RNA–Protein interactions for RNA: ENST00000364447.1

RNU4-59P-201, Transcript of RNA, U4 small nuclear 59, pseudogene, humanhuman

BASIC

Gene RNU4-59P, Length 116 nt, Biotype snRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-59P-201ENST00000364447 ZCRB1Q8TBF4 217 aaKnown RBP11.39□□□□□ -0.59
RNU4-59P-201ENST00000364447 TUBGCP6Q96RT7 1819 aa11.38□□□□□ -0.59
RNU4-59P-201ENST00000364447 PRIM1P49642 420 aaKnown RBP11.38□□□□□ -0.59
RNU4-59P-201ENST00000364447 RAPGEF4Q8WZA2 1011 aa11.38□□□□□ -0.59
RNU4-59P-201ENST00000364447 LRRC4BQ9NT99 713 aa11.38□□□□□ -0.59
RNU4-59P-201ENST00000364447 FLT4P35916 1363 aa11.38□□□□□ -0.59
RNU4-59P-201ENST00000364447 CGNL1Q0VF96 1302 aa11.37□□□□□ -0.59
RNU4-59P-201ENST00000364447 NSD3Q9BZ95 1437 aa11.37□□□□□ -0.59
RNU4-59P-201ENST00000364447 ZNF827Q17R98 1081 aa11.37□□□□□ -0.59
RNU4-59P-201ENST00000364447 NBPF6Q5VWK0 638 aa11.37□□□□□ -0.59
RNU4-59P-201ENST00000364447 USHBP1Q8N6Y0 703 aa11.37□□□□□ -0.59
RNU4-59P-201ENST00000364447 NBPF4Q96M43 638 aa11.37□□□□□ -0.59
RNU4-59P-201ENST00000364447 FHDC1Q9C0D6 1143 aaPredicted RBP11.37□□□□□ -0.59
RNU4-59P-201ENST00000364447 TIMELESSQ9UNS1 1208 aa11.37□□□□□ -0.59
RNU4-59P-201ENST00000364447 INSRP06213 1382 aa11.37□□□□□ -0.59
RNU4-59P-201ENST00000364447 TATP17735 454 aaPredicted RBP11.36□□□□□ -0.59
RNU4-59P-201ENST00000364447 KIF24Q5T7B8 1368 aa11.36□□□□□ -0.59
RNU4-59P-201ENST00000364447 ANKRD26Q9UPS8 1709 aa11.35□□□□□ -0.59
RNU4-59P-201ENST00000364447 AKT1S1Q96B36 256 aa11.35□□□□□ -0.59
RNU4-59P-201ENST00000364447 ARXQ96QS3 562 aa11.35□□□□□ -0.59
RNU4-59P-201ENST00000364447 SGIP1Q9BQI5 828 aa11.35□□□□□ -0.59
RNU4-59P-201ENST00000364447 PCGF6Q9BYE7 350 aa11.35□□□□□ -0.59
RNU4-59P-201ENST00000364447 TFCP2L1Q9NZI6 479 aa11.35□□□□□ -0.59
RNU4-59P-201ENST00000364447 NSD2O96028 1365 aa11.35□□□□□ -0.59
RNU4-59P-201ENST00000364447 PCDH11XQ9BZA7 1347 aa11.35□□□□□ -0.59
RNU4-59P-201ENST00000364447 PCDH11YQ9BZA8 1340 aa11.35□□□□□ -0.59
RNU4-59P-201ENST00000364447 CLSPNQ9HAW4 1339 aa11.35□□□□□ -0.59
RNU4-59P-201ENST00000364447 KCNQ4P56696 695 aa11.34□□□□□ -0.59
RNU4-59P-201ENST00000364447 HSP90AB2PQ58FF8 381 aa11.34□□□□□ -0.59
RNU4-59P-201ENST00000364447 SYT17Q9BSW7 474 aa11.34□□□□□ -0.59
RNU4-59P-201ENST00000364447 CARD14Q9BXL6 1004 aa11.34□□□□□ -0.59
RNU4-59P-201ENST00000364447 CCNL1Q9UK58 526 aaPredicted RBP11.34□□□□□ -0.59
RNU4-59P-201ENST00000364447 MAP2P11137 1827 aaKnown RBP11.34□□□□□ -0.59
RNU4-59P-201ENST00000364447 PKD1L3Q7Z443 1732 aa11.34□□□□□ -0.59
RNU4-59P-201ENST00000364447 C5P01031 1676 aa11.33□□□□□ -0.6
RNU4-59P-201ENST00000364447 CHD4Q14839 1912 aa11.33□□□□□ -0.6
RNU4-59P-201ENST00000364447 PPM1GO15355 546 aaPredicted RBP11.33□□□□□ -0.6
RNU4-59P-201ENST00000364447 POLD1P28340 1107 aa11.33□□□□□ -0.6
RNU4-59P-201ENST00000364447 SLC16A10Q8TF71 515 aa11.33□□□□□ -0.6
RNU4-59P-201ENST00000364447 POLR3GLQ9BT43 218 aa11.33□□□□□ -0.6
RNU4-59P-201ENST00000364447 EMILIN1Q9Y6C2 1016 aa11.33□□□□□ -0.6
RNU4-59P-201ENST00000364447 PNPLA7Q6ZV29 1317 aa11.33□□□□□ -0.6
RNU4-59P-201ENST00000364447 ITGB4P16144 1822 aa11.32□□□□□ -0.6
RNU4-59P-201ENST00000364447 COL24A1Q17RW2 1714 aa11.32□□□□□ -0.6
RNU4-59P-201ENST00000364447 KLHL34Q8N239 644 aa11.32□□□□□ -0.6
RNU4-59P-201ENST00000364447 TOGARAM1Q9Y4F4 1720 aa11.32□□□□□ -0.6
RNU4-59P-201ENST00000364447 MAP3K5Q99683 1374 aa11.31□□□□□ -0.6
RNU4-59P-201ENST00000364447 TAF1LQ8IZX4 1826 aa11.31□□□□□ -0.6
RNU4-59P-201ENST00000364447 MSH5O43196 834 aa11.31□□□□□ -0.6
RNU4-59P-201ENST00000364447 PALLDQ8WX93 1383 aa11.29□□□□□ -0.6
RNU4-59P-201ENST00000364447 NCAPD2Q15021 1401 aa11.29□□□□□ -0.6
RNU4-59P-201ENST00000364447 HMGB2P26583 209 aaKnown RBP11.29□□□□□ -0.6
RNU4-59P-201ENST00000364447 MPRIPQ6WCQ1 1025 aa11.29□□□□□ -0.6
RNU4-59P-201ENST00000364447 SPG7Q9UQ90 795 aa11.29□□□□□ -0.6
RNU4-59P-201ENST00000364447 CYP27B1O15528 508 aa11.28□□□□□ -0.6
RNU4-59P-201ENST00000364447 EIF4G2P78344 907 aaKnown RBP eCLIP11.28□□□□□ -0.6
RNU4-59P-201ENST00000364447 GPR162Q16538 588 aa11.28□□□□□ -0.6
RNU4-59P-201ENST00000364447 WASHC2AQ641Q2 1341 aa11.28□□□□□ -0.6
RNU4-59P-201ENST00000364447 C4BP0C0L5 1744 aa11.27□□□□□ -0.61
RNU4-59P-201ENST00000364447 TNNT2P45379 298 aaPredicted RBP11.27□□□□□ -0.61
RNU4-59P-201ENST00000364447 PELP1Q8IZL8 1130 aaKnown RBP11.27□□□□□ -0.61
RNU4-59P-201ENST00000364447 SMARCC1Q92922 1105 aaPredicted RBP11.27□□□□□ -0.61
RNU4-59P-201ENST00000364447 COL23A1Q86Y22 540 aaPredicted RBP11.26□□□□□ -0.61
RNU4-59P-201ENST00000364447 CCER1Q8TC90 406 aaPredicted RBP11.26□□□□□ -0.61
RNU4-59P-201ENST00000364447 EYA1Q99502 592 aa11.26□□□□□ -0.61
RNU4-59P-201ENST00000364447 POLKQ9UBT6 870 aa11.26□□□□□ -0.61
RNU4-59P-201ENST00000364447 HSPA5P11021 654 aaKnown RBP11.25□□□□□ -0.61
RNU4-59P-201ENST00000364447 MSL1Q68DK7 614 aa11.25□□□□□ -0.61
RNU4-59P-201ENST00000364447 FLAD1Q8NFF5 587 aa11.25□□□□□ -0.61
RNU4-59P-201ENST00000364447 AK7Q96M32 723 aa11.25□□□□□ -0.61
RNU4-59P-201ENST00000364447 UBR3Q6ZT12 1888 aa11.25□□□□□ -0.61
RNU4-59P-201ENST00000364447 ZNF784Q8NCA9 323 aaPredicted RBP11.24□□□□□ -0.61
RNU4-59P-201ENST00000364447 PIGBQ92521 554 aa11.24□□□□□ -0.61
RNU4-59P-201ENST00000364447 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.24□□□□□ -0.61
RNU4-59P-201ENST00000364447 TMOD3Q9NYL9 352 aa11.24□□□□□ -0.61
RNU4-59P-201ENST00000364447 EIF4A2Q14240 407 aaKnown RBP11.23□□□□□ -0.61
RNU4-59P-201ENST00000364447 NKX1-1Q15270 411 aaPredicted RBP11.23□□□□□ -0.61
RNU4-59P-201ENST00000364447 IFNL2Q8IZJ0 200 aa11.23□□□□□ -0.61
RNU4-59P-201ENST00000364447 NLGN2Q8NFZ4 835 aa11.23□□□□□ -0.61
RNU4-59P-201ENST00000364447 PHF14O94880 888 aa11.22□□□□□ -0.61
RNU4-59P-201ENST00000364447 PHKG2P15735 406 aa11.22□□□□□ -0.61
RNU4-59P-201ENST00000364447 PLEKHG2Q9H7P9 1386 aa11.22□□□□□ -0.61
RNU4-59P-201ENST00000364447 PANK3Q9H999 370 aa11.22□□□□□ -0.61
RNU4-59P-201ENST00000364447 LOC102724428A0A0B4J2F2 783 aa11.21□□□□□ -0.61
RNU4-59P-201ENST00000364447 SIK1P57059 783 aa11.21□□□□□ -0.61
RNU4-59P-201ENST00000364447 IGSF1Q8N6C5 1336 aa11.2□□□□□ -0.62
RNU4-59P-201ENST00000364447 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.2□□□□□ -0.62
RNU4-59P-201ENST00000364447 MORC1Q86VD1 984 aa11.2□□□□□ -0.62
RNU4-59P-201ENST00000364447 ASAP1Q9ULH1 1129 aa11.2□□□□□ -0.62
RNU4-59P-201ENST00000364447 GRIN3BO60391 1043 aa11.19□□□□□ -0.62
RNU4-59P-201ENST00000364447 SSFA2P28290 1259 aa11.19□□□□□ -0.62
RNU4-59P-201ENST00000364447 ATP6V1AP38606 617 aa11.19□□□□□ -0.62
RNU4-59P-201ENST00000364447 LINC00116Q8NCU8 138 aa11.19□□□□□ -0.62
RNU4-59P-201ENST00000364447 KNSTRNQ9Y448 316 aa11.19□□□□□ -0.62
RNU4-59P-201ENST00000364447 ZNF831Q5JPB2 1677 aa11.18□□□□□ -0.62
RNU4-59P-201ENST00000364447 GNPATO15228 680 aa11.18□□□□□ -0.62
RNU4-59P-201ENST00000364447 HSP90AB1P08238 724 aaKnown RBP11.18□□□□□ -0.62
RNU4-59P-201ENST00000364447 PLEKHO1Q53GL0 409 aaPredicted RBP11.18□□□□□ -0.62
RNU4-59P-201ENST00000364447 CD2APQ9Y5K6 639 aa11.18□□□□□ -0.62
RNU4-59P-201ENST00000364447 UTRNP46939 3433 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms