RNA–Protein interactions for RNA: ENST00000373243.6

NCDN-202, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-202ENST00000373243 LETM1O95202 739 aaPredicted RBP14.64□□□□□ -0.07
NCDN-202ENST00000373243 JARID2Q92833 1246 aaPredicted RBP14.64□□□□□ -0.07
NCDN-202ENST00000373243 SDSP20132 328 aa14.64□□□□□ -0.07
NCDN-202ENST00000373243 IFT57Q9NWB7 429 aa14.64□□□□□ -0.07
NCDN-202ENST00000373243 SHROOM2Q13796 1616 aa14.64□□□□□ -0.07
NCDN-202ENST00000373243 VPS37CA5D8V6 355 aaPredicted RBP14.63□□□□□ -0.07
NCDN-202ENST00000373243 ATP7AQ04656 1500 aa14.63□□□□□ -0.07
NCDN-202ENST00000373243 ABCC1P33527 1531 aa14.63□□□□□ -0.07
NCDN-202ENST00000373243 FIBPO43427 364 aa14.63□□□□□ -0.07
NCDN-202ENST00000373243 POLR1AO95602 1720 aaPredicted RBP14.63□□□□□ -0.07
NCDN-202ENST00000373243 RAB3GAP1Q15042 981 aa14.63□□□□□ -0.07
NCDN-202ENST00000373243 GTPBP4Q9BZE4 634 aaKnown RBP14.63□□□□□ -0.07
NCDN-202ENST00000373243 SLC26A8Q96RN1 970 aa14.62□□□□□ -0.07
NCDN-202ENST00000373243 ISY1Q9ULR0 285 aaKnown RBP14.62□□□□□ -0.07
NCDN-202ENST00000373243 NUTM1Q86Y26 1132 aa14.62□□□□□ -0.07
NCDN-202ENST00000373243 GNAI2P04899 355 aa14.61□□□□□ -0.07
NCDN-202ENST00000373243 IRX3P78415 501 aaPredicted RBP14.61□□□□□ -0.07
NCDN-202ENST00000373243 CCDC61Q9Y6R9 512 aa14.61□□□□□ -0.07
NCDN-202ENST00000373243 ZNF518AQ6AHZ1 1483 aa14.61□□□□□ -0.07
NCDN-202ENST00000373243 CSPP1Q1MSJ5 1256 aa14.61□□□□□ -0.07
NCDN-202ENST00000373243 TTC22Q5TAA0 569 aa14.61□□□□□ -0.07
NCDN-202ENST00000373243 SNX21Q969T3 373 aa14.61□□□□□ -0.07
NCDN-202ENST00000373243 IL16Q14005 1332 aa14.61□□□□□ -0.07
NCDN-202ENST00000373243 YEATS2Q9ULM3 1422 aa14.61□□□□□ -0.07
NCDN-202ENST00000373243 UBTFL1P0CB47 393 aaPredicted RBP14.61□□□□□ -0.07
NCDN-202ENST00000373243 RBM25P49756 843 aaKnown RBP14.61□□□□□ -0.07
NCDN-202ENST00000373243 NLRP6P59044 892 aa14.61□□□□□ -0.07
NCDN-202ENST00000373243 PKP1Q13835 747 aa14.61□□□□□ -0.07
NCDN-202ENST00000373243 SASS6Q6UVJ0 657 aa14.61□□□□□ -0.07
NCDN-202ENST00000373243 PLEKHM2Q8IWE5 1019 aa14.61□□□□□ -0.07
NCDN-202ENST00000373243 RPAP2Q8IXW5 612 aaPredicted RBP14.61□□□□□ -0.07
NCDN-202ENST00000373243 DIAPH3Q9NSV4 1193 aa14.6□□□□□ -0.07
NCDN-202ENST00000373243 HSP90AB2PQ58FF8 381 aa14.6□□□□□ -0.07
NCDN-202ENST00000373243 TRERF1Q96PN7 1200 aa14.6□□□□□ -0.07
NCDN-202ENST00000373243 CROCC2H7BZ55 1655 aa14.6□□□□□ -0.07
NCDN-202ENST00000373243 LRRCC1Q9C099 1032 aa14.59□□□□□ -0.07
NCDN-202ENST00000373243 ZBTB9Q96C00 473 aa14.59□□□□□ -0.07
NCDN-202ENST00000373243 NSD2O96028 1365 aa14.59□□□□□ -0.07
NCDN-202ENST00000373243 PRIM1P49642 420 aaKnown RBP14.59□□□□□ -0.07
NCDN-202ENST00000373243 PLEKHF1Q96S99 279 aa14.59□□□□□ -0.07
NCDN-202ENST00000373243 FOXO3O43524 673 aa14.58□□□□□ -0.08
NCDN-202ENST00000373243 TERF1P54274 439 aa14.58□□□□□ -0.08
NCDN-202ENST00000373243 KLHL40Q2TBA0 621 aa14.58□□□□□ -0.08
NCDN-202ENST00000373243 ZSCAN23Q3MJ62 389 aa14.58□□□□□ -0.08
NCDN-202ENST00000373243 SECISBP2LQ93073 1101 aaKnown RBP14.58□□□□□ -0.08
NCDN-202ENST00000373243 SMC3Q9UQE7 1217 aa14.58□□□□□ -0.08
NCDN-202ENST00000373243 FOSBP53539 338 aa14.58□□□□□ -0.08
NCDN-202ENST00000373243 CHAF1AQ13111 956 aaPredicted RBP14.57□□□□□ -0.08
NCDN-202ENST00000373243 CWC22Q9HCG8 908 aaKnown RBP14.57□□□□□ -0.08
NCDN-202ENST00000373243 PHF14O94880 888 aa14.57□□□□□ -0.08
NCDN-202ENST00000373243 C9orf78Q9NZ63 289 aaPredicted RBP14.57□□□□□ -0.08
NCDN-202ENST00000373243 AIMP1Q12904 312 aaKnown RBP14.56□□□□□ -0.08
NCDN-202ENST00000373243 WASLO00401 505 aaPredicted RBP14.56□□□□□ -0.08
NCDN-202ENST00000373243 GSPT1P15170 499 aaKnown RBP14.56□□□□□ -0.08
NCDN-202ENST00000373243 CWC27Q6UX04 472 aaKnown RBP14.56□□□□□ -0.08
NCDN-202ENST00000373243 SPC24Q8NBT2 197 aa14.56□□□□□ -0.08
NCDN-202ENST00000373243 TSPY26PQ9H489 355 aa14.56□□□□□ -0.08
NCDN-202ENST00000373243 SYNMO15061 1565 aa14.56□□□□□ -0.08
NCDN-202ENST00000373243 GNAI3P08754 354 aa14.55□□□□□ -0.08
NCDN-202ENST00000373243 TEFQ10587 303 aa14.55□□□□□ -0.08
NCDN-202ENST00000373243 HDGFL1Q5TGJ6 251 aa14.55□□□□□ -0.08
NCDN-202ENST00000373243 MBD3O95983 291 aa14.55□□□□□ -0.08
NCDN-202ENST00000373243 TNNT3P45378 269 aaPredicted RBP14.55□□□□□ -0.08
NCDN-202ENST00000373243 TAF3Q5VWG9 929 aa14.55□□□□□ -0.08
NCDN-202ENST00000373243 G2E3Q7L622 706 aa14.55□□□□□ -0.08
NCDN-202ENST00000373243 DCTPP1Q9H773 170 aa14.55□□□□□ -0.08
NCDN-202ENST00000373243 KDM5AP29375 1690 aaKnown RBP14.55□□□□□ -0.08
NCDN-202ENST00000373243 MX1P20591 662 aa14.54□□□□□ -0.08
NCDN-202ENST00000373243 ZRSR1Q15695 479 aaKnown RBP14.54□□□□□ -0.08
NCDN-202ENST00000373243 USHBP1Q8N6Y0 703 aa14.54□□□□□ -0.08
NCDN-202ENST00000373243 ANKRD44Q8N8A2 993 aa14.54□□□□□ -0.08
NCDN-202ENST00000373243 ARHGAP45Q92619 1136 aa14.54□□□□□ -0.08
NCDN-202ENST00000373243 FBXW7Q969H0 707 aa14.54□□□□□ -0.08
NCDN-202ENST00000373243 TMX3Q96JJ7 454 aa14.54□□□□□ -0.08
NCDN-202ENST00000373243 A0A0G2JS52 829 aa14.54□□□□□ -0.08
NCDN-202ENST00000373243 APPP05067 770 aa14.54□□□□□ -0.08
NCDN-202ENST00000373243 HSP90B1P14625 803 aaKnown RBP14.54□□□□□ -0.08
NCDN-202ENST00000373243 SIRT2Q8IXJ6 389 aa14.54□□□□□ -0.08
NCDN-202ENST00000373243 LRRFIP2Q9Y608 721 aaKnown RBP14.54□□□□□ -0.08
NCDN-202ENST00000373243 ZFYVE16Q7Z3T8 1539 aa14.54□□□□□ -0.08
NCDN-202ENST00000373243 SRGAP3O43295 1099 aa14.54□□□□□ -0.08
NCDN-202ENST00000373243 ANXA1P04083 346 aa14.54□□□□□ -0.08
NCDN-202ENST00000373243 CCDC30Q5VVM6 783 aa14.54□□□□□ -0.08
NCDN-202ENST00000373243 USP26Q9BXU7 913 aa14.54□□□□□ -0.08
NCDN-202ENST00000373243 ATP2B3Q16720 1220 aa14.53□□□□□ -0.08
NCDN-202ENST00000373243 CEP85Q6P2H3 762 aa14.53□□□□□ -0.08
NCDN-202ENST00000373243 NPATQ14207 1427 aa14.53□□□□□ -0.08
NCDN-202ENST00000373243 IFIT2P09913 472 aaKnown RBP14.53□□□□□ -0.08
NCDN-202ENST00000373243 CCT4P50991 539 aaKnown RBP14.53□□□□□ -0.08
NCDN-202ENST00000373243 FERMT3Q86UX7 667 aa14.53□□□□□ -0.08
NCDN-202ENST00000373243 RBSNQ9H1K0 784 aa14.53□□□□□ -0.08
NCDN-202ENST00000373243 POGZQ7Z3K3 1410 aa14.53□□□□□ -0.08
NCDN-202ENST00000373243 RBM33Q96EV2 1170 aaKnown RBP14.53□□□□□ -0.08
NCDN-202ENST00000373243 PHF23Q9BUL5 403 aaPredicted RBP14.53□□□□□ -0.08
NCDN-202ENST00000373243 CCDC39Q9UFE4 941 aa14.53□□□□□ -0.08
NCDN-202ENST00000373243 ZNF330Q9Y3S2 320 aaPredicted RBP14.53□□□□□ -0.08
NCDN-202ENST00000373243 ERICH4A6NGS2 130 aa14.52□□□□□ -0.08
NCDN-202ENST00000373243 PDE1AP54750 535 aa14.52□□□□□ -0.09
NCDN-202ENST00000373243 PDCL2Q8N4E4 241 aa14.52□□□□□ -0.09
NCDN-202ENST00000373243 TSPOAP1O95153 1857 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 228.8 ms