RNA–Protein interactions for RNA: ENST00000373993.5

A1CF-202, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene A1CF, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-202ENST00000373993 SEPT12Q8IYM1 358 aa17.99■□□□□ 0.47
A1CF-202ENST00000373993 SLKQ9H2G2 1235 aaPredicted RBP17.99■□□□□ 0.47
A1CF-202ENST00000373993 PRDM4Q9UKN5 801 aa17.99■□□□□ 0.47
A1CF-202ENST00000373993 NRKQ7Z2Y5 1582 aa17.98■□□□□ 0.47
A1CF-202ENST00000373993 ZBTB7CA1YPR0 619 aa17.98■□□□□ 0.47
A1CF-202ENST00000373993 SMAP1Q8IYB5 467 aaPredicted RBP17.98■□□□□ 0.47
A1CF-202ENST00000373993 STRN4Q9NRL3 753 aa17.98■□□□□ 0.47
A1CF-202ENST00000373993 USP6P35125 1406 aa17.98■□□□□ 0.47
A1CF-202ENST00000373993 E9PSI1 815 aa17.97■□□□□ 0.47
A1CF-202ENST00000373993 FAM98CQ17RN3 349 aaKnown RBP17.97■□□□□ 0.47
A1CF-202ENST00000373993 PANK2Q9BZ23 570 aa17.97■□□□□ 0.47
A1CF-202ENST00000373993 CNGB1Q14028 1251 aaPredicted RBP17.97■□□□□ 0.47
A1CF-202ENST00000373993 CLUAP1Q96AJ1 413 aa17.97■□□□□ 0.47
A1CF-202ENST00000373993 ADAMTS8Q9UP79 889 aa17.96■□□□□ 0.47
A1CF-202ENST00000373993 WDR43Q15061 677 aaKnown RBP eCLIP17.95■□□□□ 0.46
A1CF-202ENST00000373993 NLRP6P59044 892 aa17.95■□□□□ 0.46
A1CF-202ENST00000373993 ZSCAN30Q86W11 494 aa17.95■□□□□ 0.46
A1CF-202ENST00000373993 AKAP12Q02952 1782 aa17.95■□□□□ 0.46
A1CF-202ENST00000373993 PIK3C2AO00443 1686 aa17.94■□□□□ 0.46
A1CF-202ENST00000373993 SOX12O15370 315 aa17.93■□□□□ 0.46
A1CF-202ENST00000373993 IGHDP01880 384 aa17.93■□□□□ 0.46
A1CF-202ENST00000373993 NCLP19338 710 aaKnown RBP17.93■□□□□ 0.46
A1CF-202ENST00000373993 SENP3-EIF4A1A0A087X0R7 540 aa17.92■□□□□ 0.46
A1CF-202ENST00000373993 SEC24BO95487 1268 aa17.92■□□□□ 0.46
A1CF-202ENST00000373993 GCP02774 474 aa17.92■□□□□ 0.46
A1CF-202ENST00000373993 EVA1CP58658 441 aa17.91■□□□□ 0.46
A1CF-202ENST00000373993 KIAA1211Q6ZU35 1233 aa17.91■□□□□ 0.46
A1CF-202ENST00000373993 KRT27Q7Z3Y8 459 aa17.91■□□□□ 0.46
A1CF-202ENST00000373993 SNX21Q969T3 373 aa17.91■□□□□ 0.46
A1CF-202ENST00000373993 GBP4Q96PP9 640 aa17.91■□□□□ 0.46
A1CF-202ENST00000373993 SPATA31A5Q5VU36 1347 aa17.91■□□□□ 0.46
A1CF-202ENST00000373993 SPATA31A7Q8IWB4 1347 aa17.91■□□□□ 0.46
A1CF-202ENST00000373993 DDIT3P35638 169 aa17.91■□□□□ 0.46
A1CF-202ENST00000373993 TMF1P82094 1093 aa17.91■□□□□ 0.46
A1CF-202ENST00000373993 ANP32BQ92688 251 aaKnown RBP17.91■□□□□ 0.46
A1CF-202ENST00000373993 SBNO2Q9Y2G9 1366 aa17.9■□□□□ 0.46
A1CF-202ENST00000373993 ERBB4Q15303 1308 aa17.9■□□□□ 0.46
A1CF-202ENST00000373993 MCM5P33992 734 aa17.9■□□□□ 0.46
A1CF-202ENST00000373993 UTP14CQ5TAP6 766 aaKnown RBP17.9■□□□□ 0.46
A1CF-202ENST00000373993 TESK2Q96S53 571 aa17.9■□□□□ 0.46
A1CF-202ENST00000373993 CAMTA1Q9Y6Y1 1673 aa17.89■□□□□ 0.45
A1CF-202ENST00000373993 TTC21BQ7Z4L5 1316 aa17.89■□□□□ 0.45
A1CF-202ENST00000373993 ONECUT3O60422 494 aaPredicted RBP17.89■□□□□ 0.45
A1CF-202ENST00000373993 NCBP3Q53F19 620 aaKnown RBP17.89■□□□□ 0.45
A1CF-202ENST00000373993 FAM182BQ5T319 152 aa17.89■□□□□ 0.45
A1CF-202ENST00000373993 CLEC17AQ6ZS10 378 aa17.89■□□□□ 0.45
A1CF-202ENST00000373993 SSH2Q76I76 1423 aa17.88■□□□□ 0.45
A1CF-202ENST00000373993 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.88■□□□□ 0.45
A1CF-202ENST00000373993 ZNF692Q9BU19 519 aaPredicted RBP17.88■□□□□ 0.45
A1CF-202ENST00000373993 PANK3Q9H999 370 aa17.88■□□□□ 0.45
A1CF-202ENST00000373993 MON2Q7Z3U7 1717 aa17.88■□□□□ 0.45
A1CF-202ENST00000373993 LMO7Q8WWI1 1683 aa17.88■□□□□ 0.45
A1CF-202ENST00000373993 CPDO75976 1380 aa17.87■□□□□ 0.45
A1CF-202ENST00000373993 SPATA31A1Q5TZJ5 1347 aa17.87■□□□□ 0.45
A1CF-202ENST00000373993 PPP2R1AP30153 589 aa17.87■□□□□ 0.45
A1CF-202ENST00000373993 CSPP1Q1MSJ5 1256 aa17.87■□□□□ 0.45
A1CF-202ENST00000373993 LARP1Q6PKG0 1096 aaKnown RBP17.87■□□□□ 0.45
A1CF-202ENST00000373993 SMC5Q8IY18 1101 aa17.87■□□□□ 0.45
A1CF-202ENST00000373993 RWDD1Q9H446 243 aaPredicted RBP17.87■□□□□ 0.45
A1CF-202ENST00000373993 CPSF1Q10570 1443 aaKnown RBP17.87■□□□□ 0.45
A1CF-202ENST00000373993 SLIT3O75094 1523 aa17.87■□□□□ 0.45
A1CF-202ENST00000373993 ZNF500O60304 480 aaPredicted RBP17.86■□□□□ 0.45
A1CF-202ENST00000373993 CDCA8Q53HL2 280 aa17.86■□□□□ 0.45
A1CF-202ENST00000373993 SLC12A5Q9H2X9 1139 aa17.86■□□□□ 0.45
A1CF-202ENST00000373993 HSCBQ8IWL3 235 aa17.86■□□□□ 0.45
A1CF-202ENST00000373993 THSD7AQ9UPZ6 1657 aa17.85■□□□□ 0.45
A1CF-202ENST00000373993 DYNC1I1O14576 645 aa17.85■□□□□ 0.45
A1CF-202ENST00000373993 SF3B2Q13435 895 aaKnown RBP17.84■□□□□ 0.45
A1CF-202ENST00000373993 C22orf23Q9BZE7 217 aa17.84■□□□□ 0.45
A1CF-202ENST00000373993 SRCAPQ6ZRS2 3230 aa17.84■□□□□ 0.45
A1CF-202ENST00000373993 CD163L1Q9NR16 1453 aa17.84■□□□□ 0.45
A1CF-202ENST00000373993 SLC24A1O60721 1099 aa17.84■□□□□ 0.45
A1CF-202ENST00000373993 MSNP26038 577 aaKnown RBP17.84■□□□□ 0.45
A1CF-202ENST00000373993 CC2D1BQ5T0F9 858 aaKnown RBP17.84■□□□□ 0.45
A1CF-202ENST00000373993 DEFB132Q7Z7B7 95 aa17.84■□□□□ 0.45
A1CF-202ENST00000373993 ZRANB1Q9UGI0 708 aa17.84■□□□□ 0.45
A1CF-202ENST00000373993 TTC21AQ8NDW8 1320 aa17.83■□□□□ 0.45
A1CF-202ENST00000373993 COL5A2P05997 1499 aaPredicted RBP17.83■□□□□ 0.45
A1CF-202ENST00000373993 HDGFL2Q7Z4V5 671 aaPredicted RBP17.83■□□□□ 0.44
A1CF-202ENST00000373993 CCDC125Q86Z20 511 aa17.83■□□□□ 0.44
A1CF-202ENST00000373993 GZF1Q9H116 711 aaPredicted RBP17.83■□□□□ 0.44
A1CF-202ENST00000373993 RGPD5Q99666 1765 aa17.83■□□□□ 0.44
A1CF-202ENST00000373993 NME9Q86XW9 330 aa17.82■□□□□ 0.44
A1CF-202ENST00000373993 A0A1W2PP64 1363 aa17.81■□□□□ 0.44
A1CF-202ENST00000373993 RIPK4P57078 832 aa17.81■□□□□ 0.44
A1CF-202ENST00000373993 RBM10P98175 930 aaKnown RBP17.81■□□□□ 0.44
A1CF-202ENST00000373993 KNSTRNQ9Y448 316 aa17.81■□□□□ 0.44
A1CF-202ENST00000373993 RBM25P49756 843 aaKnown RBP17.8■□□□□ 0.44
A1CF-202ENST00000373993 RAB3GAP1Q15042 981 aa17.8■□□□□ 0.44
A1CF-202ENST00000373993 TCP11L2Q8N4U5 519 aa17.8■□□□□ 0.44
A1CF-202ENST00000373993 COL18A1P39060 1754 aa17.79■□□□□ 0.44
A1CF-202ENST00000373993 GOLGA6L22H0YM25 854 aa17.79■□□□□ 0.44
A1CF-202ENST00000373993 KCNH5Q8NCM2 988 aa17.79■□□□□ 0.44
A1CF-202ENST00000373993 TERF2IPQ9NYB0 399 aa17.79■□□□□ 0.44
A1CF-202ENST00000373993 NOL7Q9UMY1 257 aaKnown RBP17.79■□□□□ 0.44
A1CF-202ENST00000373993 AXIN2Q9Y2T1 843 aa17.79■□□□□ 0.44
A1CF-202ENST00000373993 AATKQ6ZMQ8 1374 aa17.79■□□□□ 0.44
A1CF-202ENST00000373993 AMER1Q5JTC6 1135 aaPredicted RBP17.79■□□□□ 0.44
A1CF-202ENST00000373993 TOM1L2Q6ZVM7 507 aa17.79■□□□□ 0.44
A1CF-202ENST00000373993 PDZRN3Q9UPQ7 1066 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms