ -1.64
TMEM38B-201ENST00000374688 KRI1Q8N9T8 703 aaKnown RBP4.79□□□□□ -1.64
TMEM38B-201ENST00000374688 PNISRQ8TF01 805 aaKnown RBP4.79□□□□□ -1.64
TMEM38B-201ENST00000374688 NEUROD6Q96NK8 337 aa4.79□□□□□ -1.64
TMEM38B-201ENST00000374688 NCAPGQ9BPX3 1015 aa4.79□□□□□ -1.64
TMEM38B-201ENST00000374688 BACH2Q9BYV9 841 aa4.79□□□□□ -1.64
TMEM38B-201ENST00000374688 C22orf23Q9BZE7 217 aa4.79□□□□□ -1.64
TMEM38B-201ENST00000374688 IQSEC3Q9UPP2 1182 aaPredicted RBP4.79□□□□□ -1.64
TMEM38B-201ENST00000374688 ATICP31939 592 aa4.78□□□□□ -1.64
TMEM38B-201ENST00000374688 PEX19P40855 299 aa4.78□□□□□ -1.64
TMEM38B-201ENST00000374688 USP5P45974 858 aa4.78□□□□□ -1.64
TMEM38B-201ENST00000374688 CCDC92Q53HC0 331 aaPredicted RBP4.78□□□□□ -1.64
TMEM38B-201ENST00000374688 SND1Q7KZF4 910 aaKnown RBP eCLIP4.78□□□□□ -1.641e-7■■□□□ 11.5
TMEM38B-201ENST00000374688 CFAP69A5D8W1 941 aa4.78□□□□□ -1.64
TMEM38B-201ENST00000374688 KIF1CO43896 1103 aaKnown RBP4.78□□□□□ -1.64
TMEM38B-201ENST00000374688 SF3B2Q13435 895 aaKnown RBP4.78□□□□□ -1.64
TMEM38B-201ENST00000374688 NAALADL2Q58DX5 795 aa4.78□□□□□ -1.64
TMEM38B-201ENST00000374688 CTR9Q6PD62 1173 aa4.78□□□□□ -1.64
TMEM38B-201ENST00000374688 ZSCAN30Q86W11 494 aa4.78□□□□□ -1.64
TMEM38B-201ENST00000374688 SNRNP27Q8WVK2 155 aaKnown RBP4.78□□□□□ -1.64
TMEM38B-201ENST00000374688 CDC5LQ99459 802 aaKnown RBP4.78□□□□□ -1.64
TMEM38B-201ENST00000374688 ZHX3Q9H4I2 956 aa4.78□□□□□ -1.64
TMEM38B-201ENST00000374688 RMI1Q9H9A7 625 aa4.78□□□□□ -1.64
TMEM38B-201ENST00000374688 KIF5CO60282 957 aa4.78□□□□□ -1.64
TMEM38B-201ENST00000374688 NBPF7P0C2Y1 421 aaPredicted RBP4.78□□□□□ -1.64
TMEM38B-201ENST00000374688 NEFHP12036 1026 aa4.78□□□□□ -1.64
TMEM38B-201ENST00000374688 TTC30AQ86WT1 665 aa4.78□□□□□ -1.64
TMEM38B-201ENST00000374688 VPS37AQ8NEZ2 397 aa4.78□□□□□ -1.64
TMEM38B-201ENST00000374688 SLC4A5Q9BY07 1137 aa4.78□□□□□ -1.64
TMEM38B-201ENST00000374688 CHCHD3Q9NX63 227 aaKnown RBP4.78□□□□□ -1.64
TMEM38B-201ENST00000374688 KLF15Q9UIH9 416 aa4.78□□□□□ -1.64
TMEM38B-201ENST00000374688 TMCO5BA8MYB1 307 aa4.77□□□□□ -1.65
TMEM38B-201ENST00000374688 MLECQ14165 292 aa4.77□□□□□ -1.65
TMEM38B-201ENST00000374688 SKIV2LQ15477 1246 aaKnown RBP4.77□□□□□ -1.65
TMEM38B-201ENST00000374688 ENOX2Q16206 610 aaKnown RBP4.77□□□□□ -1.65
TMEM38B-201ENST00000374688 PTPROQ16827 1216 aa4.77□□□□□ -1.65
TMEM38B-201ENST00000374688 DDX27Q96GQ7 796 aaKnown RBP4.77□□□□□ -1.65
TMEM38B-201ENST00000374688 ERBB4Q15303 1308 aa4.77□□□□□ -1.65
TMEM38B-201ENST00000374688 COQ9O75208 318 aa4.77□□□□□ -1.65
TMEM38B-201ENST00000374688 C1QTNF12Q5T7M4 302 aa4.77□□□□□ -1.65
TMEM38B-201ENST00000374688 BORCS6Q96GS4 357 aa4.77□□□□□ -1.65
TMEM38B-201ENST00000374688 INO80BQ9C086 356 aaPredicted RBP4.77□□□□□ -1.65
TMEM38B-201ENST00000374688 GOPCQ9HD26 462 aa4.77□□□□□ -1.65
TMEM38B-201ENST00000374688 PPFIA3O75145 1194 aa4.77□□□□□ -1.65
TMEM38B-201ENST00000374688 ZC3H12AQ5D1E8 599 aaKnown RBP4.77□□□□□ -1.65
TMEM38B-201ENST00000374688 ERCC4Q92889 916 aaPredicted RBP4.77□□□□□ -1.65
TMEM38B-201ENST00000374688 CEP89Q96ST8 783 aa4.77□□□□□ -1.65
TMEM38B-201ENST00000374688 TCEAL9Q9UHQ7 104 aa4.77□□□□□ -1.65
TMEM38B-201ENST00000374688 PRR12Q9ULL5 1215 aa4.77□□□□□ -1.65
TMEM38B-201ENST00000374688 NAT2P11245 290 aa4.76□□□□□ -1.65
TMEM38B-201ENST00000374688 HDLBPQ00341 1268 aaKnown RBP4.76□□□□□ -1.65
TMEM38B-201ENST00000374688 ENOX1Q8TC92 643 aaKnown RBP4.76□□□□□ -1.65
TMEM38B-201ENST00000374688 GRPEL1Q9HAV7 217 aa4.76□□□□□ -1.65
TMEM38B-201ENST00000374688 KNSTRNQ9Y448 316 aa4.76□□□□□ -1.65
TMEM38B-201ENST00000374688 ABL2P42684 1182 aa4.76□□□□□ -1.65
TMEM38B-201ENST00000374688 CDC37Q16543 378 aaPredicted RBP4.76□□□□□ -1.65
TMEM38B-201ENST00000374688 FAM161AQ3B820 660 aa4.76□□□□□ -1.65
TMEM38B-201ENST00000374688 SASS6Q6UVJ0 657 aa4.76□□□□□ -1.65
TMEM38B-201ENST00000374688 TMEM92Q6UXU6 159 aa4.76□□□□□ -1.65
TMEM38B-201ENST00000374688 LCA5Q86VQ0 697 aa4.76□□□□□ -1.65
TMEM38B-201ENST00000374688 SFMBT1Q9UHJ3 866 aa4.76□□□□□ -1.65
TMEM38B-201ENST00000374688 RABL2BQ9UNT1 228 aa4.76□□□□□ -1.65
TMEM38B-201ENST00000374688 DDX49Q9Y6V7 483 aaKnown RBP4.76□□□□□ -1.65
TMEM38B-201ENST00000374688 KCNA2P16389 499 aa4.76□□□□□ -1.65
TMEM38B-201ENST00000374688 ZC3H6P61129 1189 aaKnown RBP4.76□□□□□ -1.65
TMEM38B-201ENST00000374688 PPP1R15BQ5SWA1 713 aa4.76□□□□□ -1.65
TMEM38B-201ENST00000374688 TAX1BP1Q86VP1 789 aa4.76□□□□□ -1.65
TMEM38B-201ENST00000374688 AGBL1Q96MI9 1066 aa4.76□□□□□ -1.65
TMEM38B-201ENST00000374688 SIN3AQ96ST3 1273 aa4.76□□□□□ -1.65
TMEM38B-201ENST00000374688 MPHOSPH6Q99547 160 aaKnown RBP4.76□□□□□ -1.65
TMEM38B-201ENST00000374688 VDRP11473 427 aa4.75□□□□□ -1.65
TMEM38B-201ENST00000374688 SAFB2Q14151 953 aaKnown RBP eCLIP4.75□□□□□ -1.65
TMEM38B-201ENST00000374688 HSP90B2PQ58FF3 399 aa4.75□□□□□ -1.65
TMEM38B-201ENST00000374688 POM121Q96HA1 1249 aa4.75□□□□□ -1.65
TMEM38B-201ENST00000374688 USP25Q9UHP3 1055 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms