RNA–Protein interactions for RNA: ENST00000374379.8

CLIC4-201, Transcript of chloride intracellular channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC4, Length 4,346 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-201ENST00000374379 SPHKAPQ2M3C7 1700 aa16.55■□□□□ 0.24
CLIC4-201ENST00000374379 NUCB1Q02818 461 aa16.54■□□□□ 0.24
CLIC4-201ENST00000374379 HECW2Q9P2P5 1572 aa16.54■□□□□ 0.24
CLIC4-201ENST00000374379 MADDQ8WXG6 1647 aa16.54■□□□□ 0.24
CLIC4-201ENST00000374379 HSP90B1P14625 803 aaKnown RBP16.54■□□□□ 0.24
CLIC4-201ENST00000374379 G2E3Q7L622 706 aa16.54■□□□□ 0.24
CLIC4-201ENST00000374379 RBM42Q9BTD8 480 aaKnown RBP16.54■□□□□ 0.24
CLIC4-201ENST00000374379 DNTTIP2Q5QJE6 756 aaKnown RBP16.54■□□□□ 0.24
CLIC4-201ENST00000374379 MAP3K4Q9Y6R4 1608 aa16.54■□□□□ 0.24
CLIC4-201ENST00000374379 RNF17Q9BXT8 1623 aaKnown RBP16.53■□□□□ 0.24
CLIC4-201ENST00000374379 CHRNA2Q15822 529 aa16.53■□□□□ 0.24
CLIC4-201ENST00000374379 NEUROD6Q96NK8 337 aa16.53■□□□□ 0.24
CLIC4-201ENST00000374379 TATP17735 454 aaPredicted RBP16.52■□□□□ 0.24
CLIC4-201ENST00000374379 INSRP06213 1382 aa16.52■□□□□ 0.24
CLIC4-201ENST00000374379 UPF3BQ9BZI7 483 aaKnown RBP16.52■□□□□ 0.23
CLIC4-201ENST00000374379 SHROOM2Q13796 1616 aa16.52■□□□□ 0.23
CLIC4-201ENST00000374379 ZBTB7BO15156 539 aaPredicted RBP16.51■□□□□ 0.23
CLIC4-201ENST00000374379 K7ELQ4 463 aaPredicted RBP16.51■□□□□ 0.23
CLIC4-201ENST00000374379 ERC2O15083 957 aa16.51■□□□□ 0.23
CLIC4-201ENST00000374379 JARID2Q92833 1246 aaPredicted RBP16.51■□□□□ 0.23
CLIC4-201ENST00000374379 TOM1L2Q6ZVM7 507 aa16.51■□□□□ 0.23
CLIC4-201ENST00000374379 CABLES1Q8TDN4 633 aa16.51■□□□□ 0.23
CLIC4-201ENST00000374379 PI4KAP2A4QPH2 592 aa16.5■□□□□ 0.23
CLIC4-201ENST00000374379 SMC5Q8IY18 1101 aa16.5■□□□□ 0.23
CLIC4-201ENST00000374379 PI4KAP1Q8N8J0 262 aa16.5■□□□□ 0.23
CLIC4-201ENST00000374379 MCM4P33991 863 aa16.5■□□□□ 0.23
CLIC4-201ENST00000374379 KCNH5Q8NCM2 988 aa16.5■□□□□ 0.23
CLIC4-201ENST00000374379 OTUD7AQ8TE49 926 aaPredicted RBP16.5■□□□□ 0.23
CLIC4-201ENST00000374379 PRDM11Q9NQV5 511 aa16.5■□□□□ 0.23
CLIC4-201ENST00000374379 EDC4Q6P2E9 1401 aaKnown RBP16.5■□□□□ 0.23
CLIC4-201ENST00000374379 PRR36Q9H6K5 1346 aa16.5■□□□□ 0.23
CLIC4-201ENST00000374379 TMEM2Q9UHN6 1383 aa16.49■□□□□ 0.23
CLIC4-201ENST00000374379 PIP4K2AP48426 406 aaPredicted RBP16.49■□□□□ 0.23
CLIC4-201ENST00000374379 BMP2KLQ5H9B9 411 aa16.49■□□□□ 0.23
CLIC4-201ENST00000374379 ZFYVE9O95405 1425 aa16.49■□□□□ 0.23
CLIC4-201ENST00000374379 PTCD1O75127 700 aaKnown RBP16.49■□□□□ 0.23
CLIC4-201ENST00000374379 KRT28Q7Z3Y7 464 aa16.49■□□□□ 0.23
CLIC4-201ENST00000374379 ARHGAP45Q92619 1136 aa16.49■□□□□ 0.23
CLIC4-201ENST00000374379 CEP152O94986 1710 aa16.49■□□□□ 0.23
CLIC4-201ENST00000374379 RABEP1Q15276 862 aa16.49■□□□□ 0.23
CLIC4-201ENST00000374379 ARAP3Q8WWN8 1544 aa16.49■□□□□ 0.23
CLIC4-201ENST00000374379 CWC27Q6UX04 472 aaKnown RBP16.49■□□□□ 0.23
CLIC4-201ENST00000374379 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.48■□□□□ 0.23
CLIC4-201ENST00000374379 ORAI2Q96SN7 254 aa16.48■□□□□ 0.23
CLIC4-201ENST00000374379 ABCA6Q8N139 1617 aa16.48■□□□□ 0.23
CLIC4-201ENST00000374379 FAM177BA6PVY3 158 aa16.48■□□□□ 0.23
CLIC4-201ENST00000374379 HSP90AB4PQ58FF6 505 aa16.48■□□□□ 0.23
CLIC4-201ENST00000374379 CCDC85AQ96PX6 553 aaPredicted RBP16.48■□□□□ 0.23
CLIC4-201ENST00000374379 LARP6Q9BRS8 491 aaKnown RBP16.48■□□□□ 0.23
CLIC4-201ENST00000374379 SLC39A6Q13433 755 aa16.48■□□□□ 0.23
CLIC4-201ENST00000374379 MX1P20591 662 aa16.47■□□□□ 0.23
CLIC4-201ENST00000374379 FOSBP53539 338 aa16.47■□□□□ 0.23
CLIC4-201ENST00000374379 RUFY2Q8WXA3 655 aa16.47■□□□□ 0.23
CLIC4-201ENST00000374379 TBX22Q9Y458 520 aa16.47■□□□□ 0.23
CLIC4-201ENST00000374379 VPS37CA5D8V6 355 aaPredicted RBP16.47■□□□□ 0.23
CLIC4-201ENST00000374379 ZKSCAN1P17029 563 aaPredicted RBP16.47■□□□□ 0.23
CLIC4-201ENST00000374379 CABP4P57796 275 aa16.47■□□□□ 0.23
CLIC4-201ENST00000374379 FSD1Q9BTV5 496 aa16.47■□□□□ 0.23
CLIC4-201ENST00000374379 ABCA9Q8IUA7 1624 aa16.47■□□□□ 0.23
CLIC4-201ENST00000374379 DNAJC2Q99543 621 aaKnown RBP16.47■□□□□ 0.23
CLIC4-201ENST00000374379 CHPF2Q9P2E5 772 aa16.47■□□□□ 0.23
CLIC4-201ENST00000374379 TTC21AQ8NDW8 1320 aa16.47■□□□□ 0.23
CLIC4-201ENST00000374379 CNTROBQ8N137 903 aa16.46■□□□□ 0.23
CLIC4-201ENST00000374379 ANKRD24Q8TF21 1146 aa16.46■□□□□ 0.23
CLIC4-201ENST00000374379 FLT4P35916 1363 aa16.46■□□□□ 0.23
CLIC4-201ENST00000374379 PTPRCP08575 1304 aa16.46■□□□□ 0.23
CLIC4-201ENST00000374379 MSNP26038 577 aaKnown RBP16.46■□□□□ 0.23
CLIC4-201ENST00000374379 ZRSR1Q15695 479 aaKnown RBP16.46■□□□□ 0.23
CLIC4-201ENST00000374379 PHAXQ9H814 394 aaKnown RBP16.46■□□□□ 0.23
CLIC4-201ENST00000374379 ROBO2Q9HCK4 1378 aa16.46■□□□□ 0.23
CLIC4-201ENST00000374379 PRPF40AO75400 957 aaKnown RBP16.46■□□□□ 0.23
CLIC4-201ENST00000374379 HOXC9P31274 260 aa16.46■□□□□ 0.23
CLIC4-201ENST00000374379 CAVIN1Q6NZI2 390 aaKnown RBP16.46■□□□□ 0.22
CLIC4-201ENST00000374379 AACSQ86V21 672 aa16.46■□□□□ 0.22
CLIC4-201ENST00000374379 SDSP20132 328 aa16.45■□□□□ 0.22
CLIC4-201ENST00000374379 NUCB2P80303 420 aa16.45■□□□□ 0.22
CLIC4-201ENST00000374379 ANKRD44Q8N8A2 993 aa16.45■□□□□ 0.22
CLIC4-201ENST00000374379 DNAAF4Q8WXU2 420 aa16.45■□□□□ 0.22
CLIC4-201ENST00000374379 KAT6BQ8WYB5 2073 aa16.45■□□□□ 0.22
CLIC4-201ENST00000374379 PPP1R42Q7Z4L9 355 aa16.45■□□□□ 0.22
CLIC4-201ENST00000374379 PPRC1Q5VV67 1664 aaKnown RBP16.45■□□□□ 0.22
CLIC4-201ENST00000374379 PTMSP20962 102 aa16.44■□□□□ 0.22
CLIC4-201ENST00000374379 RNF214Q8ND24 703 aa16.44■□□□□ 0.22
CLIC4-201ENST00000374379 DDX17Q92841 729 aaKnown RBP16.44■□□□□ 0.22
CLIC4-201ENST00000374379 CEP85Q6P2H3 762 aa16.44■□□□□ 0.22
CLIC4-201ENST00000374379 HSPA2P54652 639 aa16.43■□□□□ 0.22
CLIC4-201ENST00000374379 TTC22Q5TAA0 569 aa16.43■□□□□ 0.22
CLIC4-201ENST00000374379 CHL1O00533 1208 aa16.43■□□□□ 0.22
CLIC4-201ENST00000374379 LGR6Q9HBX8 967 aa16.43■□□□□ 0.22
CLIC4-201ENST00000374379 CFAP74Q9C0B2 1584 aa16.42■□□□□ 0.22
CLIC4-201ENST00000374379 SKOR2Q2VWA4 1001 aaPredicted RBP16.42■□□□□ 0.22
CLIC4-201ENST00000374379 CCDC8Q9H0W5 538 aaPredicted RBP16.42■□□□□ 0.22
CLIC4-201ENST00000374379 TOMM22Q9NS69 142 aa16.42■□□□□ 0.22
CLIC4-201ENST00000374379 SSFA2P28290 1259 aa16.42■□□□□ 0.22
CLIC4-201ENST00000374379 SMC3Q9UQE7 1217 aa16.42■□□□□ 0.22
CLIC4-201ENST00000374379 MAP3K2Q9Y2U5 619 aa16.42■□□□□ 0.22
CLIC4-201ENST00000374379 SPG7Q9UQ90 795 aa16.42■□□□□ 0.22
CLIC4-201ENST00000374379 GCP02774 474 aa16.41■□□□□ 0.22
CLIC4-201ENST00000374379 MSH6P52701 1360 aa16.41■□□□□ 0.22
CLIC4-201ENST00000374379 PLEKHG3A1L390 1219 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms