RNA–Protein interactions for RNA: ENST00000358543.8

ALKAL1-201, Transcript of ALK and LTK ligand 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALKAL1, Length 1,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKAL1-201ENST00000358543 U2SURPO15042 1029 aaKnown RBP32.54■■■□□ 2.8
ALKAL1-201ENST00000358543 AEBP1Q8IUX7 1158 aa32.54■■■□□ 2.8
ALKAL1-201ENST00000358543 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP32.54■■■□□ 2.8
ALKAL1-201ENST00000358543 MARCH10Q8NA82 808 aaPredicted RBP32.52■■■□□ 2.8
ALKAL1-201ENST00000358543 FAM196AQ6ZSG2 479 aa32.5■■■□□ 2.79
ALKAL1-201ENST00000358543 HMOX1P09601 288 aa32.49■■■□□ 2.79
ALKAL1-201ENST00000358543 SPG7Q9UQ90 795 aa32.49■■■□□ 2.79
ALKAL1-201ENST00000358543 FAM182BQ5T319 152 aa32.48■■■□□ 2.79
ALKAL1-201ENST00000358543 BCL9O00512 1426 aa32.48■■■□□ 2.79
ALKAL1-201ENST00000358543 AMOTQ4VCS5 1084 aa32.47■■■□□ 2.79
ALKAL1-201ENST00000358543 U2AF1L5P0DN76 240 aaPredicted RBP32.46■■■□□ 2.79
ALKAL1-201ENST00000358543 U2AF1Q01081 240 aaKnown RBP eCLIP32.46■■■□□ 2.79
ALKAL1-201ENST00000358543 PCDH11XQ9BZA7 1347 aa32.46■■■□□ 2.79
ALKAL1-201ENST00000358543 PCDH11YQ9BZA8 1340 aa32.46■■■□□ 2.79
ALKAL1-201ENST00000358543 PLEKHO1Q53GL0 409 aaPredicted RBP32.45■■■□□ 2.79
ALKAL1-201ENST00000358543 DDX54Q8TDD1 881 aaKnown RBP32.45■■■□□ 2.79
ALKAL1-201ENST00000358543 PKD1L3Q7Z443 1732 aa32.45■■■□□ 2.78
ALKAL1-201ENST00000358543 FCHSD2O94868 740 aa32.44■■■□□ 2.78
ALKAL1-201ENST00000358543 SHANK3Q9BYB0 1731 aa32.43■■■□□ 2.78
ALKAL1-201ENST00000358543 RSPH6AQ9H0K4 717 aa32.42■■■□□ 2.78
ALKAL1-201ENST00000358543 EP400Q96L91 3159 aa32.41■■■□□ 2.78
ALKAL1-201ENST00000358543 SOCS7O14512 581 aa32.4■■■□□ 2.78
ALKAL1-201ENST00000358543 CYP27B1O15528 508 aa32.4■■■□□ 2.78
ALKAL1-201ENST00000358543 CCDC125Q86Z20 511 aa32.39■■■□□ 2.78
ALKAL1-201ENST00000358543 UPF1Q92900 1129 aaKnown RBP eCLIP32.39■■■□□ 2.78
ALKAL1-201ENST00000358543 IFNL2Q8IZJ0 200 aa32.38■■■□□ 2.77
ALKAL1-201ENST00000358543 DIEXFQ68CQ4 756 aaKnown RBP32.37■■■□□ 2.77
ALKAL1-201ENST00000358543 PRKAR2BP31323 418 aa32.36■■■□□ 2.77
ALKAL1-201ENST00000358543 NKX1-1Q15270 411 aaPredicted RBP32.36■■■□□ 2.77
ALKAL1-201ENST00000358543 PHKG2P15735 406 aa32.35■■■□□ 2.77
ALKAL1-201ENST00000358543 PNNQ9H307 717 aaKnown RBP32.35■■■□□ 2.77
ALKAL1-201ENST00000358543 CCDC184Q52MB2 194 aa32.33■■■□□ 2.77
ALKAL1-201ENST00000358543 ZNF530Q6P9A1 599 aaPredicted RBP32.33■■■□□ 2.77
ALKAL1-201ENST00000358543 WDR43Q15061 677 aaKnown RBP eCLIP32.32■■■□□ 2.76
ALKAL1-201ENST00000358543 MTHFSDQ2M296 383 aaKnown RBP32.32■■■□□ 2.76
ALKAL1-201ENST00000358543 TRIM37O94972 964 aa32.31■■■□□ 2.76
ALKAL1-201ENST00000358543 SBF2Q86WG5 1849 aa32.3■■■□□ 2.76
ALKAL1-201ENST00000358543 HSP90AB1P08238 724 aaKnown RBP32.3■■■□□ 2.76
ALKAL1-201ENST00000358543 PHACTR3Q96KR7 559 aa32.3■■■□□ 2.76
ALKAL1-201ENST00000358543 PLEKHF1Q96S99 279 aa32.3■■■□□ 2.76
ALKAL1-201ENST00000358543 BCL11BQ9C0K0 894 aaPredicted RBP32.3■■■□□ 2.76
ALKAL1-201ENST00000358543 C1orf141Q5JVX7 400 aa32.29■■■□□ 2.76
ALKAL1-201ENST00000358543 GAS2L2Q8NHY3 880 aa32.29■■■□□ 2.76
ALKAL1-201ENST00000358543 MRS2Q9HD23 443 aa32.29■■■□□ 2.76
ALKAL1-201ENST00000358543 AKAP4Q5JQC9 854 aa32.28■■■□□ 2.76
ALKAL1-201ENST00000358543 ADAMTS8Q9UP79 889 aa32.27■■■□□ 2.76
ALKAL1-201ENST00000358543 NEFMP07197 916 aa32.26■■■□□ 2.75
ALKAL1-201ENST00000358543 SF3B2Q13435 895 aaKnown RBP32.26■■■□□ 2.75
ALKAL1-201ENST00000358543 ACSBG1Q96GR2 724 aa32.26■■■□□ 2.75
ALKAL1-201ENST00000358543 DCAF5Q96JK2 942 aa32.26■■■□□ 2.75
ALKAL1-201ENST00000358543 PNISRQ8TF01 805 aaKnown RBP32.25■■■□□ 2.75
ALKAL1-201ENST00000358543 KAT6BQ8WYB5 2073 aa32.25■■■□□ 2.75
ALKAL1-201ENST00000358543 KCNQ2O43526 872 aa32.24■■■□□ 2.75
ALKAL1-201ENST00000358543 NHSQ6T4R5 1651 aa32.22■■■□□ 2.75
ALKAL1-201ENST00000358543 PRIM1P49642 420 aaKnown RBP32.22■■■□□ 2.75
ALKAL1-201ENST00000358543 ERVV-2B6SEH9 535 aa32.2■■■□□ 2.75
ALKAL1-201ENST00000358543 PTF1AQ7RTS3 328 aa32.2■■■□□ 2.75
ALKAL1-201ENST00000358543 CCER2I3L3R5 266 aa32.19■■■□□ 2.74
ALKAL1-201ENST00000358543 DOT1LQ8TEK3 1739 aa32.19■■■□□ 2.74
ALKAL1-201ENST00000358543 TNS1Q9HBL0 1735 aaKnown RBP32.19■■■□□ 2.74
ALKAL1-201ENST00000358543 MAPK8IP3Q9UPT6 1336 aa32.19■■■□□ 2.74
ALKAL1-201ENST00000358543 GNAT3A8MTJ3 354 aa32.18■■■□□ 2.74
ALKAL1-201ENST00000358543 APBA3O96018 575 aa32.18■■■□□ 2.74
ALKAL1-201ENST00000358543 MPRIPQ6WCQ1 1025 aa32.18■■■□□ 2.74
ALKAL1-201ENST00000358543 KDM6AO15550 1401 aaPredicted RBP32.17■■■□□ 2.74
ALKAL1-201ENST00000358543 BAG6P46379 1132 aa32.17■■■□□ 2.74
ALKAL1-201ENST00000358543 SYTL4Q96C24 671 aaPredicted RBP32.17■■■□□ 2.74
ALKAL1-201ENST00000358543 RUNDC1Q96C34 613 aa32.17■■■□□ 2.74
ALKAL1-201ENST00000358543 MAP3K5Q99683 1374 aa32.17■■■□□ 2.74
ALKAL1-201ENST00000358543 TOGARAM1Q9Y4F4 1720 aa32.15■■■□□ 2.74
ALKAL1-201ENST00000358543 PLSCR1O15162 318 aa32.15■■■□□ 2.74
ALKAL1-201ENST00000358543 HTATSF1O43719 755 aaKnown RBP32.14■■■□□ 2.74
ALKAL1-201ENST00000358543 NFE2L2Q16236 605 aa32.14■■■□□ 2.74
ALKAL1-201ENST00000358543 RNMTO43148 476 aaKnown RBP32.13■■■□□ 2.73
ALKAL1-201ENST00000358543 CCDC146Q8IYE0 955 aa32.12■■■□□ 2.73
ALKAL1-201ENST00000358543 LGR6Q9HBX8 967 aa32.12■■■□□ 2.73
ALKAL1-201ENST00000358543 ITGB4P16144 1822 aa32.12■■■□□ 2.73
ALKAL1-201ENST00000358543 ADAMTS7Q9UKP4 1686 aa32.11■■■□□ 2.73
ALKAL1-201ENST00000358543 PIGBQ92521 554 aa32.11■■■□□ 2.73
ALKAL1-201ENST00000358543 TMOD3Q9NYL9 352 aa32.11■■■□□ 2.73
ALKAL1-201ENST00000358543 SCN11AQ9UI33 1791 aa32.11■■■□□ 2.73
ALKAL1-201ENST00000358543 BTAF1O14981 1849 aa32.1■■■□□ 2.73
ALKAL1-201ENST00000358543 CABP4P57796 275 aa32.1■■■□□ 2.73
ALKAL1-201ENST00000358543 DEFB132Q7Z7B7 95 aa32.1■■■□□ 2.73
ALKAL1-201ENST00000358543 MIER1Q8N108 512 aa32.1■■■□□ 2.73
ALKAL1-201ENST00000358543 IL17REQ8NFR9 667 aa32.1■■■□□ 2.73
ALKAL1-201ENST00000358543 EN1Q05925 392 aaPredicted RBP32.09■■■□□ 2.73
ALKAL1-201ENST00000358543 RTF1Q92541 710 aaKnown RBP32.09■■■□□ 2.73
ALKAL1-201ENST00000358543 CAMKK2Q96RR4 588 aa32.09■■■□□ 2.73
ALKAL1-201ENST00000358543 TMPOP42166 694 aaKnown RBP32.08■■■□□ 2.73
ALKAL1-201ENST00000358543 SLC52A2Q9HAB3 445 aa32.07■■■□□ 2.72
ALKAL1-201ENST00000358543 CEMIPQ8WUJ3 1361 aa32.07■■■□□ 2.72
ALKAL1-201ENST00000358543 NFATC2IPQ8NCF5 419 aa32.06■■■□□ 2.72
ALKAL1-201ENST00000358543 RGPD3A6NKT7 1758 aaPredicted RBP32.04■■■□□ 2.72
ALKAL1-201ENST00000358543 RGPD4Q7Z3J3 1758 aa32.04■■■□□ 2.72
ALKAL1-201ENST00000358543 MRC1P22897 1456 aa32.04■■■□□ 2.72
ALKAL1-201ENST00000358543 RIPK4P57078 832 aa32.04■■■□□ 2.72
ALKAL1-201ENST00000358543 VIRMAQ69YN4 1812 aaKnown RBP32.04■■■□□ 2.72
ALKAL1-201ENST00000358543 EZH2Q15910 746 aaKnown RBP32.03■■■□□ 2.72
ALKAL1-201ENST00000358543 FAM9BQ8IZU0 186 aa32.03■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms