RNA–Protein interactions for RNA: ENST00000373382.5

VPS26A-202, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene VPS26A, Length 3,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-202ENST00000373382 ERC2O15083 957 aa21.7■■□□□ 1.06
VPS26A-202ENST00000373382 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.7■■□□□ 1.06
VPS26A-202ENST00000373382 NECTIN2Q92692 538 aa21.7■■□□□ 1.06
VPS26A-202ENST00000373382 IL13P35225 146 aa21.7■■□□□ 1.06
VPS26A-202ENST00000373382 LMOD3Q0VAK6 560 aa21.7■■□□□ 1.06
VPS26A-202ENST00000373382 CLEC17AQ6ZS10 378 aa21.7■■□□□ 1.06
VPS26A-202ENST00000373382 UPF3BQ9BZI7 483 aaKnown RBP21.7■■□□□ 1.06
VPS26A-202ENST00000373382 ANO2Q9NQ90 1003 aa21.7■■□□□ 1.06
VPS26A-202ENST00000373382 NOL7Q9UMY1 257 aaKnown RBP21.7■■□□□ 1.06
VPS26A-202ENST00000373382 MED14O60244 1454 aa21.69■■□□□ 1.06
VPS26A-202ENST00000373382 SLC4A2P04920 1241 aa21.69■■□□□ 1.06
VPS26A-202ENST00000373382 SULT6B1Q6IMI4 303 aa21.69■■□□□ 1.06
VPS26A-202ENST00000373382 NEURL4Q96JN8 1562 aa21.69■■□□□ 1.06
VPS26A-202ENST00000373382 CYP2E1P05181 493 aaPredicted RBP21.68■■□□□ 1.06
VPS26A-202ENST00000373382 TMX3Q96JJ7 454 aa21.68■■□□□ 1.06
VPS26A-202ENST00000373382 PNPLA6Q8IY17 1366 aa21.68■■□□□ 1.06
VPS26A-202ENST00000373382 PTCH1Q13635 1447 aa21.68■■□□□ 1.06
VPS26A-202ENST00000373382 FAM135BQ49AJ0 1406 aa21.68■■□□□ 1.06
VPS26A-202ENST00000373382 DTNBO60941 627 aa21.68■■□□□ 1.06
VPS26A-202ENST00000373382 ZNF853P0CG23 659 aa21.68■■□□□ 1.06
VPS26A-202ENST00000373382 LRSAM1Q6UWE0 723 aa21.68■■□□□ 1.06
VPS26A-202ENST00000373382 COG3Q96JB2 828 aa21.68■■□□□ 1.06
VPS26A-202ENST00000373382 USP32Q8NFA0 1604 aa21.67■■□□□ 1.06
VPS26A-202ENST00000373382 CAMSAP1Q5T5Y3 1602 aa21.67■■□□□ 1.06
VPS26A-202ENST00000373382 YTHDC2Q9H6S0 1430 aaKnown RBP21.67■■□□□ 1.06
VPS26A-202ENST00000373382 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.67■■□□□ 1.06
VPS26A-202ENST00000373382 RPAP2Q8IXW5 612 aaPredicted RBP21.67■■□□□ 1.06
VPS26A-202ENST00000373382 ZNF830Q96NB3 372 aaPredicted RBP21.67■■□□□ 1.06
VPS26A-202ENST00000373382 ZKSCAN5Q9Y2L8 839 aa21.67■■□□□ 1.06
VPS26A-202ENST00000373382 PPLO60437 1756 aa21.67■■□□□ 1.06
VPS26A-202ENST00000373382 ZC3H13Q5T200 1668 aaKnown RBP21.66■■□□□ 1.06
VPS26A-202ENST00000373382 KIDINS220Q9ULH0 1771 aa21.66■■□□□ 1.06
VPS26A-202ENST00000373382 MSH6P52701 1360 aa21.65■■□□□ 1.06
VPS26A-202ENST00000373382 LARP6Q9BRS8 491 aaKnown RBP21.65■■□□□ 1.06
VPS26A-202ENST00000373382 IBTKQ9P2D0 1353 aaPredicted RBP21.65■■□□□ 1.06
VPS26A-202ENST00000373382 ARAP3Q8WWN8 1544 aa21.65■■□□□ 1.06
VPS26A-202ENST00000373382 CD163L1Q9NR16 1453 aa21.64■■□□□ 1.05
VPS26A-202ENST00000373382 SLC52A1Q9NWF4 448 aa21.64■■□□□ 1.05
VPS26A-202ENST00000373382 PIK3R4Q99570 1358 aa21.64■■□□□ 1.05
VPS26A-202ENST00000373382 PALD1Q9ULE6 856 aa21.63■■□□□ 1.05
VPS26A-202ENST00000373382 JARID2Q92833 1246 aaPredicted RBP21.63■■□□□ 1.05
VPS26A-202ENST00000373382 PDE1AP54750 535 aa21.62■■□□□ 1.05
VPS26A-202ENST00000373382 CCDC39Q9UFE4 941 aa21.62■■□□□ 1.05
VPS26A-202ENST00000373382 ARHGEF28Q8N1W1 1705 aaKnown RBP21.62■■□□□ 1.05
VPS26A-202ENST00000373382 HMMRO75330 724 aa21.62■■□□□ 1.05
VPS26A-202ENST00000373382 G2E3Q7L622 706 aa21.62■■□□□ 1.05
VPS26A-202ENST00000373382 TXNDC2Q86VQ3 553 aa21.62■■□□□ 1.05
VPS26A-202ENST00000373382 TSC1Q92574 1164 aa21.62■■□□□ 1.05
VPS26A-202ENST00000373382 ABCA9Q8IUA7 1624 aa21.62■■□□□ 1.05
VPS26A-202ENST00000373382 PDLIM2Q96JY6 352 aa21.61■■□□□ 1.05
VPS26A-202ENST00000373382 GADD45BO75293 160 aaPredicted RBP21.61■■□□□ 1.05
VPS26A-202ENST00000373382 MAP4K4O95819 1239 aaPredicted RBP21.61■■□□□ 1.05
VPS26A-202ENST00000373382 TSPY26PQ9H489 355 aa21.61■■□□□ 1.05
VPS26A-202ENST00000373382 PRDM10Q9NQV6 1147 aa21.61■■□□□ 1.05
VPS26A-202ENST00000373382 RIMS2Q9UQ26 1411 aa21.61■■□□□ 1.05
VPS26A-202ENST00000373382 MLECQ14165 292 aa21.6■■□□□ 1.05
VPS26A-202ENST00000373382 ZFYVE9O95405 1425 aa21.6■■□□□ 1.05
VPS26A-202ENST00000373382 LMTK2Q8IWU2 1503 aa21.6■■□□□ 1.05
VPS26A-202ENST00000373382 ZNF500O60304 480 aaPredicted RBP21.59■■□□□ 1.05
VPS26A-202ENST00000373382 MCCP23508 829 aa21.59■■□□□ 1.05
VPS26A-202ENST00000373382 RTL1A6NKG5 1358 aa21.59■■□□□ 1.05
VPS26A-202ENST00000373382 C17orf53Q8N3J3 647 aaPredicted RBP21.59■■□□□ 1.05
VPS26A-202ENST00000373382 POGZQ7Z3K3 1410 aa21.59■■□□□ 1.05
VPS26A-202ENST00000373382 FAM177BA6PVY3 158 aa21.59■■□□□ 1.05
VPS26A-202ENST00000373382 MBD3O95983 291 aa21.59■■□□□ 1.05
VPS26A-202ENST00000373382 HS1BP3Q53T59 392 aa21.59■■□□□ 1.05
VPS26A-202ENST00000373382 ABCC3O15438 1527 aa21.58■■□□□ 1.04
VPS26A-202ENST00000373382 CSPP1Q1MSJ5 1256 aa21.57■■□□□ 1.04
VPS26A-202ENST00000373382 IL1RAPL2Q9NP60 686 aa21.57■■□□□ 1.04
VPS26A-202ENST00000373382 USP25Q9UHP3 1055 aa21.57■■□□□ 1.04
VPS26A-202ENST00000373382 NEXMIFQ5QGS0 1516 aa21.57■■□□□ 1.04
VPS26A-202ENST00000373382 FOXO3O43524 673 aa21.57■■□□□ 1.04
VPS26A-202ENST00000373382 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.56■■□□□ 1.041e-6■■■■□ 21.7
VPS26A-202ENST00000373382 PTPRMP28827 1452 aa21.56■■□□□ 1.04
VPS26A-202ENST00000373382 TSPYL4Q9UJ04 414 aa21.55■■□□□ 1.04
VPS26A-202ENST00000373382 SYAP1Q96A49 352 aaPredicted RBP21.55■■□□□ 1.04
VPS26A-202ENST00000373382 ESYT1Q9BSJ8 1104 aa21.55■■□□□ 1.04
VPS26A-202ENST00000373382 USP48Q86UV5 1035 aa21.54■■□□□ 1.04
VPS26A-202ENST00000373382 NUDT16Q96DE0 195 aaKnown RBP21.54■■□□□ 1.04
VPS26A-202ENST00000373382 TTC12Q9H892 705 aaPredicted RBP21.54■■□□□ 1.04
VPS26A-202ENST00000373382 ATP10DQ9P241 1426 aa21.54■■□□□ 1.04
VPS26A-202ENST00000373382 KIAA2012Q0VF49 1180 aa21.54■■□□□ 1.04
VPS26A-202ENST00000373382 FKBP5Q13451 457 aaPredicted RBP21.53■■□□□ 1.04
VPS26A-202ENST00000373382 EIF4A2Q14240 407 aaKnown RBP21.53■■□□□ 1.04
VPS26A-202ENST00000373382 BRD1O95696 1058 aa21.53■■□□□ 1.04
VPS26A-202ENST00000373382 HSP90AB2PQ58FF8 381 aa21.53■■□□□ 1.04
VPS26A-202ENST00000373382 HAP1P54257 671 aaPredicted RBP21.53■■□□□ 1.04
VPS26A-202ENST00000373382 RTF1Q92541 710 aaKnown RBP21.53■■□□□ 1.04
VPS26A-202ENST00000373382 MX1P20591 662 aa21.52■■□□□ 1.04
VPS26A-202ENST00000373382 SASS6Q6UVJ0 657 aa21.52■■□□□ 1.04
VPS26A-202ENST00000373382 UNC5CLQ8IV45 518 aa21.52■■□□□ 1.04
VPS26A-202ENST00000373382 LRRCC1Q9C099 1032 aa21.52■■□□□ 1.04
VPS26A-202ENST00000373382 PLEKHG5O94827 1062 aa21.51■■□□□ 1.03
VPS26A-202ENST00000373382 GNAI2P04899 355 aa21.51■■□□□ 1.03
VPS26A-202ENST00000373382 NUTM1Q86Y26 1132 aa21.51■■□□□ 1.03
VPS26A-202ENST00000373382 PNMA6EA0A0J9YXQ4 647 aa21.51■■□□□ 1.03
VPS26A-202ENST00000373382 WASLO00401 505 aaPredicted RBP21.51■■□□□ 1.03
VPS26A-202ENST00000373382 CHL1O00533 1208 aa21.51■■□□□ 1.03
VPS26A-202ENST00000373382 FIBPO43427 364 aa21.51■■□□□ 1.03
VPS26A-202ENST00000373382 HCLS1P14317 486 aaPredicted RBP21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms