RNA–Protein interactions for RNA: ENST00000359013.4

TGFBR2-202, Transcript of transforming growth factor beta receptor 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TGFBR2, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR2-202ENST00000359013 SCAND2PQ9GZW5 306 aaPredicted RBP18.38■□□□□ 0.53
TGFBR2-202ENST00000359013 GBP3Q9H0R5 595 aa18.38■□□□□ 0.53
TGFBR2-202ENST00000359013 SNX21Q969T3 373 aa18.37■□□□□ 0.53
TGFBR2-202ENST00000359013 GOLGA6L10A6NI86 522 aa18.37■□□□□ 0.53
TGFBR2-202ENST00000359013 LRRFIP2Q9Y608 721 aaKnown RBP18.37■□□□□ 0.53
TGFBR2-202ENST00000359013 ZSCAN12O43309 604 aa18.37■□□□□ 0.53
TGFBR2-202ENST00000359013 SNW1Q13573 536 aaKnown RBP18.37■□□□□ 0.53
TGFBR2-202ENST00000359013 DDX11Q96FC9 970 aa18.37■□□□□ 0.53
TGFBR2-202ENST00000359013 FEZ1Q99689 392 aa18.37■□□□□ 0.53
TGFBR2-202ENST00000359013 SHTN1A0MZ66 631 aa18.37■□□□□ 0.53
TGFBR2-202ENST00000359013 MNAT1P51948 309 aa18.37■□□□□ 0.53
TGFBR2-202ENST00000359013 WASHC4Q2M389 1173 aa18.37■□□□□ 0.53
TGFBR2-202ENST00000359013 TXLNBQ8N3L3 684 aa18.37■□□□□ 0.53
TGFBR2-202ENST00000359013 OGFRQ9NZT2 677 aa18.37■□□□□ 0.53
TGFBR2-202ENST00000359013 SMC5Q8IY18 1101 aa18.36■□□□□ 0.53
TGFBR2-202ENST00000359013 JMYQ8N9B5 988 aa18.36■□□□□ 0.53
TGFBR2-202ENST00000359013 STK11IPQ8N1F8 1099 aa18.36■□□□□ 0.53
TGFBR2-202ENST00000359013 DDX54Q8TDD1 881 aaKnown RBP18.36■□□□□ 0.53
TGFBR2-202ENST00000359013 SMTNL1A8MU46 457 aa18.35■□□□□ 0.53
TGFBR2-202ENST00000359013 SRCIN1Q9C0H9 1055 aa18.35■□□□□ 0.53
TGFBR2-202ENST00000359013 RBSNQ9H1K0 784 aa18.35■□□□□ 0.53
TGFBR2-202ENST00000359013 ANO10Q9NW15 660 aa18.35■□□□□ 0.53
TGFBR2-202ENST00000359013 TMX1Q9H3N1 280 aa18.35■□□□□ 0.53
TGFBR2-202ENST00000359013 HIP1O00291 1037 aa18.35■□□□□ 0.53
TGFBR2-202ENST00000359013 TMPOP42166 694 aaKnown RBP18.35■□□□□ 0.53
TGFBR2-202ENST00000359013 TERF1P54274 439 aa18.35■□□□□ 0.53
TGFBR2-202ENST00000359013 UBE2HP62256 183 aa18.35■□□□□ 0.53
TGFBR2-202ENST00000359013 ERICH3Q5RHP9 1530 aa18.35■□□□□ 0.53
TGFBR2-202ENST00000359013 U2AF2P26368 475 aaKnown RBP eCLIP18.34■□□□□ 0.532e-9■■■□□ 15
TGFBR2-202ENST00000359013 TFIP11Q9UBB9 837 aaKnown RBP18.34■□□□□ 0.53
TGFBR2-202ENST00000359013 TIAM1Q13009 1591 aa18.34■□□□□ 0.53
TGFBR2-202ENST00000359013 KIF4BQ2VIQ3 1234 aa18.34■□□□□ 0.53
TGFBR2-202ENST00000359013 CASQ1P31415 396 aa18.34■□□□□ 0.53
TGFBR2-202ENST00000359013 DDX58O95786 925 aaKnown RBP18.34■□□□□ 0.53
TGFBR2-202ENST00000359013 CCDC181Q5TID7 509 aa18.34■□□□□ 0.53
TGFBR2-202ENST00000359013 ZNF428Q96B54 188 aa18.33■□□□□ 0.53
TGFBR2-202ENST00000359013 NCAPD3P42695 1498 aa18.33■□□□□ 0.52
TGFBR2-202ENST00000359013 DHX16O60231 1041 aaKnown RBP18.33■□□□□ 0.52
TGFBR2-202ENST00000359013 CCT4P50991 539 aaKnown RBP18.33■□□□□ 0.52
TGFBR2-202ENST00000359013 DNAAF4Q8WXU2 420 aa18.33■□□□□ 0.52
TGFBR2-202ENST00000359013 STX6O43752 255 aa18.32■□□□□ 0.52
TGFBR2-202ENST00000359013 PDIA4P13667 645 aaKnown RBP18.32■□□□□ 0.52
TGFBR2-202ENST00000359013 ODF2Q5BJF6 829 aa18.32■□□□□ 0.52
TGFBR2-202ENST00000359013 C10orf67Q8IYJ2 551 aa18.32■□□□□ 0.52
TGFBR2-202ENST00000359013 SCAPERQ9BY12 1400 aa18.32■□□□□ 0.52
TGFBR2-202ENST00000359013 ZNHIT6Q9NWK9 470 aaKnown RBP18.32■□□□□ 0.52
TGFBR2-202ENST00000359013 FANCD2Q9BXW9 1451 aa18.32■□□□□ 0.52
TGFBR2-202ENST00000359013 EPB41L2O43491 1005 aaKnown RBP18.32■□□□□ 0.52
TGFBR2-202ENST00000359013 TMX3Q96JJ7 454 aa18.32■□□□□ 0.52
TGFBR2-202ENST00000359013 ZSWIM4Q9H7M6 989 aa18.32■□□□□ 0.52
TGFBR2-202ENST00000359013 ANKRD30BQ9BXX2 1392 aa18.32■□□□□ 0.52
TGFBR2-202ENST00000359013 FGD5Q6ZNL6 1462 aa18.32■□□□□ 0.52
TGFBR2-202ENST00000359013 CCDC30Q5VVM6 783 aa18.32■□□□□ 0.52
TGFBR2-202ENST00000359013 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.32■□□□□ 0.52
TGFBR2-202ENST00000359013 TSC1Q92574 1164 aa18.32■□□□□ 0.52
TGFBR2-202ENST00000359013 GOLGA6L7A0A1B0GV03 622 aa18.31■□□□□ 0.52
TGFBR2-202ENST00000359013 SKILP12757 684 aa18.31■□□□□ 0.52
TGFBR2-202ENST00000359013 VPS53Q5VIR6 699 aa18.31■□□□□ 0.52
TGFBR2-202ENST00000359013 AIMP1Q12904 312 aaKnown RBP18.31■□□□□ 0.52
TGFBR2-202ENST00000359013 SMARCC1Q92922 1105 aaPredicted RBP18.31■□□□□ 0.52
TGFBR2-202ENST00000359013 DDX19AQ9NUU7 478 aaKnown RBP18.31■□□□□ 0.52
TGFBR2-202ENST00000359013 LIMCH1Q9UPQ0 1083 aa18.31■□□□□ 0.52
TGFBR2-202ENST00000359013 PRXQ9BXM0 1461 aa18.31■□□□□ 0.52
TGFBR2-202ENST00000359013 GSDMDP57764 484 aa18.31■□□□□ 0.52
TGFBR2-202ENST00000359013 USP48Q86UV5 1035 aa18.31■□□□□ 0.52
TGFBR2-202ENST00000359013 ERICH2A1L162 156 aa18.3■□□□□ 0.52
TGFBR2-202ENST00000359013 C1orf141Q5JVX7 400 aa18.3■□□□□ 0.52
TGFBR2-202ENST00000359013 THUMPD2Q9BTF0 503 aaKnown RBP18.3■□□□□ 0.52
TGFBR2-202ENST00000359013 FAM107BQ9H098 131 aa18.3■□□□□ 0.52
TGFBR2-202ENST00000359013 MX1P20591 662 aa18.3■□□□□ 0.52
TGFBR2-202ENST00000359013 TMC6Q7Z403 805 aa18.3■□□□□ 0.52
TGFBR2-202ENST00000359013 ZNF397Q8NF99 534 aaPredicted RBP18.3■□□□□ 0.52
TGFBR2-202ENST00000359013 MYRIPQ8NFW9 859 aa18.3■□□□□ 0.52
TGFBR2-202ENST00000359013 RSPH14Q9UHP6 348 aa18.3■□□□□ 0.52
TGFBR2-202ENST00000359013 PLEKHH1Q9ULM0 1364 aa18.3■□□□□ 0.52
TGFBR2-202ENST00000359013 TOP1P11387 765 aaKnown RBP18.3■□□□□ 0.52
TGFBR2-202ENST00000359013 NUTM1Q86Y26 1132 aa18.3■□□□□ 0.52
TGFBR2-202ENST00000359013 DACH1Q9UI36 760 aa18.29■□□□□ 0.52
TGFBR2-202ENST00000359013 CCDC171Q6TFL3 1326 aa18.29■□□□□ 0.52
TGFBR2-202ENST00000359013 SLU7O95391 586 aaKnown RBP18.29■□□□□ 0.52
TGFBR2-202ENST00000359013 PRPF40BQ6NWY9 871 aaKnown RBP18.29■□□□□ 0.52
TGFBR2-202ENST00000359013 KIF5CO60282 957 aa18.29■□□□□ 0.52
TGFBR2-202ENST00000359013 C17orf53Q8N3J3 647 aaPredicted RBP18.29■□□□□ 0.52
TGFBR2-202ENST00000359013 MAPKBP1O60336 1514 aa18.28■□□□□ 0.52
TGFBR2-202ENST00000359013 ARFGAP3Q9NP61 516 aa18.28■□□□□ 0.52
TGFBR2-202ENST00000359013 RNF187Q5TA31 235 aaPredicted RBP18.28■□□□□ 0.52
TGFBR2-202ENST00000359013 FAM200AQ8TCP9 573 aa18.28■□□□□ 0.52
TGFBR2-202ENST00000359013 DHX29Q7Z478 1369 aaKnown RBP18.27■□□□□ 0.52
TGFBR2-202ENST00000359013 PTGS1P23219 599 aa18.27■□□□□ 0.52
TGFBR2-202ENST00000359013 CNPY2Q9Y2B0 182 aa18.27■□□□□ 0.52
TGFBR2-202ENST00000359013 HDAC1Q13547 482 aaPredicted RBP18.27■□□□□ 0.52
TGFBR2-202ENST00000359013 TICAM2Q86XR7 235 aa18.27■□□□□ 0.52
TGFBR2-202ENST00000359013 RASSF4Q9H2L5 321 aa18.27■□□□□ 0.52
TGFBR2-202ENST00000359013 MAGEC2Q9UBF1 373 aaPredicted RBP18.27■□□□□ 0.52
TGFBR2-202ENST00000359013 PIP4K2AP48426 406 aaPredicted RBP18.27■□□□□ 0.52
TGFBR2-202ENST00000359013 NUCB1Q02818 461 aa18.27■□□□□ 0.52
TGFBR2-202ENST00000359013 MCM6Q14566 821 aa18.27■□□□□ 0.52
TGFBR2-202ENST00000359013 SRGAP3O43295 1099 aa18.27■□□□□ 0.51
TGFBR2-202ENST00000359013 RIOK3O14730 519 aaKnown RBP18.26■□□□□ 0.51
TGFBR2-202ENST00000359013 GNG11P61952 73 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms