RNA–Protein interactions for RNA: ENST00000369096.8

PRDM1-203, Transcript of PR/SET domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM1, Length 5,164 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-203ENST00000369096 UBAC1Q9BSL1 405 aa18.48■□□□□ 0.55
PRDM1-203ENST00000369096 ESPNB1AK53 854 aa18.48■□□□□ 0.55
PRDM1-203ENST00000369096 MIA2Q96PC5 1412 aa18.48■□□□□ 0.55
PRDM1-203ENST00000369096 RBM5P52756 815 aaKnown RBP eCLIP18.48■□□□□ 0.55
PRDM1-203ENST00000369096 FKBP4Q02790 459 aaKnown RBP eCLIP18.48■□□□□ 0.55
PRDM1-203ENST00000369096 PDCL2Q8N4E4 241 aa18.48■□□□□ 0.55
PRDM1-203ENST00000369096 SLC26A8Q96RN1 970 aa18.48■□□□□ 0.55
PRDM1-203ENST00000369096 ZNF76P36508 570 aa18.47■□□□□ 0.55
PRDM1-203ENST00000369096 MYOM3Q5VTT5 1437 aa18.47■□□□□ 0.55
PRDM1-203ENST00000369096 ZSCAN29Q8IWY8 852 aaPredicted RBP18.47■□□□□ 0.55
PRDM1-203ENST00000369096 CCDC148Q8NFR7 591 aa18.47■□□□□ 0.55
PRDM1-203ENST00000369096 PIBF1Q8WXW3 757 aa18.47■□□□□ 0.55
PRDM1-203ENST00000369096 MPHOSPH8Q99549 860 aa18.47■□□□□ 0.55
PRDM1-203ENST00000369096 SHTN1A0MZ66 631 aa18.46■□□□□ 0.55
PRDM1-203ENST00000369096 SMTNL1A8MU46 457 aa18.46■□□□□ 0.55
PRDM1-203ENST00000369096 GBP3Q9H0R5 595 aa18.46■□□□□ 0.55
PRDM1-203ENST00000369096 TDO2P48775 406 aa18.46■□□□□ 0.55
PRDM1-203ENST00000369096 ABTB2Q8N961 1025 aa18.46■□□□□ 0.55
PRDM1-203ENST00000369096 NOB1Q9ULX3 412 aaKnown RBP18.46■□□□□ 0.55
PRDM1-203ENST00000369096 NCOA2Q15596 1464 aa18.45■□□□□ 0.54
PRDM1-203ENST00000369096 ANAPC15P60006 121 aa18.45■□□□□ 0.54
PRDM1-203ENST00000369096 SRCIN1Q9C0H9 1055 aa18.45■□□□□ 0.54
PRDM1-203ENST00000369096 ZSCAN25Q6NSZ9 544 aa18.45■□□□□ 0.54
PRDM1-203ENST00000369096 JAKMIP1Q96N16 626 aaKnown RBP18.45■□□□□ 0.54
PRDM1-203ENST00000369096 PDRG1Q9NUG6 133 aa18.45■□□□□ 0.54
PRDM1-203ENST00000369096 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.45■□□□□ 0.54
PRDM1-203ENST00000369096 POTEJP0CG39 1038 aa18.45■□□□□ 0.54
PRDM1-203ENST00000369096 GSTTP1A0A1W2PQM5 241 aa18.44■□□□□ 0.54
PRDM1-203ENST00000369096 TMEM132EQ6IEE7 984 aa18.44■□□□□ 0.54
PRDM1-203ENST00000369096 PPP6R1Q9UPN7 881 aa18.44■□□□□ 0.54
PRDM1-203ENST00000369096 TSR2Q969E8 191 aaKnown RBP18.44■□□□□ 0.54
PRDM1-203ENST00000369096 IMMTQ16891 758 aaKnown RBP18.44■□□□□ 0.54
PRDM1-203ENST00000369096 STRN4Q9NRL3 753 aa18.44■□□□□ 0.54
PRDM1-203ENST00000369096 USP5P45974 858 aa18.43■□□□□ 0.54
PRDM1-203ENST00000369096 PDE3AQ14432 1141 aa18.43■□□□□ 0.54
PRDM1-203ENST00000369096 ZNF397Q8NF99 534 aaPredicted RBP18.43■□□□□ 0.54
PRDM1-203ENST00000369096 CCDC7Q96M83 1385 aa18.43■□□□□ 0.54
PRDM1-203ENST00000369096 SFPQP23246 707 aaKnown RBP eCLIP18.43■□□□□ 0.54
PRDM1-203ENST00000369096 CTNNA3Q9UI47 895 aa18.43■□□□□ 0.54
PRDM1-203ENST00000369096 CCT4P50991 539 aaKnown RBP18.43■□□□□ 0.54
PRDM1-203ENST00000369096 SPA17Q15506 151 aa18.43■□□□□ 0.54
PRDM1-203ENST00000369096 PPP1R12BO60237 982 aaPredicted RBP18.42■□□□□ 0.54
PRDM1-203ENST00000369096 AACSQ86V21 672 aa18.42■□□□□ 0.54
PRDM1-203ENST00000369096 STAMBPO95630 424 aa18.42■□□□□ 0.54
PRDM1-203ENST00000369096 ZSCAN31Q96LW9 406 aaPredicted RBP18.42■□□□□ 0.54
PRDM1-203ENST00000369096 MAP3K11Q16584 847 aa18.42■□□□□ 0.54
PRDM1-203ENST00000369096 DDX11Q96FC9 970 aa18.42■□□□□ 0.54
PRDM1-203ENST00000369096 CFAP43Q8NDM7 1665 aa18.41■□□□□ 0.54
PRDM1-203ENST00000369096 CWC27Q6UX04 472 aaKnown RBP18.41■□□□□ 0.54
PRDM1-203ENST00000369096 LUZP1Q86V48 1076 aa18.41■□□□□ 0.54
PRDM1-203ENST00000369096 PTPN14Q15678 1187 aa18.41■□□□□ 0.54
PRDM1-203ENST00000369096 RAI14Q9P0K7 980 aa18.41■□□□□ 0.54
PRDM1-203ENST00000369096 CEP126Q9P2H0 1117 aa18.41■□□□□ 0.54
PRDM1-203ENST00000369096 CTTNBP2Q8WZ74 1663 aa18.41■□□□□ 0.54
PRDM1-203ENST00000369096 GPRASP1Q5JY77 1395 aa18.4■□□□□ 0.54
PRDM1-203ENST00000369096 TATP17735 454 aaPredicted RBP18.4■□□□□ 0.54
PRDM1-203ENST00000369096 IFFO1Q0D2I5 559 aa18.4■□□□□ 0.54
PRDM1-203ENST00000369096 FERMT3Q86UX7 667 aa18.4■□□□□ 0.54
PRDM1-203ENST00000369096 TICAM2Q86XR7 235 aa18.4■□□□□ 0.54
PRDM1-203ENST00000369096 MACROD2A1Z1Q3 448 aa18.4■□□□□ 0.54
PRDM1-203ENST00000369096 RRP9O43818 475 aaKnown RBP18.4■□□□□ 0.54
PRDM1-203ENST00000369096 MCM4P33991 863 aa18.4■□□□□ 0.54
PRDM1-203ENST00000369096 KIF4BQ2VIQ3 1234 aa18.4■□□□□ 0.54
PRDM1-203ENST00000369096 BCAR3O75815 825 aa18.4■□□□□ 0.54
PRDM1-203ENST00000369096 DNA2P51530 1060 aa18.4■□□□□ 0.54
PRDM1-203ENST00000369096 TRIM21P19474 475 aaKnown RBP18.39■□□□□ 0.54
PRDM1-203ENST00000369096 UBE4AQ14139 1066 aa18.39■□□□□ 0.54
PRDM1-203ENST00000369096 SRGAP3O43295 1099 aa18.39■□□□□ 0.53
PRDM1-203ENST00000369096 URI1O94763 535 aaPredicted RBP18.39■□□□□ 0.53
PRDM1-203ENST00000369096 WASF1Q92558 559 aa18.39■□□□□ 0.53
PRDM1-203ENST00000369096 CEP63Q96MT8 703 aa18.39■□□□□ 0.53
PRDM1-203ENST00000369096 EHBP1L1Q8N3D4 1523 aa18.39■□□□□ 0.53
PRDM1-203ENST00000369096 KIF2AO00139 706 aaPredicted RBP18.39■□□□□ 0.53
PRDM1-203ENST00000369096 KRT32Q14532 448 aa18.39■□□□□ 0.53
PRDM1-203ENST00000369096 SMC1AQ14683 1233 aaKnown RBP18.39■□□□□ 0.53
PRDM1-203ENST00000369096 CAMK4Q16566 473 aa18.39■□□□□ 0.53
PRDM1-203ENST00000369096 PPM1FP49593 454 aaPredicted RBP18.39■□□□□ 0.53
PRDM1-203ENST00000369096 KLHL10Q6JEL2 608 aa18.39■□□□□ 0.53
PRDM1-203ENST00000369096 MYL6BP14649 208 aa18.38■□□□□ 0.53
PRDM1-203ENST00000369096 IL1RAPL2Q9NP60 686 aa18.38■□□□□ 0.53
PRDM1-203ENST00000369096 SYCE3A1L190 88 aa18.38■□□□□ 0.53
PRDM1-203ENST00000369096 ZSCAN12O43309 604 aa18.38■□□□□ 0.53
PRDM1-203ENST00000369096 CABP4P57796 275 aa18.38■□□□□ 0.53
PRDM1-203ENST00000369096 MAP9Q49MG5 647 aa18.38■□□□□ 0.53
PRDM1-203ENST00000369096 ESCO1Q5FWF5 840 aa18.38■□□□□ 0.53
PRDM1-203ENST00000369096 SPECC1Q5M775 1068 aa18.38■□□□□ 0.53
PRDM1-203ENST00000369096 CACNA2D4Q7Z3S7 1137 aa18.38■□□□□ 0.53
PRDM1-203ENST00000369096 BRD4O60885 1362 aaPredicted RBP18.38■□□□□ 0.53
PRDM1-203ENST00000369096 CNTLNQ9NXG0 1405 aa18.38■□□□□ 0.53
PRDM1-203ENST00000369096 CYB5RLQ6IPT4 315 aa18.38■□□□□ 0.53
PRDM1-203ENST00000369096 ZSCAN30Q86W11 494 aa18.38■□□□□ 0.53
PRDM1-203ENST00000369096 PODXL2Q9NZ53 605 aa18.38■□□□□ 0.53
PRDM1-203ENST00000369096 LRP2BPQ9P2M1 347 aa18.38■□□□□ 0.53
PRDM1-203ENST00000369096 HOOK3Q86VS8 718 aa18.37■□□□□ 0.53
PRDM1-203ENST00000369096 DDX54Q8TDD1 881 aaKnown RBP18.37■□□□□ 0.53
PRDM1-203ENST00000369096 KIF5CO60282 957 aa18.37■□□□□ 0.53
PRDM1-203ENST00000369096 IDH1O75874 414 aaKnown RBP18.37■□□□□ 0.53
PRDM1-203ENST00000369096 SULT6B1Q6IMI4 303 aa18.37■□□□□ 0.53
PRDM1-203ENST00000369096 CTNNBL1Q8WYA6 563 aaPredicted RBP18.37■□□□□ 0.53
PRDM1-203ENST00000369096 CIZ1Q9ULV3 898 aaPredicted RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms