RNA–Protein interactions for RNA: ENST00000359972.6

APAF1-203, Transcript of apoptotic peptidase activating factor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene APAF1, Length 7,029 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-203ENST00000359972 IKQ13123 557 aaPredicted RBP17.7■□□□□ 0.42
APAF1-203ENST00000359972 FERMT3Q86UX7 667 aa17.7■□□□□ 0.42
APAF1-203ENST00000359972 CHD1LQ86WJ1 897 aa17.7■□□□□ 0.42
APAF1-203ENST00000359972 HIP1O00291 1037 aa17.7■□□□□ 0.42
APAF1-203ENST00000359972 SPECC1Q5M775 1068 aa17.7■□□□□ 0.42
APAF1-203ENST00000359972 SCLT1Q96NL6 688 aa17.7■□□□□ 0.42
APAF1-203ENST00000359972 TMCO5BA8MYB1 307 aa17.69■□□□□ 0.42
APAF1-203ENST00000359972 STAMBPO95630 424 aa17.69■□□□□ 0.42
APAF1-203ENST00000359972 EXOSC9Q06265 439 aaKnown RBP17.69■□□□□ 0.42
APAF1-203ENST00000359972 PUS7Q96PZ0 661 aaKnown RBP17.69■□□□□ 0.42
APAF1-203ENST00000359972 POTEB2H3BUK9 544 aa17.69■□□□□ 0.42
APAF1-203ENST00000359972 MSL1Q68DK7 614 aa17.69■□□□□ 0.42
APAF1-203ENST00000359972 ZNF428Q96B54 188 aa17.69■□□□□ 0.42
APAF1-203ENST00000359972 TMC6Q7Z403 805 aa17.69■□□□□ 0.42
APAF1-203ENST00000359972 IMMTQ16891 758 aaKnown RBP17.68■□□□□ 0.42
APAF1-203ENST00000359972 HLTFQ14527 1009 aaKnown RBP eCLIP17.68■□□□□ 0.42
APAF1-203ENST00000359972 SPECC1LQ69YQ0 1117 aa17.68■□□□□ 0.42
APAF1-203ENST00000359972 HYPKQ9NX55 129 aa17.68■□□□□ 0.42
APAF1-203ENST00000359972 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.68■□□□□ 0.42
APAF1-203ENST00000359972 V9GYY5 206 aaPredicted RBP17.68■□□□□ 0.42
APAF1-203ENST00000359972 EVC2Q86UK5 1308 aa17.68■□□□□ 0.42
APAF1-203ENST00000359972 KLHL10Q6JEL2 608 aa17.68■□□□□ 0.42
APAF1-203ENST00000359972 DAAM2Q86T65 1068 aa17.68■□□□□ 0.42
APAF1-203ENST00000359972 MCM5P33992 734 aa17.67■□□□□ 0.42
APAF1-203ENST00000359972 CCDC144AA2RUR9 1427 aa17.67■□□□□ 0.42
APAF1-203ENST00000359972 PAXBP1Q9Y5B6 917 aa17.67■□□□□ 0.42
APAF1-203ENST00000359972 FAM177BA6PVY3 158 aa17.67■□□□□ 0.42
APAF1-203ENST00000359972 ANO10Q9NW15 660 aa17.67■□□□□ 0.42
APAF1-203ENST00000359972 GSTTP1A0A1W2PQM5 241 aa17.66■□□□□ 0.42
APAF1-203ENST00000359972 MATR3P43243 847 aaKnown RBP eCLIP17.66■□□□□ 0.42
APAF1-203ENST00000359972 CPSF2Q9P2I0 782 aaKnown RBP17.66■□□□□ 0.42
APAF1-203ENST00000359972 KIF3BO15066 747 aa17.66■□□□□ 0.42
APAF1-203ENST00000359972 CCDC83Q8IWF9 413 aa17.66■□□□□ 0.42
APAF1-203ENST00000359972 NUP133Q8WUM0 1156 aa17.66■□□□□ 0.42
APAF1-203ENST00000359972 PANK2Q9BZ23 570 aa17.66■□□□□ 0.42
APAF1-203ENST00000359972 BRD4O60885 1362 aaPredicted RBP17.66■□□□□ 0.42
APAF1-203ENST00000359972 MINK1Q8N4C8 1332 aaPredicted RBP17.66■□□□□ 0.42
APAF1-203ENST00000359972 CCDC6Q16204 474 aa17.66■□□□□ 0.42
APAF1-203ENST00000359972 SARNPP82979 210 aaKnown RBP17.66■□□□□ 0.42
APAF1-203ENST00000359972 CWC27Q6UX04 472 aaKnown RBP17.66■□□□□ 0.42
APAF1-203ENST00000359972 CCDC69A6NI79 296 aa17.66■□□□□ 0.42
APAF1-203ENST00000359972 PDE3AQ14432 1141 aa17.66■□□□□ 0.42
APAF1-203ENST00000359972 PPM1EQ8WY54 764 aa17.66■□□□□ 0.42
APAF1-203ENST00000359972 CASTP20810 708 aaKnown RBP17.65■□□□□ 0.42
APAF1-203ENST00000359972 NAA25Q14CX7 972 aa17.65■□□□□ 0.42
APAF1-203ENST00000359972 TSR2Q969E8 191 aaKnown RBP17.65■□□□□ 0.42
APAF1-203ENST00000359972 NUP88Q99567 741 aaPredicted RBP17.65■□□□□ 0.42
APAF1-203ENST00000359972 WASHC2AQ641Q2 1341 aa17.65■□□□□ 0.42
APAF1-203ENST00000359972 CAPN2P17655 700 aa17.65■□□□□ 0.42
APAF1-203ENST00000359972 ARID4AP29374 1257 aaPredicted RBP17.65■□□□□ 0.42
APAF1-203ENST00000359972 ABCC8Q09428 1581 aa17.65■□□□□ 0.42
APAF1-203ENST00000359972 GDPD2Q9HCC8 539 aa17.65■□□□□ 0.42
APAF1-203ENST00000359972 RNF216Q9NWF9 866 aaPredicted RBP17.65■□□□□ 0.42
APAF1-203ENST00000359972 RB1CC1Q8TDY2 1594 aa17.65■□□□□ 0.42
APAF1-203ENST00000359972 HSF2BPO75031 334 aa17.65■□□□□ 0.42
APAF1-203ENST00000359972 MCM6Q14566 821 aa17.65■□□□□ 0.42
APAF1-203ENST00000359972 DRC1Q96MC2 740 aa17.65■□□□□ 0.42
APAF1-203ENST00000359972 RASSF4Q9H2L5 321 aa17.65■□□□□ 0.42
APAF1-203ENST00000359972 PPP6R1Q9UPN7 881 aa17.65■□□□□ 0.42
APAF1-203ENST00000359972 GBP6Q6ZN66 633 aa17.64■□□□□ 0.42
APAF1-203ENST00000359972 SSBP05455 408 aaKnown RBP eCLIP17.64■□□□□ 0.41
APAF1-203ENST00000359972 FBF1Q8TES7 1133 aa17.64■□□□□ 0.41
APAF1-203ENST00000359972 NOLC1Q14978 699 aaKnown RBP eCLIP17.64■□□□□ 0.41
APAF1-203ENST00000359972 TBC1D2Q9BYX2 928 aa17.64■□□□□ 0.41
APAF1-203ENST00000359972 PAFAH1B1P43034 410 aa17.64■□□□□ 0.41
APAF1-203ENST00000359972 ZSCAN23Q3MJ62 389 aa17.64■□□□□ 0.41
APAF1-203ENST00000359972 BLOC1S2Q6QNY1 142 aa17.64■□□□□ 0.41
APAF1-203ENST00000359972 SMAP1Q8IYB5 467 aaPredicted RBP17.63■□□□□ 0.41
APAF1-203ENST00000359972 TRIM22Q8IYM9 498 aa17.63■□□□□ 0.41
APAF1-203ENST00000359972 CUX2O14529 1486 aa17.63■□□□□ 0.41
APAF1-203ENST00000359972 ERC1Q8IUD2 1116 aa17.63■□□□□ 0.41
APAF1-203ENST00000359972 CCDC12Q8WUD4 166 aaPredicted RBP17.63■□□□□ 0.41
APAF1-203ENST00000359972 CTNNBL1Q8WYA6 563 aaPredicted RBP17.63■□□□□ 0.41
APAF1-203ENST00000359972 ZSCAN31Q96LW9 406 aaPredicted RBP17.63■□□□□ 0.41
APAF1-203ENST00000359972 VPS18Q9P253 973 aa17.63■□□□□ 0.41
APAF1-203ENST00000359972 TBC1D2BQ9UPU7 963 aa17.63■□□□□ 0.41
APAF1-203ENST00000359972 GNAI2P04899 355 aa17.62■□□□□ 0.41
APAF1-203ENST00000359972 KRBA2Q6ZNG9 492 aa17.62■□□□□ 0.41
APAF1-203ENST00000359972 CCDC18Q5T9S5 1454 aa17.62■□□□□ 0.41
APAF1-203ENST00000359972 SMG6Q86US8 1419 aaKnown RBP17.62■□□□□ 0.41
APAF1-203ENST00000359972 WDR66Q8TBY9 1149 aa17.62■□□□□ 0.41
APAF1-203ENST00000359972 TTC39AQ5SRH9 613 aa17.62■□□□□ 0.41
APAF1-203ENST00000359972 TCP11L2Q8N4U5 519 aa17.62■□□□□ 0.41
APAF1-203ENST00000359972 GNAI3P08754 354 aa17.62■□□□□ 0.41
APAF1-203ENST00000359972 C6orf163Q5TEZ5 329 aa17.62■□□□□ 0.41
APAF1-203ENST00000359972 CEP112Q8N8E3 955 aa17.62■□□□□ 0.41
APAF1-203ENST00000359972 XRCC6P12956 609 aaKnown RBP eCLIP17.61■□□□□ 0.41
APAF1-203ENST00000359972 SEPT6Q14141 434 aa17.61■□□□□ 0.41
APAF1-203ENST00000359972 PIBF1Q8WXW3 757 aa17.61■□□□□ 0.41
APAF1-203ENST00000359972 SIL1Q9H173 461 aa17.61■□□□□ 0.41
APAF1-203ENST00000359972 NOL7Q9UMY1 257 aaKnown RBP17.61■□□□□ 0.41
APAF1-203ENST00000359972 ATRIPQ8WXE1 791 aa17.61■□□□□ 0.41
APAF1-203ENST00000359972 NEMFO60524 1076 aa17.61■□□□□ 0.41
APAF1-203ENST00000359972 GNG11P61952 73 aa17.6■□□□□ 0.41
APAF1-203ENST00000359972 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.6■□□□□ 0.41
APAF1-203ENST00000359972 CEP83Q9Y592 693 aa17.6■□□□□ 0.41
APAF1-203ENST00000359972 MVPQ14764 893 aaKnown RBP17.6■□□□□ 0.41
APAF1-203ENST00000359972 GSDMDP57764 484 aa17.59■□□□□ 0.41
APAF1-203ENST00000359972 CFAP57Q96MR6 1250 aa17.59■□□□□ 0.41
APAF1-203ENST00000359972 NAP1L3Q99457 506 aaPredicted RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms