RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 SIRT1Q96EB6 747 aa9.8□□□□□ -0.84
RNU4-39P-201ENST00000362455 SLAIN2Q9P270 581 aa9.8□□□□□ -0.84
RNU4-39P-201ENST00000362455 RC3H1Q5TC82 1133 aaKnown RBP9.79□□□□□ -0.84
RNU4-39P-201ENST00000362455 CLP1Q92989 425 aaKnown RBP9.79□□□□□ -0.84
RNU4-39P-201ENST00000362455 PCDHGA11Q9Y5H2 935 aa9.79□□□□□ -0.84
RNU4-39P-201ENST00000362455 CD2BP2O95400 341 aaKnown RBP9.78□□□□□ -0.84
RNU4-39P-201ENST00000362455 PSME1Q06323 249 aa9.78□□□□□ -0.84
RNU4-39P-201ENST00000362455 ARID5BQ14865 1188 aa9.78□□□□□ -0.84
RNU4-39P-201ENST00000362455 PHLDB3Q6NSJ2 640 aa9.78□□□□□ -0.84
RNU4-39P-201ENST00000362455 LIAT1Q6ZQX7 453 aa9.78□□□□□ -0.84
RNU4-39P-201ENST00000362455 ERVH48-1M5A8F1 160 aa9.77□□□□□ -0.85
RNU4-39P-201ENST00000362455 SSFA2P28290 1259 aa9.77□□□□□ -0.85
RNU4-39P-201ENST00000362455 SWI5Q1ZZU3 235 aa9.77□□□□□ -0.85
RNU4-39P-201ENST00000362455 CCDC102BQ68D86 513 aa9.77□□□□□ -0.85
RNU4-39P-201ENST00000362455 TPCN2Q8NHX9 752 aa9.77□□□□□ -0.85
RNU4-39P-201ENST00000362455 MYCP01106 439 aaPredicted RBP9.76□□□□□ -0.85
RNU4-39P-201ENST00000362455 SCTRP47872 440 aa9.76□□□□□ -0.85
RNU4-39P-201ENST00000362455 SEC13P55735 322 aa9.76□□□□□ -0.85
RNU4-39P-201ENST00000362455 EMID1Q96A84 441 aaPredicted RBP9.76□□□□□ -0.85
RNU4-39P-201ENST00000362455 CDK15Q96Q40 435 aa9.76□□□□□ -0.85
RNU4-39P-201ENST00000362455 RBM19Q9Y4C8 960 aaKnown RBP9.76□□□□□ -0.85
RNU4-39P-201ENST00000362455 SFI1A8K8P3 1242 aa9.75□□□□□ -0.85
RNU4-39P-201ENST00000362455 ATP2B4P23634 1241 aa9.75□□□□□ -0.85
RNU4-39P-201ENST00000362455 SLC19A1P41440 591 aa9.75□□□□□ -0.85
RNU4-39P-201ENST00000362455 GNEQ9Y223 722 aaKnown RBP9.75□□□□□ -0.85
RNU4-39P-201ENST00000362455 TLL2Q9Y6L7 1015 aa9.75□□□□□ -0.85
RNU4-39P-201ENST00000362455 FSHRP23945 695 aa9.74□□□□□ -0.85
RNU4-39P-201ENST00000362455 MFAP1P55081 439 aaKnown RBP9.74□□□□□ -0.85
RNU4-39P-201ENST00000362455 BICRAQ9NZM4 1560 aa9.74□□□□□ -0.85
RNU4-39P-201ENST00000362455 GRM5P41594 1212 aa9.73□□□□□ -0.85
RNU4-39P-201ENST00000362455 TXNDC2Q86VQ3 553 aa9.73□□□□□ -0.85
RNU4-39P-201ENST00000362455 SIAH2O43255 324 aa9.72□□□□□ -0.85
RNU4-39P-201ENST00000362455 ERVK-9P63128 1117 aa9.72□□□□□ -0.85
RNU4-39P-201ENST00000362455 MPNDQ8N594 471 aa9.72□□□□□ -0.85
RNU4-39P-201ENST00000362455 CCER1Q8TC90 406 aaPredicted RBP9.72□□□□□ -0.85
RNU4-39P-201ENST00000362455 TMPRSS4Q9NRS4 437 aa9.72□□□□□ -0.85
RNU4-39P-201ENST00000362455 PRMT3O60678 531 aa9.71□□□□□ -0.86
RNU4-39P-201ENST00000362455 CC2D2BQ6DHV5 1058 aa9.71□□□□□ -0.86
RNU4-39P-201ENST00000362455 ESF1Q9H501 851 aaKnown RBP9.71□□□□□ -0.86
RNU4-39P-201ENST00000362455 CYLDQ9NQC7 956 aa9.71□□□□□ -0.86
RNU4-39P-201ENST00000362455 ADH1CP00326 375 aa9.7□□□□□ -0.86
RNU4-39P-201ENST00000362455 ARID4AP29374 1257 aaPredicted RBP9.7□□□□□ -0.86
RNU4-39P-201ENST00000362455 DHX9Q08211 1270 aaKnown RBP9.7□□□□□ -0.86
RNU4-39P-201ENST00000362455 SND1Q7KZF4 910 aaKnown RBP eCLIP9.7□□□□□ -0.86
RNU4-39P-201ENST00000362455 V9GY48 417 aaPredicted RBP9.7□□□□□ -0.86
RNU4-39P-201ENST00000362455 WNT7AO00755 349 aa9.69□□□□□ -0.86
RNU4-39P-201ENST00000362455 OCLNQ16625 522 aa9.69□□□□□ -0.86
RNU4-39P-201ENST00000362455 SPRYD7Q5W111 196 aa9.69□□□□□ -0.86
RNU4-39P-201ENST00000362455 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.69□□□□□ -0.86
RNU4-39P-201ENST00000362455 ZNF784Q8NCA9 323 aaPredicted RBP9.69□□□□□ -0.86
RNU4-39P-201ENST00000362455 MRGPRX2Q96LB1 330 aa9.69□□□□□ -0.86
RNU4-39P-201ENST00000362455 PRIMPOLQ96LW4 560 aa9.69□□□□□ -0.86
RNU4-39P-201ENST00000362455 HINFPQ9BQA5 517 aa9.69□□□□□ -0.86
RNU4-39P-201ENST00000362455 PRKD2Q9BZL6 878 aa9.69□□□□□ -0.86
RNU4-39P-201ENST00000362455 OSBPL3Q9H4L5 887 aa9.69□□□□□ -0.86
RNU4-39P-201ENST00000362455 MYO15BQ96JP2 1530 aa9.68□□□□□ -0.86
RNU4-39P-201ENST00000362455 LGR5O75473 907 aa9.68□□□□□ -0.86
RNU4-39P-201ENST00000362455 SCNN1AP37088 669 aa9.68□□□□□ -0.86
RNU4-39P-201ENST00000362455 CCDC116Q8IYX3 515 aa9.68□□□□□ -0.86
RNU4-39P-201ENST00000362455 TSEN2Q8NCE0 465 aaKnown RBP9.68□□□□□ -0.86
RNU4-39P-201ENST00000362455 CXXC1Q9P0U4 656 aaPredicted RBP9.68□□□□□ -0.86
RNU4-39P-201ENST00000362455 M0R2N6 131 aa9.67□□□□□ -0.86
RNU4-39P-201ENST00000362455 NR5A1Q13285 461 aa9.67□□□□□ -0.86
RNU4-39P-201ENST00000362455 PPP1R26Q5T8A7 1209 aaPredicted RBP9.67□□□□□ -0.86
RNU4-39P-201ENST00000362455 RGS22Q8NE09 1264 aa9.67□□□□□ -0.86
RNU4-39P-201ENST00000362455 C1orf216Q8TAB5 229 aa9.67□□□□□ -0.86
RNU4-39P-201ENST00000362455 ZNF358Q9NW07 568 aa9.67□□□□□ -0.86
RNU4-39P-201ENST00000362455 TMEM229AB2RXF0 380 aa9.66□□□□□ -0.86
RNU4-39P-201ENST00000362455 STAU1O95793 577 aaKnown RBP9.66□□□□□ -0.86
RNU4-39P-201ENST00000362455 NR3C2P08235 984 aa9.66□□□□□ -0.86
RNU4-39P-201ENST00000362455 NPM2Q86SE8 214 aaKnown RBP9.66□□□□□ -0.86
RNU4-39P-201ENST00000362455 ZNF598Q86UK7 904 aaKnown RBP9.66□□□□□ -0.86
RNU4-39P-201ENST00000362455 TRIM52Q96A61 297 aa9.66□□□□□ -0.86
RNU4-39P-201ENST00000362455 MTMR7Q9Y216 660 aa9.66□□□□□ -0.86
RNU4-39P-201ENST00000362455 LILRA1O75019 489 aa9.65□□□□□ -0.86
RNU4-39P-201ENST00000362455 SERPINB4P48594 390 aa9.65□□□□□ -0.86
RNU4-39P-201ENST00000362455 SCNN1DP51172 638 aa9.65□□□□□ -0.86
RNU4-39P-201ENST00000362455 MYT1Q01538 1121 aa9.65□□□□□ -0.86
RNU4-39P-201ENST00000362455 CCDC27Q2M243 656 aa9.65□□□□□ -0.86
RNU4-39P-201ENST00000362455 ZNF697Q5TEC3 545 aa9.65□□□□□ -0.86
RNU4-39P-201ENST00000362455 RGS20O76081 388 aa9.64□□□□□ -0.87
RNU4-39P-201ENST00000362455 GDF10P55107 478 aa9.64□□□□□ -0.87
RNU4-39P-201ENST00000362455 WEE1P30291 646 aa9.63□□□□□ -0.87
RNU4-39P-201ENST00000362455 TAS1R3Q7RTX0 852 aa9.63□□□□□ -0.87
RNU4-39P-201ENST00000362455 WASLO00401 505 aaPredicted RBP9.62□□□□□ -0.87
RNU4-39P-201ENST00000362455 ADD1P35611 737 aaKnown RBP9.62□□□□□ -0.87
RNU4-39P-201ENST00000362455 CYP2U1Q7Z449 544 aa9.62□□□□□ -0.87
RNU4-39P-201ENST00000362455 ETNK1Q9HBU6 452 aa9.62□□□□□ -0.87
RNU4-39P-201ENST00000362455 PGPEP1Q9NXJ5 209 aa9.62□□□□□ -0.87
RNU4-39P-201ENST00000362455 SOWAHDA6NJG2 315 aa9.61□□□□□ -0.87
RNU4-39P-201ENST00000362455 BACH1O14867 736 aa9.61□□□□□ -0.87
RNU4-39P-201ENST00000362455 ALDH1A1P00352 501 aa9.61□□□□□ -0.87
RNU4-39P-201ENST00000362455 INHAP05111 366 aa9.61□□□□□ -0.87
RNU4-39P-201ENST00000362455 FOXC1Q12948 553 aa9.61□□□□□ -0.87
RNU4-39P-201ENST00000362455 SERTAD1Q9UHV2 236 aa9.61□□□□□ -0.87
RNU4-39P-201ENST00000362455 EMILIN1Q9Y6C2 1016 aa9.61□□□□□ -0.87
RNU4-39P-201ENST00000362455 UNC13AQ9UPW8 1703 aa9.61□□□□□ -0.87
RNU4-39P-201ENST00000362455 NNTQ13423 1086 aa9.6□□□□□ -0.87
RNU4-39P-201ENST00000362455 FKBP5Q13451 457 aaPredicted RBP9.6□□□□□ -0.87
RNU4-39P-201ENST00000362455 TNS4Q8IZW8 715 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms