RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 DHX37Q8IY37 1157 aaKnown RBP19.56■□□□□ 0.72
NID1-202ENST00000366595 CTAGE5O15320 804 aa19.55■□□□□ 0.72
NID1-202ENST00000366595 CNNM1Q9NRU3 951 aa19.55■□□□□ 0.72
NID1-202ENST00000366595 PLEKHO1Q53GL0 409 aaPredicted RBP19.55■□□□□ 0.72
NID1-202ENST00000366595 HOOK3Q86VS8 718 aa19.55■□□□□ 0.72
NID1-202ENST00000366595 SCAND2PQ9GZW5 306 aaPredicted RBP19.55■□□□□ 0.72
NID1-202ENST00000366595 URI1O94763 535 aaPredicted RBP19.55■□□□□ 0.72
NID1-202ENST00000366595 CCDC183Q5T5S1 534 aa19.55■□□□□ 0.72
NID1-202ENST00000366595 GSTTP1A0A1W2PQM5 241 aa19.54■□□□□ 0.72
NID1-202ENST00000366595 ADAMTS8Q9UP79 889 aa19.54■□□□□ 0.72
NID1-202ENST00000366595 GSDMDP57764 484 aa19.54■□□□□ 0.72
NID1-202ENST00000366595 EXOSC9Q06265 439 aaKnown RBP19.54■□□□□ 0.72
NID1-202ENST00000366595 UBAC1Q9BSL1 405 aa19.54■□□□□ 0.72
NID1-202ENST00000366595 CCDC97Q96F63 343 aaPredicted RBP19.54■□□□□ 0.72
NID1-202ENST00000366595 SSBP05455 408 aaKnown RBP eCLIP19.54■□□□□ 0.72
NID1-202ENST00000366595 SSR1P43307 286 aaKnown RBP19.54■□□□□ 0.72
NID1-202ENST00000366595 CBX1P83916 185 aa19.54■□□□□ 0.72
NID1-202ENST00000366595 TSG101Q99816 390 aa19.54■□□□□ 0.72
NID1-202ENST00000366595 PHAXQ9H814 394 aaKnown RBP19.54■□□□□ 0.72
NID1-202ENST00000366595 PLEKHH1Q9ULM0 1364 aa19.53■□□□□ 0.72
NID1-202ENST00000366595 MPNDQ8N594 471 aa19.53■□□□□ 0.72
NID1-202ENST00000366595 TOP1P11387 765 aaKnown RBP19.53■□□□□ 0.72
NID1-202ENST00000366595 NLRP2Q9NX02 1062 aa19.53■□□□□ 0.72
NID1-202ENST00000366595 NUP133Q8WUM0 1156 aa19.52■□□□□ 0.72
NID1-202ENST00000366595 KIF20AO95235 890 aa19.52■□□□□ 0.72
NID1-202ENST00000366595 CHD1LQ86WJ1 897 aa19.52■□□□□ 0.72
NID1-202ENST00000366595 CFAP57Q96MR6 1250 aa19.52■□□□□ 0.72
NID1-202ENST00000366595 ZNF428Q96B54 188 aa19.52■□□□□ 0.72
NID1-202ENST00000366595 JAKMIP1Q96N16 626 aaKnown RBP19.51■□□□□ 0.71
NID1-202ENST00000366595 BMS1Q14692 1282 aaKnown RBP19.51■□□□□ 0.71
NID1-202ENST00000366595 DDX12PQ92771 950 aa19.51■□□□□ 0.71
NID1-202ENST00000366595 SYCE3A1L190 88 aa19.5■□□□□ 0.71
NID1-202ENST00000366595 WDR63Q8IWG1 891 aa19.5■□□□□ 0.71
NID1-202ENST00000366595 SPECC1Q5M775 1068 aa19.5■□□□□ 0.71
NID1-202ENST00000366595 CACNA2D4Q7Z3S7 1137 aa19.5■□□□□ 0.71
NID1-202ENST00000366595 YEATS4O95619 227 aa19.5■□□□□ 0.71
NID1-202ENST00000366595 NOB1Q9ULX3 412 aaKnown RBP19.5■□□□□ 0.71
NID1-202ENST00000366595 MTHFSP49914 203 aa19.5■□□□□ 0.71
NID1-202ENST00000366595 ALS2CR12Q96Q35 445 aa19.5■□□□□ 0.71
NID1-202ENST00000366595 GGNBP2Q9H3C7 697 aa19.5■□□□□ 0.71
NID1-202ENST00000366595 MVPQ14764 893 aaKnown RBP19.49■□□□□ 0.71
NID1-202ENST00000366595 TNNT1P13805 278 aa19.48■□□□□ 0.71
NID1-202ENST00000366595 CCDC178Q5BJE1 867 aa19.48■□□□□ 0.71
NID1-202ENST00000366595 RPAP2Q8IXW5 612 aaPredicted RBP19.48■□□□□ 0.71
NID1-202ENST00000366595 ATP2B2Q01814 1243 aa19.48■□□□□ 0.71
NID1-202ENST00000366595 LARP1Q6PKG0 1096 aaKnown RBP19.48■□□□□ 0.71
NID1-202ENST00000366595 BBXQ8WY36 941 aaPredicted RBP19.48■□□□□ 0.71
NID1-202ENST00000366595 SMG6Q86US8 1419 aaKnown RBP19.48■□□□□ 0.71
NID1-202ENST00000366595 ATF7IPQ6VMQ6 1270 aa19.48■□□□□ 0.71
NID1-202ENST00000366595 CTR9Q6PD62 1173 aa19.47■□□□□ 0.71
NID1-202ENST00000366595 CLIP2Q9UDT6 1046 aa19.47■□□□□ 0.71
NID1-202ENST00000366595 SH2B1Q9NRF2 756 aaPredicted RBP19.47■□□□□ 0.71
NID1-202ENST00000366595 CAVIN2O95810 425 aa19.47■□□□□ 0.71
NID1-202ENST00000366595 HDGFL1Q5TGJ6 251 aa19.47■□□□□ 0.71
NID1-202ENST00000366595 ZNF76P36508 570 aa19.47■□□□□ 0.71
NID1-202ENST00000366595 MYOM3Q5VTT5 1437 aa19.47■□□□□ 0.71
NID1-202ENST00000366595 DYNC1I1O14576 645 aa19.46■□□□□ 0.71
NID1-202ENST00000366595 GTF2F1P35269 517 aaKnown RBP eCLIP19.46■□□□□ 0.71
NID1-202ENST00000366595 GPATCH11Q8N954 259 aa19.46■□□□□ 0.71
NID1-202ENST00000366595 PRIMPOLQ96LW4 560 aa19.46■□□□□ 0.71
NID1-202ENST00000366595 TIGD1Q96MW7 591 aa19.46■□□□□ 0.71
NID1-202ENST00000366595 PRKAR2BP31323 418 aa19.46■□□□□ 0.71
NID1-202ENST00000366595 DNAAF4Q8WXU2 420 aa19.46■□□□□ 0.71
NID1-202ENST00000366595 TDRD9Q8NDG6 1382 aaKnown RBP19.46■□□□□ 0.71
NID1-202ENST00000366595 FSD2A1L4K1 749 aa19.46■□□□□ 0.71
NID1-202ENST00000366595 PPP2R1AP30153 589 aa19.46■□□□□ 0.71
NID1-202ENST00000366595 UBE4AQ14139 1066 aa19.46■□□□□ 0.71
NID1-202ENST00000366595 MEX3CQ5U5Q3 659 aaKnown RBP19.46■□□□□ 0.71
NID1-202ENST00000366595 CEP112Q8N8E3 955 aa19.46■□□□□ 0.71
NID1-202ENST00000366595 GOPCQ9HD26 462 aa19.46■□□□□ 0.71
NID1-202ENST00000366595 SLC4A2P04920 1241 aa19.46■□□□□ 0.71
NID1-202ENST00000366595 IVLP07476 585 aa19.46■□□□□ 0.71
NID1-202ENST00000366595 TNIP1Q15025 636 aa19.46■□□□□ 0.71
NID1-202ENST00000366595 IPO4Q8TEX9 1081 aaKnown RBP19.46■□□□□ 0.71
NID1-202ENST00000366595 MAPK8IP2Q13387 824 aaPredicted RBP19.45■□□□□ 0.7
NID1-202ENST00000366595 C1orf115Q9H7X2 142 aa19.45■□□□□ 0.7
NID1-202ENST00000366595 CCDC196A0A1B0GTZ2 297 aa19.45■□□□□ 0.7
NID1-202ENST00000366595 MATR3P43243 847 aaKnown RBP eCLIP19.45■□□□□ 0.7
NID1-202ENST00000366595 TDO2P48775 406 aa19.45■□□□□ 0.7
NID1-202ENST00000366595 GRIPAP1Q4V328 841 aa19.45■□□□□ 0.7
NID1-202ENST00000366595 EHBP1Q8NDI1 1231 aa19.45■□□□□ 0.7
NID1-202ENST00000366595 RAB34Q9BZG1 259 aa19.45■□□□□ 0.7
NID1-202ENST00000366595 CCDC88BA6NC98 1476 aa19.45■□□□□ 0.7
NID1-202ENST00000366595 MPHOSPH10O00566 681 aaKnown RBP19.45■□□□□ 0.7
NID1-202ENST00000366595 ZNF287Q9HBT7 754 aa19.45■□□□□ 0.7
NID1-202ENST00000366595 DDX19AQ9NUU7 478 aaKnown RBP19.45■□□□□ 0.7
NID1-202ENST00000366595 HSPA4P34932 840 aa19.44■□□□□ 0.7
NID1-202ENST00000366595 PAXBP1Q9Y5B6 917 aa19.44■□□□□ 0.7
NID1-202ENST00000366595 RAI14Q9P0K7 980 aa19.44■□□□□ 0.7
NID1-202ENST00000366595 MNAT1P51948 309 aa19.44■□□□□ 0.7
NID1-202ENST00000366595 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.44■□□□□ 0.72e-7■□□□□ 10.4
NID1-202ENST00000366595 V9GYY5 206 aaPredicted RBP19.44■□□□□ 0.7
NID1-202ENST00000366595 FERP16591 822 aa19.44■□□□□ 0.7
NID1-202ENST00000366595 PRKCSHP14314 528 aaPredicted RBP19.43■□□□□ 0.7
NID1-202ENST00000366595 AEBP2Q6ZN18 517 aaPredicted RBP19.43■□□□□ 0.7
NID1-202ENST00000366595 NLRP6P59044 892 aa19.43■□□□□ 0.7
NID1-202ENST00000366595 AACSQ86V21 672 aa19.43■□□□□ 0.7
NID1-202ENST00000366595 BCCIPQ9P287 314 aaKnown RBP eCLIP19.43■□□□□ 0.7
NID1-202ENST00000366595 CDCA7LQ96GN5 454 aa19.43■□□□□ 0.7
NID1-202ENST00000366595 FBF1Q8TES7 1133 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms