RNA–Protein interactions for RNA: ENST00000360453.8

PPARGC1B-202, Transcript of PPARG coactivator 1 beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPARGC1B, Length 3,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-202ENST00000360453 ZSCAN23Q3MJ62 389 aa16.56■□□□□ 0.24
PPARGC1B-202ENST00000360453 INTS3Q68E01 1043 aaKnown RBP16.56■□□□□ 0.24
PPARGC1B-202ENST00000360453 RBSNQ9H1K0 784 aa16.56■□□□□ 0.24
PPARGC1B-202ENST00000360453 EIF4A2Q14240 407 aaKnown RBP16.56■□□□□ 0.24
PPARGC1B-202ENST00000360453 KLHL40Q2TBA0 621 aa16.56■□□□□ 0.24
PPARGC1B-202ENST00000360453 ANKRD44Q8N8A2 993 aa16.56■□□□□ 0.24
PPARGC1B-202ENST00000360453 ARID3AQ99856 593 aa16.56■□□□□ 0.24
PPARGC1B-202ENST00000360453 PIK3R4Q99570 1358 aa16.56■□□□□ 0.24
PPARGC1B-202ENST00000360453 LMBRD1Q9NUN5 540 aa16.56■□□□□ 0.24
PPARGC1B-202ENST00000360453 ALKQ9UM73 1620 aa16.56■□□□□ 0.24
PPARGC1B-202ENST00000360453 PLPPR3Q6T4P5 718 aa16.55■□□□□ 0.24
PPARGC1B-202ENST00000360453 KNDC1Q76NI1 1749 aa16.55■□□□□ 0.24
PPARGC1B-202ENST00000360453 ZDHHC9Q9Y397 364 aa16.55■□□□□ 0.24
PPARGC1B-202ENST00000360453 VSIG10Q8N0Z9 540 aa16.55■□□□□ 0.24
PPARGC1B-202ENST00000360453 GPT2Q8TD30 523 aa16.55■□□□□ 0.24
PPARGC1B-202ENST00000360453 NEK4P51957 841 aa16.54■□□□□ 0.24
PPARGC1B-202ENST00000360453 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.54■□□□□ 0.24
PPARGC1B-202ENST00000360453 ANP32BQ92688 251 aaKnown RBP16.54■□□□□ 0.24
PPARGC1B-202ENST00000360453 DIP2CQ9Y2E4 1556 aa16.54■□□□□ 0.24
PPARGC1B-202ENST00000360453 KIAA1211Q6ZU35 1233 aa16.54■□□□□ 0.24
PPARGC1B-202ENST00000360453 OSCARQ8IYS5 282 aa16.54■□□□□ 0.24
PPARGC1B-202ENST00000360453 SYCE3A1L190 88 aa16.53■□□□□ 0.24
PPARGC1B-202ENST00000360453 RBM10P98175 930 aaKnown RBP16.53■□□□□ 0.24
PPARGC1B-202ENST00000360453 LMOD3Q0VAK6 560 aa16.53■□□□□ 0.24
PPARGC1B-202ENST00000360453 GDPD2Q9HCC8 539 aa16.53■□□□□ 0.24
PPARGC1B-202ENST00000360453 METP08581 1390 aa16.53■□□□□ 0.24
PPARGC1B-202ENST00000360453 RILPL2Q969X0 211 aa16.53■□□□□ 0.24
PPARGC1B-202ENST00000360453 CPS1P31327 1500 aa16.52■□□□□ 0.24
PPARGC1B-202ENST00000360453 LARP6Q9BRS8 491 aaKnown RBP16.52■□□□□ 0.24
PPARGC1B-202ENST00000360453 TMEM131LA2VDJ0 1609 aa16.52■□□□□ 0.24
PPARGC1B-202ENST00000360453 UPF3BQ9BZI7 483 aaKnown RBP16.52■□□□□ 0.23
PPARGC1B-202ENST00000360453 PALD1Q9ULE6 856 aa16.52■□□□□ 0.23
PPARGC1B-202ENST00000360453 ATP10DQ9P241 1426 aa16.52■□□□□ 0.23
PPARGC1B-202ENST00000360453 RTL1A6NKG5 1358 aa16.52■□□□□ 0.23
PPARGC1B-202ENST00000360453 ST18O60284 1047 aa16.51■□□□□ 0.23
PPARGC1B-202ENST00000360453 XPCQ01831 940 aaPredicted RBP16.51■□□□□ 0.23
PPARGC1B-202ENST00000360453 CCDC173Q0VFZ6 552 aa16.51■□□□□ 0.23
PPARGC1B-202ENST00000360453 KIF20BQ96Q89 1820 aa16.51■□□□□ 0.23
PPARGC1B-202ENST00000360453 TRIM6-TRIM34B2RNG4 842 aa16.51■□□□□ 0.23
PPARGC1B-202ENST00000360453 MAP4K4O95819 1239 aaPredicted RBP16.51■□□□□ 0.23
PPARGC1B-202ENST00000360453 CCDC61Q9Y6R9 512 aa16.51■□□□□ 0.23
PPARGC1B-202ENST00000360453 ANKRD26Q9UPS8 1709 aa16.51■□□□□ 0.23
PPARGC1B-202ENST00000360453 CASC1Q6TDU7 716 aa16.51■□□□□ 0.23
PPARGC1B-202ENST00000360453 ISY1Q9ULR0 285 aaKnown RBP16.51■□□□□ 0.23
PPARGC1B-202ENST00000360453 PRR36Q9H6K5 1346 aa16.5■□□□□ 0.23
PPARGC1B-202ENST00000360453 MSNP26038 577 aaKnown RBP16.5■□□□□ 0.23
PPARGC1B-202ENST00000360453 NUCB2P80303 420 aa16.5■□□□□ 0.23
PPARGC1B-202ENST00000360453 CYB5RLQ6IPT4 315 aa16.5■□□□□ 0.23
PPARGC1B-202ENST00000360453 TMEM63CQ9P1W3 806 aa16.5■□□□□ 0.23
PPARGC1B-202ENST00000360453 DLG5Q8TDM6 1919 aa16.5■□□□□ 0.23
PPARGC1B-202ENST00000360453 RPAP2Q8IXW5 612 aaPredicted RBP16.49■□□□□ 0.23
PPARGC1B-202ENST00000360453 ANO2Q9NQ90 1003 aa16.49■□□□□ 0.23
PPARGC1B-202ENST00000360453 TSPYL4Q9UJ04 414 aa16.49■□□□□ 0.23
PPARGC1B-202ENST00000360453 CHL1O00533 1208 aa16.48■□□□□ 0.23
PPARGC1B-202ENST00000360453 CYP2E1P05181 493 aaPredicted RBP16.48■□□□□ 0.23
PPARGC1B-202ENST00000360453 PDE1AP54750 535 aa16.48■□□□□ 0.23
PPARGC1B-202ENST00000360453 ZSCAN30Q86W11 494 aa16.48■□□□□ 0.23
PPARGC1B-202ENST00000360453 R3HCC1Q9Y3T6 440 aaKnown RBP16.48■□□□□ 0.23
PPARGC1B-202ENST00000360453 RGS12O14924 1447 aa16.48■□□□□ 0.23
PPARGC1B-202ENST00000360453 ARHGAP31Q2M1Z3 1444 aa16.48■□□□□ 0.23
PPARGC1B-202ENST00000360453 ERC2O15083 957 aa16.48■□□□□ 0.23
PPARGC1B-202ENST00000360453 NUTM2GQ5VZR2 741 aa16.48■□□□□ 0.23
PPARGC1B-202ENST00000360453 TMX3Q96JJ7 454 aa16.48■□□□□ 0.23
PPARGC1B-202ENST00000360453 IL1RAPL2Q9NP60 686 aa16.48■□□□□ 0.23
PPARGC1B-202ENST00000360453 PNMA6EA0A0J9YXQ4 647 aa16.47■□□□□ 0.23
PPARGC1B-202ENST00000360453 PLEKHG5O94827 1062 aa16.47■□□□□ 0.23
PPARGC1B-202ENST00000360453 EDC4Q6P2E9 1401 aaKnown RBP16.47■□□□□ 0.23
PPARGC1B-202ENST00000360453 PREX1Q8TCU6 1659 aa16.47■□□□□ 0.23
PPARGC1B-202ENST00000360453 UNC5CLQ8IV45 518 aa16.47■□□□□ 0.23
PPARGC1B-202ENST00000360453 PPP1R9BQ96SB3 815 aa16.47■□□□□ 0.23
PPARGC1B-202ENST00000360453 REC8O95072 547 aa16.46■□□□□ 0.23
PPARGC1B-202ENST00000360453 MTHFSDQ2M296 383 aaKnown RBP16.46■□□□□ 0.23
PPARGC1B-202ENST00000360453 IL25Q9H293 177 aa16.45■□□□□ 0.22
PPARGC1B-202ENST00000360453 CPSF1Q10570 1443 aaKnown RBP16.45■□□□□ 0.22
PPARGC1B-202ENST00000360453 PTMSP20962 102 aa16.45■□□□□ 0.22
PPARGC1B-202ENST00000360453 FKBP5Q13451 457 aaPredicted RBP16.45■□□□□ 0.22
PPARGC1B-202ENST00000360453 CDC42BPGQ6DT37 1551 aa16.44■□□□□ 0.22
PPARGC1B-202ENST00000360453 ZNF445P59923 1031 aa16.44■□□□□ 0.22
PPARGC1B-202ENST00000360453 FAM69CQ0P6D2 419 aa16.44■□□□□ 0.22
PPARGC1B-202ENST00000360453 CLEC17AQ6ZS10 378 aa16.44■□□□□ 0.22
PPARGC1B-202ENST00000360453 LTV1Q96GA3 475 aaPredicted RBP16.44■□□□□ 0.22
PPARGC1B-202ENST00000360453 ATP7BP35670 1465 aa16.44■□□□□ 0.22
PPARGC1B-202ENST00000360453 CDK12Q9NYV4 1490 aaPredicted RBP16.44■□□□□ 0.22
PPARGC1B-202ENST00000360453 ACEP12821 1306 aa16.44■□□□□ 0.22
PPARGC1B-202ENST00000360453 MAP3K19Q56UN5 1328 aa16.43■□□□□ 0.22
PPARGC1B-202ENST00000360453 NUTM1Q86Y26 1132 aa16.43■□□□□ 0.22
PPARGC1B-202ENST00000360453 RTF1Q92541 710 aaKnown RBP16.43■□□□□ 0.22
PPARGC1B-202ENST00000360453 CLTCQ00610 1675 aaKnown RBP16.43■□□□□ 0.22
PPARGC1B-202ENST00000360453 FAM13BQ9NYF5 915 aa16.43■□□□□ 0.22
PPARGC1B-202ENST00000360453 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.43■□□□□ 0.22
PPARGC1B-202ENST00000360453 GADD45BO75293 160 aaPredicted RBP16.42■□□□□ 0.22
PPARGC1B-202ENST00000360453 TTC21BQ7Z4L5 1316 aa16.41■□□□□ 0.22
PPARGC1B-202ENST00000360453 RRP9O43818 475 aaKnown RBP16.41■□□□□ 0.22
PPARGC1B-202ENST00000360453 HMMRO75330 724 aa16.41■□□□□ 0.22
PPARGC1B-202ENST00000360453 SLC26A8Q96RN1 970 aa16.41■□□□□ 0.22
PPARGC1B-202ENST00000360453 LRRFIP2Q9Y608 721 aaKnown RBP16.41■□□□□ 0.22
PPARGC1B-202ENST00000360453 ESYT1Q9BSJ8 1104 aa16.4■□□□□ 0.22
PPARGC1B-202ENST00000360453 CWC22Q9HCG8 908 aaKnown RBP16.4■□□□□ 0.22
PPARGC1B-202ENST00000360453 A2ML1A8K2U0 1454 aa16.4■□□□□ 0.22
PPARGC1B-202ENST00000360453 NEO1Q92859 1461 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms