RNA–Protein interactions for RNA: ENST00000360449.3

CPNE8-202, Transcript of copine 8, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CPNE8, Length 1,757 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-202ENST00000360449 HAX1O00165 279 aa5.7□□□□□ -1.5
CPNE8-202ENST00000360449 TREHO43280 583 aa5.7□□□□□ -1.5
CPNE8-202ENST00000360449 FMR1Q06787 632 aaKnown RBP eCLIP5.7□□□□□ -1.5
CPNE8-202ENST00000360449 ECM1Q16610 540 aa5.7□□□□□ -1.5
CPNE8-202ENST00000360449 ZBTB33Q86T24 672 aa5.7□□□□□ -1.5
CPNE8-202ENST00000360449 DMRTB1Q96MA1 342 aa5.7□□□□□ -1.5
CPNE8-202ENST00000360449 LNPKQ9C0E8 428 aa5.7□□□□□ -1.5
CPNE8-202ENST00000360449 ARID4BQ4LE39 1312 aaPredicted RBP5.7□□□□□ -1.5
CPNE8-202ENST00000360449 LDHBP07195 334 aaKnown RBP5.69□□□□□ -1.5
CPNE8-202ENST00000360449 NPR3P17342 541 aa5.69□□□□□ -1.5
CPNE8-202ENST00000360449 WEE1P30291 646 aa5.69□□□□□ -1.5
CPNE8-202ENST00000360449 RAD51AP2Q09MP3 1159 aa5.69□□□□□ -1.5
CPNE8-202ENST00000360449 OXLD1Q5BKU9 147 aa5.69□□□□□ -1.5
CPNE8-202ENST00000360449 C9orf131Q5VYM1 1079 aa5.69□□□□□ -1.5
CPNE8-202ENST00000360449 TMC7Q7Z402 723 aa5.69□□□□□ -1.5
CPNE8-202ENST00000360449 TMC4Q7Z404 712 aa5.69□□□□□ -1.5
CPNE8-202ENST00000360449 DZIP3Q86Y13 1208 aaKnown RBP5.69□□□□□ -1.5
CPNE8-202ENST00000360449 KCNK17Q96T54 332 aa5.69□□□□□ -1.5
CPNE8-202ENST00000360449 TINF2Q9BSI4 451 aa5.69□□□□□ -1.5
CPNE8-202ENST00000360449 MAP10Q9P2G4 905 aa5.69□□□□□ -1.5
CPNE8-202ENST00000360449 SEPT3Q9UH03 358 aa5.69□□□□□ -1.5
CPNE8-202ENST00000360449 SFI1A8K8P3 1242 aa5.68□□□□□ -1.5
CPNE8-202ENST00000360449 ACTN4O43707 911 aaKnown RBP5.68□□□□□ -1.5
CPNE8-202ENST00000360449 RNF40O75150 1001 aa5.68□□□□□ -1.5
CPNE8-202ENST00000360449 JUNDP17535 347 aa5.68□□□□□ -1.5
CPNE8-202ENST00000360449 USP4Q13107 963 aa5.68□□□□□ -1.5
CPNE8-202ENST00000360449 PDE3BQ13370 1112 aa5.68□□□□□ -1.5
CPNE8-202ENST00000360449 METTL16Q86W50 562 aaKnown RBP5.68□□□□□ -1.5
CPNE8-202ENST00000360449 ADAM32Q8TC27 787 aa5.68□□□□□ -1.5
CPNE8-202ENST00000360449 TMC1Q8TDI8 760 aa5.68□□□□□ -1.5
CPNE8-202ENST00000360449 ARHGAP9Q9BRR9 750 aa5.68□□□□□ -1.5
CPNE8-202ENST00000360449 MKNK1Q9BUB5 465 aa5.68□□□□□ -1.5
CPNE8-202ENST00000360449 CAPN10Q9HC96 672 aa5.68□□□□□ -1.5
CPNE8-202ENST00000360449 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.68□□□□□ -1.57e-6■■■■■ 74.5
CPNE8-202ENST00000360449 KIAA1024Q9UPX6 916 aa5.68□□□□□ -1.5
CPNE8-202ENST00000360449 CLSTN1O94985 981 aa5.67□□□□□ -1.5
CPNE8-202ENST00000360449 GTF2F1P35269 517 aaKnown RBP eCLIP5.67□□□□□ -1.5
CPNE8-202ENST00000360449 ZNF76P36508 570 aa5.67□□□□□ -1.5
CPNE8-202ENST00000360449 PLCB3Q01970 1234 aa5.67□□□□□ -1.5
CPNE8-202ENST00000360449 ALKBH2Q6NS38 261 aa5.67□□□□□ -1.5
CPNE8-202ENST00000360449 LAPTM4BQ86VI4 370 aa5.67□□□□□ -1.5
CPNE8-202ENST00000360449 GMLQ99445 158 aa5.67□□□□□ -1.5
CPNE8-202ENST00000360449 ZBED2Q9BTP6 218 aa5.67□□□□□ -1.5
CPNE8-202ENST00000360449 VTI1BQ9UEU0 232 aa5.67□□□□□ -1.5
CPNE8-202ENST00000360449 PARP2Q9UGN5 583 aa5.67□□□□□ -1.5
CPNE8-202ENST00000360449 FOXO3O43524 673 aa5.67□□□□□ -1.5
CPNE8-202ENST00000360449 CCNYL3P0C7X3 344 aa5.67□□□□□ -1.5
CPNE8-202ENST00000360449 PSMD2Q13200 908 aa5.67□□□□□ -1.5
CPNE8-202ENST00000360449 SAMD7Q7Z3H4 446 aa5.67□□□□□ -1.5
CPNE8-202ENST00000360449 PRKD2Q9BZL6 878 aa5.67□□□□□ -1.5
CPNE8-202ENST00000360449 HOXB3P14651 431 aaPredicted RBP5.66□□□□□ -1.5
CPNE8-202ENST00000360449 IBSPP21815 317 aaPredicted RBP5.66□□□□□ -1.5
CPNE8-202ENST00000360449 DAB2P98082 770 aa5.66□□□□□ -1.5
CPNE8-202ENST00000360449 FANCCQ00597 558 aa5.66□□□□□ -1.5
CPNE8-202ENST00000360449 FKBP5Q13451 457 aaPredicted RBP5.66□□□□□ -1.5
CPNE8-202ENST00000360449 NOL8Q76FK4 1167 aaKnown RBP5.66□□□□□ -1.5
CPNE8-202ENST00000360449 ANP32EQ9BTT0 268 aa5.66□□□□□ -1.5
CPNE8-202ENST00000360449 SLC4A5Q9BY07 1137 aa5.66□□□□□ -1.5
CPNE8-202ENST00000360449 SEPT9Q9UHD8 586 aaPredicted RBP5.66□□□□□ -1.5
CPNE8-202ENST00000360449 IGFBP4P22692 258 aa5.65□□□□□ -1.5
CPNE8-202ENST00000360449 MAPK8P45983 427 aa5.65□□□□□ -1.5
CPNE8-202ENST00000360449 MTMR3Q13615 1198 aa5.65□□□□□ -1.5
CPNE8-202ENST00000360449 CCDC144BQ3MJ40 725 aa5.65□□□□□ -1.5
CPNE8-202ENST00000360449 SDE2Q6IQ49 451 aa5.65□□□□□ -1.5
CPNE8-202ENST00000360449 BRICD5Q6PL45 260 aa5.65□□□□□ -1.5
CPNE8-202ENST00000360449 VPS37DQ86XT2 251 aa5.65□□□□□ -1.5
CPNE8-202ENST00000360449 DHX38Q92620 1227 aaKnown RBP5.65□□□□□ -1.5
CPNE8-202ENST00000360449 VTI1AQ96AJ9 217 aa5.65□□□□□ -1.5
CPNE8-202ENST00000360449 CCDC85AQ96PX6 553 aaPredicted RBP5.65□□□□□ -1.5
CPNE8-202ENST00000360449 DUSP9Q99956 384 aaKnown RBP5.65□□□□□ -1.5
CPNE8-202ENST00000360449 EVA1BQ9NVM1 165 aa5.65□□□□□ -1.5
CPNE8-202ENST00000360449 PCDHGA11Q9Y5H2 935 aa5.65□□□□□ -1.5
CPNE8-202ENST00000360449 ARID5AQ03989 594 aa5.65□□□□□ -1.51
CPNE8-202ENST00000360449 PUS10Q3MIT2 529 aaKnown RBP5.65□□□□□ -1.51
CPNE8-202ENST00000360449 LDLRAD1Q5T700 205 aa5.65□□□□□ -1.51
CPNE8-202ENST00000360449 RNF19BQ6ZMZ0 732 aa5.65□□□□□ -1.51
CPNE8-202ENST00000360449 TRIM52Q96A61 297 aa5.65□□□□□ -1.51
CPNE8-202ENST00000360449 METTL14Q9HCE5 456 aaKnown RBP5.65□□□□□ -1.51
CPNE8-202ENST00000360449 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.65□□□□□ -1.51
CPNE8-202ENST00000360449 NR1I2O75469 434 aa5.64□□□□□ -1.51
CPNE8-202ENST00000360449 EHHADHQ08426 723 aa5.64□□□□□ -1.51
CPNE8-202ENST00000360449 RBL2Q08999 1139 aa5.64□□□□□ -1.51
CPNE8-202ENST00000360449 DSC3Q14574 896 aa5.64□□□□□ -1.51
CPNE8-202ENST00000360449 NBPF20Q3BBV1 942 aa5.64□□□□□ -1.51
CPNE8-202ENST00000360449 ALG1LQ6GMV1 187 aa5.64□□□□□ -1.51
CPNE8-202ENST00000360449 BLOC1S3Q6QNY0 202 aa5.64□□□□□ -1.51
CPNE8-202ENST00000360449 FRMD6Q96NE9 622 aa5.64□□□□□ -1.51
CPNE8-202ENST00000360449 OCSTAMPQ9BR26 566 aa5.64□□□□□ -1.51
CPNE8-202ENST00000360449 NBPF3Q9H094 633 aa5.64□□□□□ -1.51
CPNE8-202ENST00000360449 MYCP01106 439 aaPredicted RBP5.63□□□□□ -1.51
CPNE8-202ENST00000360449 DNAJA1P31689 397 aaKnown RBP5.63□□□□□ -1.51
CPNE8-202ENST00000360449 AAMPQ13685 434 aa5.63□□□□□ -1.51
CPNE8-202ENST00000360449 SEPT12Q8IYM1 358 aa5.63□□□□□ -1.51
CPNE8-202ENST00000360449 GAS2L2Q8NHY3 880 aa5.63□□□□□ -1.51
CPNE8-202ENST00000360449 ZCRB1Q8TBF4 217 aaKnown RBP5.63□□□□□ -1.51
CPNE8-202ENST00000360449 ALKBH8Q96BT7 664 aaKnown RBP5.63□□□□□ -1.51
CPNE8-202ENST00000360449 NUDT12Q9BQG2 462 aa5.63□□□□□ -1.51
CPNE8-202ENST00000360449 CYLDQ9NQC7 956 aa5.63□□□□□ -1.51
CPNE8-202ENST00000360449 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.63□□□□□ -1.51
CPNE8-202ENST00000360449 IQSEC3Q9UPP2 1182 aaPredicted RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms