RNA–Protein interactions for RNA: ENST00000358779.9

CDK11A-204, Transcript of cyclin dependent kinase 11A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK11A, Length 2,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-204ENST00000358779 ANKRD44Q8N8A2 993 aa22.11■■□□□ 1.13
CDK11A-204ENST00000358779 USP31Q70CQ4 1352 aa22.11■■□□□ 1.13
CDK11A-204ENST00000358779 PLEKHG1Q9ULL1 1385 aa22.1■■□□□ 1.13
CDK11A-204ENST00000358779 CD2BP2O95400 341 aaKnown RBP22.1■■□□□ 1.13
CDK11A-204ENST00000358779 HSP90AB2PQ58FF8 381 aa22.1■■□□□ 1.13
CDK11A-204ENST00000358779 PTPRCP08575 1304 aa22.09■■□□□ 1.13
CDK11A-204ENST00000358779 NUTM2FA1L443 756 aa22.09■■□□□ 1.13
CDK11A-204ENST00000358779 CRB1P82279 1406 aa22.09■■□□□ 1.13
CDK11A-204ENST00000358779 RIMS1Q86UR5 1692 aaKnown RBP22.09■■□□□ 1.13
CDK11A-204ENST00000358779 K7ELQ4 463 aaPredicted RBP22.09■■□□□ 1.13
CDK11A-204ENST00000358779 TTC22Q5TAA0 569 aa22.09■■□□□ 1.13
CDK11A-204ENST00000358779 TNPO1Q92973 898 aaKnown RBP22.09■■□□□ 1.13
CDK11A-204ENST00000358779 ARXQ96QS3 562 aa22.08■■□□□ 1.13
CDK11A-204ENST00000358779 RAB3GAP1Q15042 981 aa22.08■■□□□ 1.12
CDK11A-204ENST00000358779 CEP85Q6P2H3 762 aa22.08■■□□□ 1.12
CDK11A-204ENST00000358779 RPAP2Q8IXW5 612 aaPredicted RBP22.08■■□□□ 1.12
CDK11A-204ENST00000358779 RTL1A6NKG5 1358 aa22.08■■□□□ 1.12
CDK11A-204ENST00000358779 ARHGEF10O15013 1369 aa22.08■■□□□ 1.12
CDK11A-204ENST00000358779 RBM42Q9BTD8 480 aaKnown RBP22.07■■□□□ 1.12
CDK11A-204ENST00000358779 SSH2Q76I76 1423 aa22.07■■□□□ 1.12
CDK11A-204ENST00000358779 EIF5BO60841 1220 aaKnown RBP22.07■■□□□ 1.12
CDK11A-204ENST00000358779 HSP90AA1P07900 732 aaKnown RBP22.07■■□□□ 1.12
CDK11A-204ENST00000358779 XRCC6P12956 609 aaKnown RBP eCLIP22.07■■□□□ 1.12
CDK11A-204ENST00000358779 ANO8Q9HCE9 1232 aaPredicted RBP22.06■■□□□ 1.12
CDK11A-204ENST00000358779 PTPRUQ92729 1446 aa22.05■■□□□ 1.12
CDK11A-204ENST00000358779 GBP4Q96PP9 640 aa22.05■■□□□ 1.12
CDK11A-204ENST00000358779 LTKP29376 864 aa22.05■■□□□ 1.12
CDK11A-204ENST00000358779 C16orf71Q8IYS4 520 aaPredicted RBP22.05■■□□□ 1.12
CDK11A-204ENST00000358779 SOX12O15370 315 aa22.04■■□□□ 1.12
CDK11A-204ENST00000358779 MAP3K19Q56UN5 1328 aa22.04■■□□□ 1.12
CDK11A-204ENST00000358779 MEIS3Q99687 375 aa22.04■■□□□ 1.12
CDK11A-204ENST00000358779 FOXD4L1Q9NU39 408 aa22.04■■□□□ 1.12
CDK11A-204ENST00000358779 TTC21AQ8NDW8 1320 aa22.02■■□□□ 1.12
CDK11A-204ENST00000358779 OTUD7AQ8TE49 926 aaPredicted RBP22.02■■□□□ 1.12
CDK11A-204ENST00000358779 FLT4P35916 1363 aa22.01■■□□□ 1.11
CDK11A-204ENST00000358779 SLC4A2P04920 1241 aa22.01■■□□□ 1.11
CDK11A-204ENST00000358779 GAS2L2Q8NHY3 880 aa22.01■■□□□ 1.11
CDK11A-204ENST00000358779 SBNO1A3KN83 1393 aa22.01■■□□□ 1.11
CDK11A-204ENST00000358779 RABEP1Q15276 862 aa22■■□□□ 1.11
CDK11A-204ENST00000358779 RGPD8O14715 1765 aaPredicted RBP22■■□□□ 1.11
CDK11A-204ENST00000358779 PANK2Q9BZ23 570 aa22■■□□□ 1.11
CDK11A-204ENST00000358779 FOXO3O43524 673 aa21.99■■□□□ 1.11
CDK11A-204ENST00000358779 SMARCA5O60264 1052 aaPredicted RBP21.99■■□□□ 1.11
CDK11A-204ENST00000358779 MTHFSDQ2M296 383 aaKnown RBP21.99■■□□□ 1.11
CDK11A-204ENST00000358779 MIS18AQ9NYP9 233 aa21.99■■□□□ 1.11
CDK11A-204ENST00000358779 TSPYL4Q9UJ04 414 aa21.99■■□□□ 1.11
CDK11A-204ENST00000358779 PTMSP20962 102 aa21.99■■□□□ 1.11
CDK11A-204ENST00000358779 KDRP35968 1356 aa21.99■■□□□ 1.11
CDK11A-204ENST00000358779 MRE11P49959 708 aa21.99■■□□□ 1.11
CDK11A-204ENST00000358779 RTF1Q92541 710 aaKnown RBP21.99■■□□□ 1.11
CDK11A-204ENST00000358779 SLC26A8Q96RN1 970 aa21.99■■□□□ 1.11
CDK11A-204ENST00000358779 PIK3C2AO00443 1686 aa21.98■■□□□ 1.11
CDK11A-204ENST00000358779 LRRC37A3O60309 1634 aa21.98■■□□□ 1.11
CDK11A-204ENST00000358779 DIP2AQ14689 1571 aa21.98■■□□□ 1.11
CDK11A-204ENST00000358779 CEP170BQ9Y4F5 1589 aaPredicted RBP21.98■■□□□ 1.11
CDK11A-204ENST00000358779 APBB1O00213 710 aa21.98■■□□□ 1.11
CDK11A-204ENST00000358779 SDSP20132 328 aa21.98■■□□□ 1.11
CDK11A-204ENST00000358779 USP26Q9BXU7 913 aa21.98■■□□□ 1.11
CDK11A-204ENST00000358779 ISY1Q9ULR0 285 aaKnown RBP21.97■■□□□ 1.11
CDK11A-204ENST00000358779 FAM208AQ9UK61 1670 aaKnown RBP21.97■■□□□ 1.11
CDK11A-204ENST00000358779 CASC1Q6TDU7 716 aa21.96■■□□□ 1.11
CDK11A-204ENST00000358779 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.96■■□□□ 1.11
CDK11A-204ENST00000358779 HMMRO75330 724 aa21.96■■□□□ 1.11
CDK11A-204ENST00000358779 SKOR2Q2VWA4 1001 aaPredicted RBP21.96■■□□□ 1.11
CDK11A-204ENST00000358779 G2E3Q7L622 706 aa21.96■■□□□ 1.11
CDK11A-204ENST00000358779 RRAGDQ9NQL2 400 aaPredicted RBP21.96■■□□□ 1.11
CDK11A-204ENST00000358779 IGSF1Q8N6C5 1336 aa21.95■■□□□ 1.1
CDK11A-204ENST00000358779 SSFA2P28290 1259 aa21.95■■□□□ 1.1
CDK11A-204ENST00000358779 CCT4P50991 539 aaKnown RBP21.95■■□□□ 1.1
CDK11A-204ENST00000358779 GRPEL1Q9HAV7 217 aa21.95■■□□□ 1.1
CDK11A-204ENST00000358779 AMOTL2Q9Y2J4 779 aa21.95■■□□□ 1.1
CDK11A-204ENST00000358779 EID1Q9Y6B2 187 aa21.95■■□□□ 1.1
CDK11A-204ENST00000358779 SLIT1O75093 1534 aa21.94■■□□□ 1.1
CDK11A-204ENST00000358779 AK9Q5TCS8 1911 aa21.94■■□□□ 1.1
CDK11A-204ENST00000358779 SLC4A10Q6U841 1118 aa21.94■■□□□ 1.1
CDK11A-204ENST00000358779 F6X3S4 739 aa21.94■■□□□ 1.1
CDK11A-204ENST00000358779 EYA1Q99502 592 aa21.93■■□□□ 1.1
CDK11A-204ENST00000358779 ARHGAP23Q9P227 1491 aa21.93■■□□□ 1.1
CDK11A-204ENST00000358779 AMPHP49418 695 aa21.92■■□□□ 1.1
CDK11A-204ENST00000358779 NGDNQ8NEJ9 315 aaKnown RBP21.92■■□□□ 1.1
CDK11A-204ENST00000358779 XRN1Q8IZH2 1706 aaKnown RBP21.92■■□□□ 1.1
CDK11A-204ENST00000358779 CLEC17AQ6ZS10 378 aa21.92■■□□□ 1.1
CDK11A-204ENST00000358779 TUBGCP6Q96RT7 1819 aa21.91■■□□□ 1.1
CDK11A-204ENST00000358779 MARF1Q9Y4F3 1742 aaKnown RBP21.91■■□□□ 1.1
CDK11A-204ENST00000358779 N4BP2Q86UW6 1770 aaPredicted RBP21.9■■□□□ 1.1
CDK11A-204ENST00000358779 PRKCSHP14314 528 aaPredicted RBP21.9■■□□□ 1.1
CDK11A-204ENST00000358779 CEBPAP49715 358 aaPredicted RBP21.9■■□□□ 1.1
CDK11A-204ENST00000358779 STK31Q9BXU1 1019 aa21.9■■□□□ 1.1
CDK11A-204ENST00000358779 GOLGA6L22H0YM25 854 aa21.89■■□□□ 1.1
CDK11A-204ENST00000358779 REC8O95072 547 aa21.89■■□□□ 1.1
CDK11A-204ENST00000358779 OSBPL3Q9H4L5 887 aa21.89■■□□□ 1.1
CDK11A-204ENST00000358779 TBX22Q9Y458 520 aa21.89■■□□□ 1.09
CDK11A-204ENST00000358779 CACNA1FO60840 1977 aa21.89■■□□□ 1.09
CDK11A-204ENST00000358779 GNAI2P04899 355 aa21.88■■□□□ 1.09
CDK11A-204ENST00000358779 HTATSF1O43719 755 aaKnown RBP21.88■■□□□ 1.09
CDK11A-204ENST00000358779 BAG4O95429 457 aaKnown RBP21.88■■□□□ 1.09
CDK11A-204ENST00000358779 PDE1AP54750 535 aa21.88■■□□□ 1.09
CDK11A-204ENST00000358779 USP54Q70EL1 1684 aa21.88■■□□□ 1.09
CDK11A-204ENST00000358779 ERC2O15083 957 aa21.87■■□□□ 1.09
CDK11A-204ENST00000358779 NWD1Q149M9 1564 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 461 ms