RNA–Protein interactions for RNA: ENST00000369367.7

SCAF11-202, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SCAF11, Length 7,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-202ENST00000369367 LMTK3Q96Q04 1460 aa11.76□□□□□ -0.53
SCAF11-202ENST00000369367 TMEM132AQ24JP5 1023 aa11.76□□□□□ -0.53
SCAF11-202ENST00000369367 RRP12Q5JTH9 1297 aaKnown RBP11.76□□□□□ -0.53
SCAF11-202ENST00000369367 NME9Q86XW9 330 aa11.76□□□□□ -0.53
SCAF11-202ENST00000369367 CDCA7Q9BWT1 371 aaPredicted RBP11.76□□□□□ -0.53
SCAF11-202ENST00000369367 KRT32Q14532 448 aa11.75□□□□□ -0.53
SCAF11-202ENST00000369367 KIAA0556O60303 1618 aa11.75□□□□□ -0.53
SCAF11-202ENST00000369367 PIP4K2AP48426 406 aaPredicted RBP11.75□□□□□ -0.53
SCAF11-202ENST00000369367 RAB11FIP3O75154 756 aa11.75□□□□□ -0.53
SCAF11-202ENST00000369367 IFIT5Q13325 482 aaKnown RBP11.75□□□□□ -0.53
SCAF11-202ENST00000369367 DUSP27Q5VZP5 1158 aa11.75□□□□□ -0.53
SCAF11-202ENST00000369367 ANKRD36BQ8N2N9 1353 aa11.75□□□□□ -0.53
SCAF11-202ENST00000369367 ACEP12821 1306 aa11.75□□□□□ -0.53
SCAF11-202ENST00000369367 RFC4P35249 363 aa11.75□□□□□ -0.53
SCAF11-202ENST00000369367 FOXD4L5Q5VV16 416 aaPredicted RBP11.75□□□□□ -0.53
SCAF11-202ENST00000369367 FOXD4L4Q8WXT5 416 aaPredicted RBP11.75□□□□□ -0.53
SCAF11-202ENST00000369367 PUS7Q96PZ0 661 aaKnown RBP11.75□□□□□ -0.53
SCAF11-202ENST00000369367 ST5P78524 1137 aa11.75□□□□□ -0.53
SCAF11-202ENST00000369367 ANKIB1Q9P2G1 1089 aa11.75□□□□□ -0.53
SCAF11-202ENST00000369367 EIF4G3O43432 1585 aaKnown RBP11.75□□□□□ -0.53
SCAF11-202ENST00000369367 EPS15P42566 896 aa11.75□□□□□ -0.53
SCAF11-202ENST00000369367 NAT10Q9H0A0 1025 aaKnown RBP11.74□□□□□ -0.53
SCAF11-202ENST00000369367 CCDC69A6NI79 296 aa11.74□□□□□ -0.53
SCAF11-202ENST00000369367 TDO2P48775 406 aa11.74□□□□□ -0.53
SCAF11-202ENST00000369367 ANKRD24Q8TF21 1146 aa11.74□□□□□ -0.53
SCAF11-202ENST00000369367 CHMP5Q9NZZ3 219 aa11.74□□□□□ -0.53
SCAF11-202ENST00000369367 ALDH1L2Q3SY69 923 aa11.74□□□□□ -0.53
SCAF11-202ENST00000369367 TSR2Q969E8 191 aaKnown RBP11.74□□□□□ -0.53
SCAF11-202ENST00000369367 UBAC1Q9BSL1 405 aa11.74□□□□□ -0.53
SCAF11-202ENST00000369367 C22orf23Q9BZE7 217 aa11.74□□□□□ -0.53
SCAF11-202ENST00000369367 TRMT112Q9UI30 125 aaKnown RBP11.74□□□□□ -0.53
SCAF11-202ENST00000369367 SLC5A1P13866 664 aa11.74□□□□□ -0.53
SCAF11-202ENST00000369367 ZNF396Q96N95 335 aaPredicted RBP11.74□□□□□ -0.53
SCAF11-202ENST00000369367 TBX22Q9Y458 520 aa11.74□□□□□ -0.53
SCAF11-202ENST00000369367 LDHCP07864 332 aa11.73□□□□□ -0.53
SCAF11-202ENST00000369367 SASS6Q6UVJ0 657 aa11.73□□□□□ -0.53
SCAF11-202ENST00000369367 OLFM4Q6UX06 510 aa11.73□□□□□ -0.53
SCAF11-202ENST00000369367 AACSQ86V21 672 aa11.73□□□□□ -0.53
SCAF11-202ENST00000369367 FKBP4Q02790 459 aaKnown RBP eCLIP11.73□□□□□ -0.53
SCAF11-202ENST00000369367 SIL1Q9H173 461 aa11.73□□□□□ -0.53
SCAF11-202ENST00000369367 MTMR7Q9Y216 660 aa11.73□□□□□ -0.53
SCAF11-202ENST00000369367 ANKRD18BA2A2Z9 1011 aa11.73□□□□□ -0.53
SCAF11-202ENST00000369367 NUP160Q12769 1436 aa11.73□□□□□ -0.53
SCAF11-202ENST00000369367 DDX46Q7L014 1031 aaKnown RBP11.73□□□□□ -0.53
SCAF11-202ENST00000369367 POLD1P28340 1107 aa11.73□□□□□ -0.53
SCAF11-202ENST00000369367 ATP10AO60312 1499 aa11.73□□□□□ -0.53
SCAF11-202ENST00000369367 C11orf95C9JLR9 678 aaPredicted RBP11.72□□□□□ -0.53
SCAF11-202ENST00000369367 ODF2Q5BJF6 829 aa11.72□□□□□ -0.53
SCAF11-202ENST00000369367 ZMYM3Q14202 1370 aa11.72□□□□□ -0.53
SCAF11-202ENST00000369367 SYCP2Q9BX26 1530 aa11.72□□□□□ -0.53
SCAF11-202ENST00000369367 DDB1Q16531 1140 aa11.72□□□□□ -0.53
SCAF11-202ENST00000369367 ZCRB1Q8TBF4 217 aaKnown RBP11.72□□□□□ -0.53
SCAF11-202ENST00000369367 KIF1BPQ96EK5 621 aa11.72□□□□□ -0.53
SCAF11-202ENST00000369367 NUP153P49790 1475 aaKnown RBP11.72□□□□□ -0.53
SCAF11-202ENST00000369367 CT47A1Q5JQC4 288 aaPredicted RBP11.72□□□□□ -0.53
SCAF11-202ENST00000369367 RDXP35241 583 aaKnown RBP11.72□□□□□ -0.53
SCAF11-202ENST00000369367 RABEP1Q15276 862 aa11.72□□□□□ -0.53
SCAF11-202ENST00000369367 NOL7Q9UMY1 257 aaKnown RBP11.72□□□□□ -0.53
SCAF11-202ENST00000369367 TRPM2O94759 1503 aa11.72□□□□□ -0.53
SCAF11-202ENST00000369367 WASF1Q92558 559 aa11.72□□□□□ -0.53
SCAF11-202ENST00000369367 AIDAQ96BJ3 306 aa11.72□□□□□ -0.53
SCAF11-202ENST00000369367 CYP46A1Q9Y6A2 500 aa11.72□□□□□ -0.53
SCAF11-202ENST00000369367 MPHOSPH10O00566 681 aaKnown RBP11.72□□□□□ -0.53
SCAF11-202ENST00000369367 CRACR2BQ8N4Y2 399 aaPredicted RBP11.72□□□□□ -0.53
SCAF11-202ENST00000369367 SLC4A3P48751 1232 aa11.71□□□□□ -0.53
SCAF11-202ENST00000369367 MVPQ14764 893 aaKnown RBP11.71□□□□□ -0.53
SCAF11-202ENST00000369367 KIF21AQ7Z4S6 1674 aa11.71□□□□□ -0.53
SCAF11-202ENST00000369367 SNRPA1P09661 255 aaKnown RBP11.71□□□□□ -0.53
SCAF11-202ENST00000369367 MAP3K12Q12852 859 aa11.71□□□□□ -0.53
SCAF11-202ENST00000369367 DZIP1Q86YF9 867 aaKnown RBP11.71□□□□□ -0.54
SCAF11-202ENST00000369367 OFD1O75665 1012 aa11.71□□□□□ -0.54
SCAF11-202ENST00000369367 KRT18P05783 430 aaKnown RBP11.71□□□□□ -0.54
SCAF11-202ENST00000369367 C8orf37Q96NL8 207 aa11.71□□□□□ -0.54
SCAF11-202ENST00000369367 RPRD2Q5VT52 1461 aaKnown RBP11.71□□□□□ -0.54
SCAF11-202ENST00000369367 SPTY2D1Q68D10 685 aaPredicted RBP11.7□□□□□ -0.54
SCAF11-202ENST00000369367 TNIP1Q15025 636 aa11.7□□□□□ -0.54
SCAF11-202ENST00000369367 ABCF2Q9UG63 623 aa11.7□□□□□ -0.54
SCAF11-202ENST00000369367 DNAI2Q9GZS0 605 aa11.7□□□□□ -0.54
SCAF11-202ENST00000369367 PTPRCP08575 1304 aa11.7□□□□□ -0.54
SCAF11-202ENST00000369367 MYO1BO43795 1136 aa11.69□□□□□ -0.54
SCAF11-202ENST00000369367 USP5P45974 858 aa11.69□□□□□ -0.54
SCAF11-202ENST00000369367 GLRX3O76003 335 aaKnown RBP11.69□□□□□ -0.54
SCAF11-202ENST00000369367 AEBP1Q8IUX7 1158 aa11.69□□□□□ -0.54
SCAF11-202ENST00000369367 DNAAF4Q8WXU2 420 aa11.69□□□□□ -0.54
SCAF11-202ENST00000369367 IDH1O75874 414 aaKnown RBP11.69□□□□□ -0.54
SCAF11-202ENST00000369367 IMMTQ16891 758 aaKnown RBP11.69□□□□□ -0.54
SCAF11-202ENST00000369367 SDF4Q9BRK5 362 aa11.69□□□□□ -0.54
SCAF11-202ENST00000369367 MYD88Q99836 296 aa11.69□□□□□ -0.54
SCAF11-202ENST00000369367 SHANK2Q9UPX8 1470 aa11.69□□□□□ -0.54
SCAF11-202ENST00000369367 PPP4R3BQ5MIZ7 849 aa11.69□□□□□ -0.54
SCAF11-202ENST00000369367 BMP2KQ9NSY1 1161 aaPredicted RBP11.69□□□□□ -0.54
SCAF11-202ENST00000369367 TRIM21P19474 475 aaKnown RBP11.68□□□□□ -0.54
SCAF11-202ENST00000369367 PDE4CQ08493 712 aa11.68□□□□□ -0.54
SCAF11-202ENST00000369367 NEO1Q92859 1461 aa11.68□□□□□ -0.54
SCAF11-202ENST00000369367 POLR3DP05423 398 aaPredicted RBP11.68□□□□□ -0.54
SCAF11-202ENST00000369367 MCM10Q7L590 875 aa11.68□□□□□ -0.54
SCAF11-202ENST00000369367 CWC25Q9NXE8 425 aaPredicted RBP11.68□□□□□ -0.54
SCAF11-202ENST00000369367 TTLL12Q14166 644 aaPredicted RBP11.68□□□□□ -0.54
SCAF11-202ENST00000369367 C6orf229H3BNL8 230 aa11.68□□□□□ -0.54
SCAF11-202ENST00000369367 IL2RBP14784 551 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms