RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 PHF8Q9UPP1 1060 aa18.96■□□□□ 0.63
GABPB1-202ENST00000359031 LRRC37A3O60309 1634 aa18.96■□□□□ 0.63
GABPB1-202ENST00000359031 PHRF1Q9P1Y6 1649 aaKnown RBP18.96■□□□□ 0.63
GABPB1-202ENST00000359031 SOX12O15370 315 aa18.96■□□□□ 0.63
GABPB1-202ENST00000359031 ATF3P18847 181 aa18.96■□□□□ 0.63
GABPB1-202ENST00000359031 AMPHP49418 695 aa18.96■□□□□ 0.63
GABPB1-202ENST00000359031 MRPL50Q8N5N7 158 aaKnown RBP18.96■□□□□ 0.63
GABPB1-202ENST00000359031 CADPS2Q86UW7 1296 aa18.95■□□□□ 0.62
GABPB1-202ENST00000359031 TMEM57Q8N5G2 664 aa18.95■□□□□ 0.62
GABPB1-202ENST00000359031 FAM83GA6ND36 823 aa18.94■□□□□ 0.62
GABPB1-202ENST00000359031 HAP1P54257 671 aaPredicted RBP18.94■□□□□ 0.62
GABPB1-202ENST00000359031 HDAC1Q13547 482 aaPredicted RBP18.94■□□□□ 0.62
GABPB1-202ENST00000359031 TWISTNBQ3B726 338 aaPredicted RBP18.94■□□□□ 0.62
GABPB1-202ENST00000359031 NCOA3Q9Y6Q9 1424 aa18.94■□□□□ 0.62
GABPB1-202ENST00000359031 NFAT5O94916 1531 aa18.94■□□□□ 0.62
GABPB1-202ENST00000359031 NPM2Q86SE8 214 aaKnown RBP18.93■□□□□ 0.62
GABPB1-202ENST00000359031 UPF1Q92900 1129 aaKnown RBP eCLIP18.93■□□□□ 0.62
GABPB1-202ENST00000359031 CHMP4BQ9H444 224 aaKnown RBP18.93■□□□□ 0.62
GABPB1-202ENST00000359031 KIF1AQ12756 1690 aa18.93■□□□□ 0.62
GABPB1-202ENST00000359031 TSPYL6Q8N831 410 aa18.92■□□□□ 0.62
GABPB1-202ENST00000359031 KIAA0232Q92628 1395 aa18.92■□□□□ 0.62
GABPB1-202ENST00000359031 ABTB2Q8N961 1025 aa18.92■□□□□ 0.62
GABPB1-202ENST00000359031 ZBTB47Q9UFB7 747 aaPredicted RBP18.92■□□□□ 0.62
GABPB1-202ENST00000359031 CRB1P82279 1406 aa18.91■□□□□ 0.62
GABPB1-202ENST00000359031 AHDC1Q5TGY3 1603 aaPredicted RBP18.91■□□□□ 0.62
GABPB1-202ENST00000359031 NUTM2BA6NNL0 878 aaPredicted RBP18.91■□□□□ 0.62
GABPB1-202ENST00000359031 NUTM2EB1AL46 878 aaPredicted RBP18.91■□□□□ 0.62
GABPB1-202ENST00000359031 HOXC9P31274 260 aa18.91■□□□□ 0.62
GABPB1-202ENST00000359031 DCTN1Q14203 1278 aa18.91■□□□□ 0.62
GABPB1-202ENST00000359031 NUTM2AQ8IVF1 878 aaPredicted RBP18.91■□□□□ 0.62
GABPB1-202ENST00000359031 DDRGK1Q96HY6 314 aa18.91■□□□□ 0.62
GABPB1-202ENST00000359031 ZBTB40Q9NUA8 1239 aa18.91■□□□□ 0.62
GABPB1-202ENST00000359031 ABCC4O15439 1325 aa18.91■□□□□ 0.62
GABPB1-202ENST00000359031 CHL1O00533 1208 aa18.9■□□□□ 0.62
GABPB1-202ENST00000359031 RXRBP28702 533 aa18.9■□□□□ 0.62
GABPB1-202ENST00000359031 GAS2L2Q8NHY3 880 aa18.9■□□□□ 0.62
GABPB1-202ENST00000359031 C19orf44Q9H6X5 657 aa18.9■□□□□ 0.62
GABPB1-202ENST00000359031 C8orf58Q8NAV2 365 aa18.89■□□□□ 0.62
GABPB1-202ENST00000359031 EYA1Q99502 592 aa18.89■□□□□ 0.62
GABPB1-202ENST00000359031 PDZRN3Q9UPQ7 1066 aa18.89■□□□□ 0.62
GABPB1-202ENST00000359031 API5Q9BZZ5 524 aaKnown RBP18.89■□□□□ 0.61
GABPB1-202ENST00000359031 PAK3O75914 559 aaPredicted RBP18.88■□□□□ 0.61
GABPB1-202ENST00000359031 TRPM3Q9HCF6 1732 aaPredicted RBP18.88■□□□□ 0.61
GABPB1-202ENST00000359031 SLIT3O75094 1523 aa18.87■□□□□ 0.61
GABPB1-202ENST00000359031 HTATSF1O43719 755 aaKnown RBP18.87■□□□□ 0.61
GABPB1-202ENST00000359031 MCM10Q7L590 875 aa18.87■□□□□ 0.61
GABPB1-202ENST00000359031 MTHFSDQ2M296 383 aaKnown RBP18.86■□□□□ 0.61
GABPB1-202ENST00000359031 RTF1Q92541 710 aaKnown RBP18.86■□□□□ 0.61
GABPB1-202ENST00000359031 ELL2O00472 640 aaPredicted RBP18.85■□□□□ 0.61
GABPB1-202ENST00000359031 NUTM2GQ5VZR2 741 aa18.85■□□□□ 0.61
GABPB1-202ENST00000359031 BRINP3Q76B58 766 aa18.85■□□□□ 0.61
GABPB1-202ENST00000359031 SMC5Q8IY18 1101 aa18.85■□□□□ 0.61
GABPB1-202ENST00000359031 ESCO1Q5FWF5 840 aa18.84■□□□□ 0.61
GABPB1-202ENST00000359031 KCNH5Q8NCM2 988 aa18.84■□□□□ 0.61
GABPB1-202ENST00000359031 PSME1Q06323 249 aa18.83■□□□□ 0.61
GABPB1-202ENST00000359031 AFF2P51816 1311 aa18.83■□□□□ 0.6
GABPB1-202ENST00000359031 FAM208AQ9UK61 1670 aaKnown RBP18.83■□□□□ 0.6
GABPB1-202ENST00000359031 ZBTB7BO15156 539 aaPredicted RBP18.82■□□□□ 0.6
GABPB1-202ENST00000359031 IP6K1Q92551 441 aa18.82■□□□□ 0.6
GABPB1-202ENST00000359031 MAP3K5Q99683 1374 aa18.81■□□□□ 0.6
GABPB1-202ENST00000359031 RGS12O14924 1447 aa18.81■□□□□ 0.6
GABPB1-202ENST00000359031 CAMTA1Q9Y6Y1 1673 aa18.8■□□□□ 0.6
GABPB1-202ENST00000359031 DCCP43146 1447 aa18.8■□□□□ 0.6
GABPB1-202ENST00000359031 MST1RQ04912 1400 aa18.8■□□□□ 0.6
GABPB1-202ENST00000359031 PTPRCP08575 1304 aa18.8■□□□□ 0.6
GABPB1-202ENST00000359031 FOXO3O43524 673 aa18.8■□□□□ 0.6
GABPB1-202ENST00000359031 TSPYL4Q9UJ04 414 aa18.79■□□□□ 0.6
GABPB1-202ENST00000359031 LMO7Q8WWI1 1683 aa18.79■□□□□ 0.6
GABPB1-202ENST00000359031 C1orf167Q5SNV9 1468 aa18.79■□□□□ 0.6
GABPB1-202ENST00000359031 GNAT3A8MTJ3 354 aa18.78■□□□□ 0.6
GABPB1-202ENST00000359031 C8orf37Q96NL8 207 aa18.78■□□□□ 0.6
GABPB1-202ENST00000359031 ALS2Q96Q42 1657 aa18.78■□□□□ 0.6
GABPB1-202ENST00000359031 RGPD2P0DJD1 1756 aa18.78■□□□□ 0.6
GABPB1-202ENST00000359031 SOS1Q07889 1333 aaPredicted RBP18.78■□□□□ 0.6
GABPB1-202ENST00000359031 BABAM1Q9NWV8 329 aa18.78■□□□□ 0.6
GABPB1-202ENST00000359031 N4BP2Q86UW6 1770 aaPredicted RBP18.77■□□□□ 0.6
GABPB1-202ENST00000359031 CACNA1FO60840 1977 aa18.77■□□□□ 0.6
GABPB1-202ENST00000359031 INTS3Q68E01 1043 aaKnown RBP18.77■□□□□ 0.6
GABPB1-202ENST00000359031 NCAPD2Q15021 1401 aa18.77■□□□□ 0.59
GABPB1-202ENST00000359031 USP19O94966 1318 aa18.76■□□□□ 0.59
GABPB1-202ENST00000359031 NUCB1Q02818 461 aa18.76■□□□□ 0.59
GABPB1-202ENST00000359031 KRT24Q2M2I5 525 aa18.76■□□□□ 0.59
GABPB1-202ENST00000359031 LRRC59Q96AG4 307 aaKnown RBP18.76■□□□□ 0.59
GABPB1-202ENST00000359031 GCC1Q96CN9 775 aa18.76■□□□□ 0.59
GABPB1-202ENST00000359031 LTV1Q96GA3 475 aaPredicted RBP18.75■□□□□ 0.59
GABPB1-202ENST00000359031 ORAI2Q96SN7 254 aa18.75■□□□□ 0.59
GABPB1-202ENST00000359031 QTRT2Q9H974 415 aaKnown RBP18.74■□□□□ 0.59
GABPB1-202ENST00000359031 KDM3BQ7LBC6 1761 aa18.73■□□□□ 0.59
GABPB1-202ENST00000359031 RBM6P78332 1123 aaKnown RBP18.73■□□□□ 0.59
GABPB1-202ENST00000359031 NHSL1Q5SYE7 1610 aa18.73■□□□□ 0.59
GABPB1-202ENST00000359031 CHD1LQ86WJ1 897 aa18.71■□□□□ 0.59
GABPB1-202ENST00000359031 DDX17Q92841 729 aaKnown RBP18.71■□□□□ 0.59
GABPB1-202ENST00000359031 UPF2Q9HAU5 1272 aaKnown RBP18.71■□□□□ 0.59
GABPB1-202ENST00000359031 CEMIPQ8WUJ3 1361 aa18.71■□□□□ 0.58
GABPB1-202ENST00000359031 ARHGEF25Q86VW2 580 aa18.71■□□□□ 0.58
GABPB1-202ENST00000359031 MIS18AQ9NYP9 233 aa18.71■□□□□ 0.58
GABPB1-202ENST00000359031 ATP10DQ9P241 1426 aa18.7■□□□□ 0.58
GABPB1-202ENST00000359031 ADAMTS2O95450 1211 aa18.7■□□□□ 0.58
GABPB1-202ENST00000359031 GCP02774 474 aa18.7■□□□□ 0.58
GABPB1-202ENST00000359031 C1orf115Q9H7X2 142 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms