RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 MIS18AQ9NYP9 233 aa15.4■□□□□ 0.06
VAMP1-201ENST00000361716 NEURL4Q96JN8 1562 aa15.39■□□□□ 0.05
VAMP1-201ENST00000361716 RRS1Q15050 365 aaKnown RBP15.39■□□□□ 0.05
VAMP1-201ENST00000361716 ZNF428Q96B54 188 aa15.39■□□□□ 0.05
VAMP1-201ENST00000361716 RICTORQ6R327 1708 aa15.39■□□□□ 0.05
VAMP1-201ENST00000361716 KIF20AO95235 890 aa15.39■□□□□ 0.05
VAMP1-201ENST00000361716 TWISTNBQ3B726 338 aaPredicted RBP15.39■□□□□ 0.05
VAMP1-201ENST00000361716 PHACTR3Q96KR7 559 aa15.39■□□□□ 0.05
VAMP1-201ENST00000361716 TRPM2O94759 1503 aa15.39■□□□□ 0.05
VAMP1-201ENST00000361716 RIOK3O14730 519 aaKnown RBP15.39■□□□□ 0.05
VAMP1-201ENST00000361716 PTPRTO14522 1441 aa15.38■□□□□ 0.05
VAMP1-201ENST00000361716 NCOA3Q9Y6Q9 1424 aa15.38■□□□□ 0.05
VAMP1-201ENST00000361716 CCDC27Q2M243 656 aa15.38■□□□□ 0.05
VAMP1-201ENST00000361716 PRIMPOLQ96LW4 560 aa15.38■□□□□ 0.05
VAMP1-201ENST00000361716 LARP6Q9BRS8 491 aaKnown RBP15.38■□□□□ 0.05
VAMP1-201ENST00000361716 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.37■□□□□ 0.05
VAMP1-201ENST00000361716 GADD45BO75293 160 aaPredicted RBP15.37■□□□□ 0.05
VAMP1-201ENST00000361716 MBD3O95983 291 aa15.37■□□□□ 0.05
VAMP1-201ENST00000361716 EMILIN1Q9Y6C2 1016 aa15.37■□□□□ 0.05
VAMP1-201ENST00000361716 VIRMAQ69YN4 1812 aaKnown RBP15.37■□□□□ 0.05
VAMP1-201ENST00000361716 MLH3Q9UHC1 1453 aa15.37■□□□□ 0.05
VAMP1-201ENST00000361716 ABCA6Q8N139 1617 aa15.36■□□□□ 0.05
VAMP1-201ENST00000361716 LMTK2Q8IWU2 1503 aa15.36■□□□□ 0.05
VAMP1-201ENST00000361716 PPRC1Q5VV67 1664 aaKnown RBP15.36■□□□□ 0.05
VAMP1-201ENST00000361716 ZRANB1Q9UGI0 708 aa15.36■□□□□ 0.05
VAMP1-201ENST00000361716 HECW2Q9P2P5 1572 aa15.36■□□□□ 0.05
VAMP1-201ENST00000361716 FYB1O15117 783 aa15.36■□□□□ 0.05
VAMP1-201ENST00000361716 VGFO15240 615 aaPredicted RBP15.36■□□□□ 0.05
VAMP1-201ENST00000361716 PDIA4P13667 645 aaKnown RBP15.36■□□□□ 0.05
VAMP1-201ENST00000361716 WAPLQ7Z5K2 1190 aa15.35■□□□□ 0.05
VAMP1-201ENST00000361716 AEBP1Q8IUX7 1158 aa15.35■□□□□ 0.05
VAMP1-201ENST00000361716 PIBF1Q8WXW3 757 aa15.35■□□□□ 0.05
VAMP1-201ENST00000361716 C16orf45Q96MC5 204 aaPredicted RBP15.35■□□□□ 0.05
VAMP1-201ENST00000361716 DIAPH3Q9NSV4 1193 aa15.35■□□□□ 0.05
VAMP1-201ENST00000361716 IFT57Q9NWB7 429 aa15.35■□□□□ 0.05
VAMP1-201ENST00000361716 CLTCL1P53675 1640 aa15.35■□□□□ 0.05
VAMP1-201ENST00000361716 INTS3Q68E01 1043 aaKnown RBP15.35■□□□□ 0.05
VAMP1-201ENST00000361716 UPF3BQ9BZI7 483 aaKnown RBP15.35■□□□□ 0.05
VAMP1-201ENST00000361716 CWC22Q9HCG8 908 aaKnown RBP15.35■□□□□ 0.05
VAMP1-201ENST00000361716 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.35■□□□□ 0.05
VAMP1-201ENST00000361716 ZDHHC9Q9Y397 364 aa15.35■□□□□ 0.05
VAMP1-201ENST00000361716 V9GYY5 206 aaPredicted RBP15.35■□□□□ 0.05
VAMP1-201ENST00000361716 AEBP2Q6ZN18 517 aaPredicted RBP15.34■□□□□ 0.05
VAMP1-201ENST00000361716 ANO2Q9NQ90 1003 aa15.34■□□□□ 0.05
VAMP1-201ENST00000361716 IBTKQ9P2D0 1353 aaPredicted RBP15.34■□□□□ 0.05
VAMP1-201ENST00000361716 NEO1Q92859 1461 aa15.34■□□□□ 0.05
VAMP1-201ENST00000361716 FIBPO43427 364 aa15.34■□□□□ 0.05
VAMP1-201ENST00000361716 NAA30Q147X3 362 aaPredicted RBP15.34■□□□□ 0.05
VAMP1-201ENST00000361716 GSPT1P15170 499 aaKnown RBP15.34■□□□□ 0.05
VAMP1-201ENST00000361716 ERVK-7P63135 1459 aa15.34■□□□□ 0.05
VAMP1-201ENST00000361716 PHF14O94880 888 aa15.33■□□□□ 0.05
VAMP1-201ENST00000361716 C8orf58Q8NAV2 365 aa15.33■□□□□ 0.05
VAMP1-201ENST00000361716 IFT172Q9UG01 1749 aa15.33■□□□□ 0.04
VAMP1-201ENST00000361716 GCC1Q96CN9 775 aa15.33■□□□□ 0.04
VAMP1-201ENST00000361716 MAP4K4O95819 1239 aaPredicted RBP15.33■□□□□ 0.04
VAMP1-201ENST00000361716 CERS3Q8IU89 383 aa15.33■□□□□ 0.04
VAMP1-201ENST00000361716 CDK19Q9BWU1 502 aa15.32■□□□□ 0.04
VAMP1-201ENST00000361716 C14orf93Q9H972 538 aaKnown RBP15.32■□□□□ 0.04
VAMP1-201ENST00000361716 TMEM51Q9NW97 253 aa15.32■□□□□ 0.04
VAMP1-201ENST00000361716 NPATQ14207 1427 aa15.32■□□□□ 0.04
VAMP1-201ENST00000361716 ZMYM3Q14202 1370 aa15.32■□□□□ 0.04
VAMP1-201ENST00000361716 F6X3S4 739 aa15.32■□□□□ 0.04
VAMP1-201ENST00000361716 EXOC6BQ9Y2D4 811 aa15.32■□□□□ 0.04
VAMP1-201ENST00000361716 DIP2BQ9P265 1576 aa15.32■□□□□ 0.04
VAMP1-201ENST00000361716 EFCAB6Q5THR3 1501 aa15.32■□□□□ 0.04
VAMP1-201ENST00000361716 GIMAP6Q6P9H5 292 aa15.31■□□□□ 0.04
VAMP1-201ENST00000361716 USP26Q9BXU7 913 aa15.31■□□□□ 0.04
VAMP1-201ENST00000361716 TAOK2Q9UL54 1235 aa15.31■□□□□ 0.04
VAMP1-201ENST00000361716 MCM10Q7L590 875 aa15.31■□□□□ 0.04
VAMP1-201ENST00000361716 MBIPQ9NS73 344 aa15.31■□□□□ 0.04
VAMP1-201ENST00000361716 PYCARDQ9ULZ3 195 aa15.31■□□□□ 0.04
VAMP1-201ENST00000361716 MADDQ8WXG6 1647 aa15.31■□□□□ 0.04
VAMP1-201ENST00000361716 USP48Q86UV5 1035 aa15.31■□□□□ 0.04
VAMP1-201ENST00000361716 TMX3Q96JJ7 454 aa15.31■□□□□ 0.04
VAMP1-201ENST00000361716 ZBTB7BO15156 539 aaPredicted RBP15.3■□□□□ 0.04
VAMP1-201ENST00000361716 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.3■□□□□ 0.04
VAMP1-201ENST00000361716 GNAI1P63096 354 aa15.3■□□□□ 0.04
VAMP1-201ENST00000361716 PAXIP1Q6ZW49 1069 aaPredicted RBP15.3■□□□□ 0.04
VAMP1-201ENST00000361716 NPC1L1Q9UHC9 1359 aa15.3■□□□□ 0.04
VAMP1-201ENST00000361716 NCKAP5LQ9HCH0 1330 aa15.29■□□□□ 0.04
VAMP1-201ENST00000361716 C14orf37Q86TY3 774 aa15.29■□□□□ 0.04
VAMP1-201ENST00000361716 NME9Q86XW9 330 aa15.29■□□□□ 0.04
VAMP1-201ENST00000361716 DIP2CQ9Y2E4 1556 aa15.29■□□□□ 0.04
VAMP1-201ENST00000361716 REC8O95072 547 aa15.29■□□□□ 0.04
VAMP1-201ENST00000361716 SDSP20132 328 aa15.29■□□□□ 0.04
VAMP1-201ENST00000361716 PLEKHM2Q8IWE5 1019 aa15.29■□□□□ 0.04
VAMP1-201ENST00000361716 DDX54Q8TDD1 881 aaKnown RBP15.29■□□□□ 0.04
VAMP1-201ENST00000361716 VAMP4O75379 141 aa15.28■□□□□ 0.04
VAMP1-201ENST00000361716 API5Q9BZZ5 524 aaKnown RBP15.28■□□□□ 0.04
VAMP1-201ENST00000361716 SIRT2Q8IXJ6 389 aa15.27■□□□□ 0.04
VAMP1-201ENST00000361716 SLC4A2P04920 1241 aa15.27■□□□□ 0.04
VAMP1-201ENST00000361716 CNPY2Q9Y2B0 182 aa15.27■□□□□ 0.04
VAMP1-201ENST00000361716 CT47B1P0C2W7 299 aaPredicted RBP15.27■□□□□ 0.03
VAMP1-201ENST00000361716 CLEC17AQ6ZS10 378 aa15.27■□□□□ 0.03
VAMP1-201ENST00000361716 RTF1Q92541 710 aaKnown RBP15.27■□□□□ 0.03
VAMP1-201ENST00000361716 ZBTB9Q96C00 473 aa15.27■□□□□ 0.03
VAMP1-201ENST00000361716 LTV1Q96GA3 475 aaPredicted RBP15.27■□□□□ 0.03
VAMP1-201ENST00000361716 SULT6B1Q6IMI4 303 aa15.26■□□□□ 0.03
VAMP1-201ENST00000361716 MROH2AA6NES4 1674 aa15.26■□□□□ 0.03
VAMP1-201ENST00000361716 A0A1W2PP64 1363 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 276 ms