RNA–Protein interactions for RNA: ENST00000366814.3

H3F3A-202, Transcript of H3 histone family member 3A, humanhuman

TSL 2 BASIC

Gene H3F3A, Length 1,863 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-202ENST00000366814 MYH16Q9H6N6 1097 aa14.12□□□□□ -0.15
H3F3A-202ENST00000366814 RRP7AQ9Y3A4 280 aaKnown RBP14.12□□□□□ -0.15
H3F3A-202ENST00000366814 NME9Q86XW9 330 aa14.11□□□□□ -0.15
H3F3A-202ENST00000366814 PPM1GO15355 546 aaPredicted RBP14.1□□□□□ -0.15
H3F3A-202ENST00000366814 SOX12O15370 315 aa14.1□□□□□ -0.15
H3F3A-202ENST00000366814 PLIN1O60240 522 aa14.1□□□□□ -0.15
H3F3A-202ENST00000366814 FAM98CQ17RN3 349 aaKnown RBP14.1□□□□□ -0.15
H3F3A-202ENST00000366814 NRKQ7Z2Y5 1582 aa14.1□□□□□ -0.15
H3F3A-202ENST00000366814 POLKQ9UBT6 870 aa14.1□□□□□ -0.15
H3F3A-202ENST00000366814 PIK3C2AO00443 1686 aa14.1□□□□□ -0.15
H3F3A-202ENST00000366814 CPDO75976 1380 aa14.1□□□□□ -0.15
H3F3A-202ENST00000366814 ONECUT3O60422 494 aaPredicted RBP14.1□□□□□ -0.15
H3F3A-202ENST00000366814 FCHSD2O94868 740 aa14.1□□□□□ -0.15
H3F3A-202ENST00000366814 SPATA31A5Q5VU36 1347 aa14.09□□□□□ -0.15
H3F3A-202ENST00000366814 SPATA31A7Q8IWB4 1347 aa14.09□□□□□ -0.15
H3F3A-202ENST00000366814 BRWD3Q6RI45 1802 aa14.09□□□□□ -0.15
H3F3A-202ENST00000366814 KCNH5Q8NCM2 988 aa14.09□□□□□ -0.15
H3F3A-202ENST00000366814 PLEKHF1Q96S99 279 aa14.08□□□□□ -0.16
H3F3A-202ENST00000366814 USP35Q9P2H5 1018 aa14.08□□□□□ -0.16
H3F3A-202ENST00000366814 TMPOP42166 694 aaKnown RBP14.08□□□□□ -0.16
H3F3A-202ENST00000366814 CRBNQ96SW2 442 aa14.08□□□□□ -0.16
H3F3A-202ENST00000366814 ZRANB1Q9UGI0 708 aa14.07□□□□□ -0.16
H3F3A-202ENST00000366814 SLIT3O75094 1523 aa14.07□□□□□ -0.16
H3F3A-202ENST00000366814 CAMTA1Q9Y6Y1 1673 aa14.06□□□□□ -0.16
H3F3A-202ENST00000366814 CANXP27824 592 aaKnown RBP14.06□□□□□ -0.16
H3F3A-202ENST00000366814 KRT27Q7Z3Y8 459 aa14.06□□□□□ -0.16
H3F3A-202ENST00000366814 SPATA31A1Q5TZJ5 1347 aa14.06□□□□□ -0.16
H3F3A-202ENST00000366814 CT47B1P0C2W7 299 aaPredicted RBP14.06□□□□□ -0.16
H3F3A-202ENST00000366814 LARP1Q6PKG0 1096 aaKnown RBP14.06□□□□□ -0.16
H3F3A-202ENST00000366814 RBM19Q9Y4C8 960 aaKnown RBP14.06□□□□□ -0.16
H3F3A-202ENST00000366814 PROM2Q8N271 834 aa14.05□□□□□ -0.16
H3F3A-202ENST00000366814 EMILIN1Q9Y6C2 1016 aa14.05□□□□□ -0.16
H3F3A-202ENST00000366814 IL16Q14005 1332 aa14.05□□□□□ -0.16
H3F3A-202ENST00000366814 ARHGEF25Q86VW2 580 aa14.04□□□□□ -0.16
H3F3A-202ENST00000366814 LMO7Q8WWI1 1683 aa14.04□□□□□ -0.16
H3F3A-202ENST00000366814 OVOS2A0A0J9YW53 1432 aa14.04□□□□□ -0.16
H3F3A-202ENST00000366814 OVOS2Q6IE36 1432 aa14.04□□□□□ -0.16
H3F3A-202ENST00000366814 RIPK4P57078 832 aa14.04□□□□□ -0.16
H3F3A-202ENST00000366814 USP31Q70CQ4 1352 aa14.03□□□□□ -0.16
H3F3A-202ENST00000366814 PRKAR2BP31323 418 aa14.03□□□□□ -0.16
H3F3A-202ENST00000366814 CCDC125Q86Z20 511 aa14.03□□□□□ -0.16
H3F3A-202ENST00000366814 RSPH6AQ9H0K4 717 aa14.03□□□□□ -0.16
H3F3A-202ENST00000366814 IL13P35225 146 aa14.02□□□□□ -0.16
H3F3A-202ENST00000366814 CALD1Q05682 793 aaKnown RBP14.02□□□□□ -0.16
H3F3A-202ENST00000366814 PDE3AQ14432 1141 aa14.02□□□□□ -0.16
H3F3A-202ENST00000366814 AXIN2Q9Y2T1 843 aa14.02□□□□□ -0.16
H3F3A-202ENST00000366814 RGPD5Q99666 1765 aa14.02□□□□□ -0.17
H3F3A-202ENST00000366814 BCAR3O75815 825 aa14.01□□□□□ -0.17
H3F3A-202ENST00000366814 FBLN1P23142 703 aa14.01□□□□□ -0.17
H3F3A-202ENST00000366814 C20orf194Q5TEA3 1177 aa14.01□□□□□ -0.17
H3F3A-202ENST00000366814 TOM1L2Q6ZVM7 507 aa14.01□□□□□ -0.17
H3F3A-202ENST00000366814 COL5A2P05997 1499 aaPredicted RBP14.01□□□□□ -0.17
H3F3A-202ENST00000366814 COL18A1P39060 1754 aa14.01□□□□□ -0.17
H3F3A-202ENST00000366814 CSB-PGBD3P0DP91 1061 aa14.01□□□□□ -0.17
H3F3A-202ENST00000366814 SF3B2Q13435 895 aaKnown RBP14.01□□□□□ -0.17
H3F3A-202ENST00000366814 RRS1Q15050 365 aaKnown RBP14.01□□□□□ -0.17
H3F3A-202ENST00000366814 BARGINQ6ZT62 677 aa14.01□□□□□ -0.17
H3F3A-202ENST00000366814 TRIM35Q9UPQ4 493 aa14.01□□□□□ -0.17
H3F3A-202ENST00000366814 LMOD3Q0VAK6 560 aa14□□□□□ -0.17
H3F3A-202ENST00000366814 FAM182BQ5T319 152 aa14□□□□□ -0.17
H3F3A-202ENST00000366814 THRAP3Q9Y2W1 955 aaKnown RBP14□□□□□ -0.17
H3F3A-202ENST00000366814 RARSP54136 660 aaKnown RBP13.99□□□□□ -0.17
H3F3A-202ENST00000366814 NFE2L2Q16236 605 aa13.99□□□□□ -0.17
H3F3A-202ENST00000366814 CRB1P82279 1406 aa13.99□□□□□ -0.17
H3F3A-202ENST00000366814 FANCIQ9NVI1 1328 aa13.99□□□□□ -0.17
H3F3A-202ENST00000366814 HMOX1P09601 288 aa13.99□□□□□ -0.17
H3F3A-202ENST00000366814 NFAT5O94916 1531 aa13.99□□□□□ -0.17
H3F3A-202ENST00000366814 MS4A1P11836 297 aa13.98□□□□□ -0.17
H3F3A-202ENST00000366814 DSG3P32926 999 aa13.98□□□□□ -0.17
H3F3A-202ENST00000366814 AAMPQ13685 434 aa13.98□□□□□ -0.17
H3F3A-202ENST00000366814 USP54Q70EL1 1684 aa13.98□□□□□ -0.17
H3F3A-202ENST00000366814 THSD7AQ9UPZ6 1657 aa13.98□□□□□ -0.17
H3F3A-202ENST00000366814 WDR17Q8IZU2 1322 aa13.98□□□□□ -0.17
H3F3A-202ENST00000366814 LTN1O94822 1766 aa13.97□□□□□ -0.17
H3F3A-202ENST00000366814 CENPQQ7L2Z9 268 aaPredicted RBP13.97□□□□□ -0.17
H3F3A-202ENST00000366814 TCERG1O14776 1098 aaKnown RBP13.97□□□□□ -0.17
H3F3A-202ENST00000366814 FRAT1Q92837 279 aaPredicted RBP13.97□□□□□ -0.17
H3F3A-202ENST00000366814 EP400Q96L91 3159 aa13.95□□□□□ -0.18
H3F3A-202ENST00000366814 EXOSC9Q06265 439 aaKnown RBP13.95□□□□□ -0.18
H3F3A-202ENST00000366814 FAM196AQ6ZSG2 479 aa13.95□□□□□ -0.18
H3F3A-202ENST00000366814 TSR2Q969E8 191 aaKnown RBP13.95□□□□□ -0.18
H3F3A-202ENST00000366814 CARD10Q9BWT7 1032 aa13.95□□□□□ -0.18
H3F3A-202ENST00000366814 FLT4P35916 1363 aa13.94□□□□□ -0.18
H3F3A-202ENST00000366814 AMPHP49418 695 aa13.94□□□□□ -0.18
H3F3A-202ENST00000366814 EIF4A2Q14240 407 aaKnown RBP13.94□□□□□ -0.18
H3F3A-202ENST00000366814 DEFB132Q7Z7B7 95 aa13.94□□□□□ -0.18
H3F3A-202ENST00000366814 NLRP2Q9NX02 1062 aa13.94□□□□□ -0.18
H3F3A-202ENST00000366814 GNAI1P63096 354 aa13.93□□□□□ -0.18
H3F3A-202ENST00000366814 ANKRD24Q8TF21 1146 aa13.93□□□□□ -0.18
H3F3A-202ENST00000366814 ZNF428Q96B54 188 aa13.93□□□□□ -0.18
H3F3A-202ENST00000366814 PHACTR3Q96KR7 559 aa13.93□□□□□ -0.18
H3F3A-202ENST00000366814 KIF24Q5T7B8 1368 aa13.93□□□□□ -0.18
H3F3A-202ENST00000366814 PEAK1Q9H792 1746 aa13.93□□□□□ -0.18
H3F3A-202ENST00000366814 DDB1Q16531 1140 aa13.93□□□□□ -0.18
H3F3A-202ENST00000366814 ZKSCAN2Q63HK3 967 aa13.93□□□□□ -0.18
H3F3A-202ENST00000366814 IP6K1Q92551 441 aa13.93□□□□□ -0.18
H3F3A-202ENST00000366814 CDCA7Q9BWT1 371 aaPredicted RBP13.93□□□□□ -0.18
H3F3A-202ENST00000366814 SMC4Q9NTJ3 1288 aa13.93□□□□□ -0.18
H3F3A-202ENST00000366814 ABCC6O95255 1503 aa13.92□□□□□ -0.18
H3F3A-202ENST00000366814 BAG6P46379 1132 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms