RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 LY75O60449 1722 aa22.36■■□□□ 1.17
CKS1B-202ENST00000368436 DCAF8L1A6NGE4 600 aa22.35■■□□□ 1.17
CKS1B-202ENST00000368436 SLC27A3Q5K4L6 730 aa22.35■■□□□ 1.17
CKS1B-202ENST00000368436 CARD14Q9BXL6 1004 aa22.35■■□□□ 1.17
CKS1B-202ENST00000368436 PRIM1P49642 420 aaKnown RBP22.34■■□□□ 1.17
CKS1B-202ENST00000368436 ZNF827Q17R98 1081 aa22.34■■□□□ 1.17
CKS1B-202ENST00000368436 NSD2O96028 1365 aa22.34■■□□□ 1.17
CKS1B-202ENST00000368436 INSRP06213 1382 aa22.34■■□□□ 1.17
CKS1B-202ENST00000368436 KIF24Q5T7B8 1368 aa22.34■■□□□ 1.17
CKS1B-202ENST00000368436 CGNL1Q0VF96 1302 aa22.33■■□□□ 1.17
CKS1B-202ENST00000368436 AKT1S1Q96B36 256 aa22.33■■□□□ 1.17
CKS1B-202ENST00000368436 CLSPNQ9HAW4 1339 aa22.32■■□□□ 1.16
CKS1B-202ENST00000368436 SMG6Q86US8 1419 aaKnown RBP22.32■■□□□ 1.16
CKS1B-202ENST00000368436 YY1P25490 414 aa22.32■■□□□ 1.16
CKS1B-202ENST00000368436 FLT4P35916 1363 aa22.31■■□□□ 1.16
CKS1B-202ENST00000368436 HSP90AB2PQ58FF8 381 aa22.31■■□□□ 1.16
CKS1B-202ENST00000368436 TUBGCP6Q96RT7 1819 aa22.3■■□□□ 1.16
CKS1B-202ENST00000368436 USHBP1Q8N6Y0 703 aa22.3■■□□□ 1.16
CKS1B-202ENST00000368436 SYTL4Q96C24 671 aaPredicted RBP22.3■■□□□ 1.16
CKS1B-202ENST00000368436 COL24A1Q17RW2 1714 aa22.3■■□□□ 1.16
CKS1B-202ENST00000368436 RAPGEF4Q8WZA2 1011 aa22.29■■□□□ 1.16
CKS1B-202ENST00000368436 SYT17Q9BSW7 474 aa22.29■■□□□ 1.16
CKS1B-202ENST00000368436 FHDC1Q9C0D6 1143 aaPredicted RBP22.29■■□□□ 1.16
CKS1B-202ENST00000368436 NSD3Q9BZ95 1437 aa22.29■■□□□ 1.16
CKS1B-202ENST00000368436 ANKRD26Q9UPS8 1709 aa22.28■■□□□ 1.16
CKS1B-202ENST00000368436 TATP17735 454 aaPredicted RBP22.27■■□□□ 1.16
CKS1B-202ENST00000368436 SLC16A10Q8TF71 515 aa22.26■■□□□ 1.15
CKS1B-202ENST00000368436 ARXQ96QS3 562 aa22.26■■□□□ 1.15
CKS1B-202ENST00000368436 MAP2P11137 1827 aaKnown RBP22.25■■□□□ 1.15
CKS1B-202ENST00000368436 KCNQ4P56696 695 aa22.25■■□□□ 1.15
CKS1B-202ENST00000368436 PNPLA7Q6ZV29 1317 aa22.25■■□□□ 1.15
CKS1B-202ENST00000368436 MAP3K5Q99683 1374 aa22.25■■□□□ 1.15
CKS1B-202ENST00000368436 EMILIN1Q9Y6C2 1016 aa22.24■■□□□ 1.15
CKS1B-202ENST00000368436 NCAPD2Q15021 1401 aa22.23■■□□□ 1.15
CKS1B-202ENST00000368436 PKD1L3Q7Z443 1732 aa22.23■■□□□ 1.15
CKS1B-202ENST00000368436 PCGF6Q9BYE7 350 aa22.23■■□□□ 1.15
CKS1B-202ENST00000368436 PCDH11XQ9BZA7 1347 aa22.23■■□□□ 1.15
CKS1B-202ENST00000368436 PCDH11YQ9BZA8 1340 aa22.23■■□□□ 1.15
CKS1B-202ENST00000368436 TFCP2L1Q9NZI6 479 aa22.22■■□□□ 1.15
CKS1B-202ENST00000368436 CCNL1Q9UK58 526 aaPredicted RBP22.22■■□□□ 1.15
CKS1B-202ENST00000368436 ITGB4P16144 1822 aa22.21■■□□□ 1.15
CKS1B-202ENST00000368436 WASHC2AQ641Q2 1341 aa22.2■■□□□ 1.14
CKS1B-202ENST00000368436 TOGARAM1Q9Y4F4 1720 aa22.2■■□□□ 1.14
CKS1B-202ENST00000368436 CYP27B1O15528 508 aa22.19■■□□□ 1.14
CKS1B-202ENST00000368436 C5P01031 1676 aa22.19■■□□□ 1.14
CKS1B-202ENST00000368436 CHD4Q14839 1912 aa22.18■■□□□ 1.14
CKS1B-202ENST00000368436 TAF1LQ8IZX4 1826 aa22.18■■□□□ 1.14
CKS1B-202ENST00000368436 PPM1GO15355 546 aaPredicted RBP22.16■■□□□ 1.14
CKS1B-202ENST00000368436 POLD1P28340 1107 aa22.16■■□□□ 1.14
CKS1B-202ENST00000368436 POLKQ9UBT6 870 aa22.16■■□□□ 1.14
CKS1B-202ENST00000368436 NKX1-1Q15270 411 aaPredicted RBP22.14■■□□□ 1.13
CKS1B-202ENST00000368436 MPRIPQ6WCQ1 1025 aa22.14■■□□□ 1.13
CKS1B-202ENST00000368436 EYA1Q99502 592 aa22.14■■□□□ 1.13
CKS1B-202ENST00000368436 PALLDQ8WX93 1383 aa22.13■■□□□ 1.13
CKS1B-202ENST00000368436 HMGB2P26583 209 aaKnown RBP22.13■■□□□ 1.13
CKS1B-202ENST00000368436 COL23A1Q86Y22 540 aaPredicted RBP22.13■■□□□ 1.13
CKS1B-202ENST00000368436 EIF4G2P78344 907 aaKnown RBP eCLIP22.12■■□□□ 1.13
CKS1B-202ENST00000368436 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.12■■□□□ 1.13
CKS1B-202ENST00000368436 SPG7Q9UQ90 795 aa22.12■■□□□ 1.13
CKS1B-202ENST00000368436 POLR3GLQ9BT43 218 aa22.11■■□□□ 1.13
CKS1B-202ENST00000368436 HSPA5P11021 654 aaKnown RBP22.1■■□□□ 1.13
CKS1B-202ENST00000368436 SMARCC1Q92922 1105 aaPredicted RBP22.1■■□□□ 1.13
CKS1B-202ENST00000368436 PIGBQ92521 554 aa22.09■■□□□ 1.13
CKS1B-202ENST00000368436 C4BP0C0L5 1744 aa22.09■■□□□ 1.13
CKS1B-202ENST00000368436 UTRNP46939 3433 aa22.08■■□□□ 1.13
CKS1B-202ENST00000368436 MSH5O43196 834 aa22.08■■□□□ 1.13
CKS1B-202ENST00000368436 EIF4A2Q14240 407 aaKnown RBP22.07■■□□□ 1.12
CKS1B-202ENST00000368436 KLHL34Q8N239 644 aa22.07■■□□□ 1.12
CKS1B-202ENST00000368436 ZNF784Q8NCA9 323 aaPredicted RBP22.07■■□□□ 1.12
CKS1B-202ENST00000368436 FLAD1Q8NFF5 587 aa22.07■■□□□ 1.12
CKS1B-202ENST00000368436 PANK3Q9H999 370 aa22.07■■□□□ 1.12
CKS1B-202ENST00000368436 TNNT2P45379 298 aaPredicted RBP22.06■■□□□ 1.12
CKS1B-202ENST00000368436 GPR162Q16538 588 aa22.06■■□□□ 1.12
CKS1B-202ENST00000368436 PLEKHG2Q9H7P9 1386 aa22.06■■□□□ 1.12
CKS1B-202ENST00000368436 UBR3Q6ZT12 1888 aa22.06■■□□□ 1.12
CKS1B-202ENST00000368436 PHKG2P15735 406 aa22.05■■□□□ 1.12
CKS1B-202ENST00000368436 IFNL2Q8IZJ0 200 aa22.05■■□□□ 1.12
CKS1B-202ENST00000368436 NLGN2Q8NFZ4 835 aa22.04■■□□□ 1.12
CKS1B-202ENST00000368436 IGSF1Q8N6C5 1336 aa22.03■■□□□ 1.12
CKS1B-202ENST00000368436 MSL1Q68DK7 614 aa22.02■■□□□ 1.12
CKS1B-202ENST00000368436 CCER1Q8TC90 406 aaPredicted RBP22.02■■□□□ 1.12
CKS1B-202ENST00000368436 TMOD3Q9NYL9 352 aa22.02■■□□□ 1.12
CKS1B-202ENST00000368436 LOC102724428A0A0B4J2F2 783 aa22.01■■□□□ 1.11
CKS1B-202ENST00000368436 SIK1P57059 783 aa22.01■■□□□ 1.11
CKS1B-202ENST00000368436 AK7Q96M32 723 aa22.01■■□□□ 1.11
CKS1B-202ENST00000368436 AMIGO3Q86WK7 504 aa22■■□□□ 1.11
CKS1B-202ENST00000368436 ASAP1Q9ULH1 1129 aa22■■□□□ 1.11
CKS1B-202ENST00000368436 LINC00116Q8NCU8 138 aa21.98■■□□□ 1.11
CKS1B-202ENST00000368436 PELP1Q8IZL8 1130 aaKnown RBP21.97■■□□□ 1.11
CKS1B-202ENST00000368436 ATG3Q9NT62 314 aa21.97■■□□□ 1.11
CKS1B-202ENST00000368436 CD2APQ9Y5K6 639 aa21.97■■□□□ 1.11
CKS1B-202ENST00000368436 ZNF831Q5JPB2 1677 aa21.97■■□□□ 1.11
CKS1B-202ENST00000368436 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.96■■□□□ 1.11
CKS1B-202ENST00000368436 SSFA2P28290 1259 aa21.96■■□□□ 1.11
CKS1B-202ENST00000368436 ITPK1Q13572 414 aa21.96■■□□□ 1.11
CKS1B-202ENST00000368436 MORC1Q86VD1 984 aa21.96■■□□□ 1.11
CKS1B-202ENST00000368436 ERVV-2B6SEH9 535 aa21.95■■□□□ 1.1
CKS1B-202ENST00000368436 YBX3P16989 372 aaKnown RBP eCLIP21.95■■□□□ 1.1
CKS1B-202ENST00000368436 SMIM5Q71RC9 77 aa21.95■■□□□ 1.1
CKS1B-202ENST00000368436 GRIN3BO60391 1043 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms