RNA–Protein interactions for RNA: ENST00000358438.6

POLR2J2-202, Transcript of RNA polymerase II subunit J2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J2, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2-202ENST00000358438 DAXXQ9UER7 740 aaPredicted RBP28.47■■■□□ 2.15
POLR2J2-202ENST00000358438 TNS3Q68CZ2 1445 aa28.46■■■□□ 2.15
POLR2J2-202ENST00000358438 DCTN1Q14203 1278 aa28.46■■■□□ 2.15
POLR2J2-202ENST00000358438 CANXP27824 592 aaKnown RBP28.45■■■□□ 2.14
POLR2J2-202ENST00000358438 MTHFSDQ2M296 383 aaKnown RBP28.45■■■□□ 2.14
POLR2J2-202ENST00000358438 CFAP44Q96MT7 982 aa28.45■■■□□ 2.14
POLR2J2-202ENST00000358438 BCL2L13Q9BXK5 485 aa28.44■■■□□ 2.14
POLR2J2-202ENST00000358438 SLAIN2Q9P270 581 aa28.44■■■□□ 2.14
POLR2J2-202ENST00000358438 PDE3AQ14432 1141 aa28.44■■■□□ 2.14
POLR2J2-202ENST00000358438 GAS2L2Q8NHY3 880 aa28.42■■■□□ 2.14
POLR2J2-202ENST00000358438 MBIPQ9NS73 344 aa28.42■■■□□ 2.14
POLR2J2-202ENST00000358438 SPATA31A3Q5VYP0 1347 aa28.41■■■□□ 2.14
POLR2J2-202ENST00000358438 RGPD2P0DJD1 1756 aa28.41■■■□□ 2.14
POLR2J2-202ENST00000358438 NBPF6Q5VWK0 638 aa28.4■■■□□ 2.14
POLR2J2-202ENST00000358438 MCM10Q7L590 875 aa28.4■■■□□ 2.14
POLR2J2-202ENST00000358438 NBPF4Q96M43 638 aa28.4■■■□□ 2.14
POLR2J2-202ENST00000358438 USHBP1Q8N6Y0 703 aa28.39■■■□□ 2.14
POLR2J2-202ENST00000358438 CERKQ8TCT0 537 aa28.39■■■□□ 2.14
POLR2J2-202ENST00000358438 SMC4Q9NTJ3 1288 aa28.38■■■□□ 2.13
POLR2J2-202ENST00000358438 CRYBG1Q9Y4K1 1723 aa28.38■■■□□ 2.13
POLR2J2-202ENST00000358438 SSH1Q8WYL5 1049 aa28.38■■■□□ 2.13
POLR2J2-202ENST00000358438 ZC3H6P61129 1189 aaKnown RBP28.36■■■□□ 2.13
POLR2J2-202ENST00000358438 KDM2BQ8NHM5 1336 aa28.36■■■□□ 2.13
POLR2J2-202ENST00000358438 RGPD5Q99666 1765 aa28.36■■■□□ 2.13
POLR2J2-202ENST00000358438 RTF1Q92541 710 aaKnown RBP28.36■■■□□ 2.13
POLR2J2-202ENST00000358438 ZNF428Q96B54 188 aa28.36■■■□□ 2.13
POLR2J2-202ENST00000358438 AXIN2Q9Y2T1 843 aa28.36■■■□□ 2.13
POLR2J2-202ENST00000358438 FAM161AQ3B820 660 aa28.34■■■□□ 2.13
POLR2J2-202ENST00000358438 CENPQQ7L2Z9 268 aaPredicted RBP28.34■■■□□ 2.13
POLR2J2-202ENST00000358438 PANK1Q8TE04 598 aa28.34■■■□□ 2.13
POLR2J2-202ENST00000358438 ANKRD24Q8TF21 1146 aa28.34■■■□□ 2.13
POLR2J2-202ENST00000358438 LRRC59Q96AG4 307 aaKnown RBP28.34■■■□□ 2.13
POLR2J2-202ENST00000358438 CRB1P82279 1406 aa28.34■■■□□ 2.13
POLR2J2-202ENST00000358438 EIF5BO60841 1220 aaKnown RBP28.34■■■□□ 2.13
POLR2J2-202ENST00000358438 ALDH1L2Q3SY69 923 aa28.33■■■□□ 2.13
POLR2J2-202ENST00000358438 NCAPD2Q15021 1401 aa28.33■■■□□ 2.13
POLR2J2-202ENST00000358438 CAMTA1Q9Y6Y1 1673 aa28.33■■■□□ 2.13
POLR2J2-202ENST00000358438 SOS2Q07890 1332 aaPredicted RBP28.33■■■□□ 2.13
POLR2J2-202ENST00000358438 HTATSF1O43719 755 aaKnown RBP28.33■■■□□ 2.13
POLR2J2-202ENST00000358438 CABLES1Q8TDN4 633 aa28.33■■■□□ 2.13
POLR2J2-202ENST00000358438 CHL1O00533 1208 aa28.32■■■□□ 2.12
POLR2J2-202ENST00000358438 ZKSCAN2Q63HK3 967 aa28.32■■■□□ 2.12
POLR2J2-202ENST00000358438 VAMP4O75379 141 aa28.31■■■□□ 2.12
POLR2J2-202ENST00000358438 TSPYL6Q8N831 410 aa28.31■■■□□ 2.12
POLR2J2-202ENST00000358438 GNAT3A8MTJ3 354 aa28.31■■■□□ 2.12
POLR2J2-202ENST00000358438 LRRC37A3O60309 1634 aa28.3■■■□□ 2.12
POLR2J2-202ENST00000358438 UBAP1LF5GYI3 381 aa28.3■■■□□ 2.12
POLR2J2-202ENST00000358438 PIP4K2BP78356 416 aa28.3■■■□□ 2.12
POLR2J2-202ENST00000358438 COG6Q9Y2V7 657 aa28.3■■■□□ 2.12
POLR2J2-202ENST00000358438 COL18A1P39060 1754 aa28.3■■■□□ 2.12
POLR2J2-202ENST00000358438 MAP3K5Q99683 1374 aa28.29■■■□□ 2.12
POLR2J2-202ENST00000358438 ERBB3P21860 1342 aa28.29■■■□□ 2.12
POLR2J2-202ENST00000358438 RLBP1P12271 317 aa28.29■■■□□ 2.12
POLR2J2-202ENST00000358438 TNNQ9UQP3 1299 aa28.29■■■□□ 2.12
POLR2J2-202ENST00000358438 TWISTNBQ3B726 338 aaPredicted RBP28.28■■■□□ 2.12
POLR2J2-202ENST00000358438 C8orf58Q8NAV2 365 aa28.28■■■□□ 2.12
POLR2J2-202ENST00000358438 KIF16BQ96L93 1317 aa28.28■■■□□ 2.12
POLR2J2-202ENST00000358438 ABCC6O95255 1503 aa28.28■■■□□ 2.12
POLR2J2-202ENST00000358438 NHSL1Q5SYE7 1610 aa28.27■■■□□ 2.12
POLR2J2-202ENST00000358438 ELL2O00472 640 aaPredicted RBP28.27■■■□□ 2.12
POLR2J2-202ENST00000358438 TOM1O60784 492 aa28.27■■■□□ 2.12
POLR2J2-202ENST00000358438 CLUAP1Q96AJ1 413 aa28.27■■■□□ 2.12
POLR2J2-202ENST00000358438 BRPF1P55201 1214 aaPredicted RBP28.26■■■□□ 2.11
POLR2J2-202ENST00000358438 LMO7Q8WWI1 1683 aa28.26■■■□□ 2.11
POLR2J2-202ENST00000358438 CPDO75976 1380 aa28.25■■■□□ 2.11
POLR2J2-202ENST00000358438 NOB1Q9ULX3 412 aaKnown RBP28.25■■■□□ 2.11
POLR2J2-202ENST00000358438 TRIM27P14373 513 aa28.24■■■□□ 2.11
POLR2J2-202ENST00000358438 ATF7IPQ6VMQ6 1270 aa28.24■■■□□ 2.11
POLR2J2-202ENST00000358438 DZIP1LQ8IYY4 767 aaKnown RBP28.24■■■□□ 2.11
POLR2J2-202ENST00000358438 C8orf34Q49A92 452 aa28.23■■■□□ 2.11
POLR2J2-202ENST00000358438 FTSJ3Q8IY81 847 aaKnown RBP28.23■■■□□ 2.11
POLR2J2-202ENST00000358438 KIAA0232Q92628 1395 aa28.23■■■□□ 2.11
POLR2J2-202ENST00000358438 IPO8O15397 1037 aaKnown RBP28.22■■■□□ 2.11
POLR2J2-202ENST00000358438 IL17REQ8NFR9 667 aa28.22■■■□□ 2.11
POLR2J2-202ENST00000358438 TSPYL4Q9UJ04 414 aa28.2■■■□□ 2.11
POLR2J2-202ENST00000358438 FAM208AQ9UK61 1670 aaKnown RBP28.2■■■□□ 2.1
POLR2J2-202ENST00000358438 FRAT2O75474 233 aaPredicted RBP28.2■■■□□ 2.1
POLR2J2-202ENST00000358438 AAMPQ13685 434 aa28.2■■■□□ 2.1
POLR2J2-202ENST00000358438 CHRNA2Q15822 529 aa28.2■■■□□ 2.1
POLR2J2-202ENST00000358438 AMOTQ4VCS5 1084 aa28.2■■■□□ 2.1
POLR2J2-202ENST00000358438 PLEKHO1Q53GL0 409 aaPredicted RBP28.2■■■□□ 2.1
POLR2J2-202ENST00000358438 MRPL50Q8N5N7 158 aaKnown RBP28.2■■■□□ 2.1
POLR2J2-202ENST00000358438 MIS18AQ9NYP9 233 aa28.2■■■□□ 2.1
POLR2J2-202ENST00000358438 HAP1P54257 671 aaPredicted RBP28.19■■■□□ 2.1
POLR2J2-202ENST00000358438 MVPQ14764 893 aaKnown RBP28.19■■■□□ 2.1
POLR2J2-202ENST00000358438 VIRMAQ69YN4 1812 aaKnown RBP28.19■■■□□ 2.1
POLR2J2-202ENST00000358438 KRT24Q2M2I5 525 aa28.19■■■□□ 2.1
POLR2J2-202ENST00000358438 ROBO1Q9Y6N7 1651 aa28.18■■■□□ 2.1
POLR2J2-202ENST00000358438 ABCA3Q99758 1704 aa28.18■■■□□ 2.1
POLR2J2-202ENST00000358438 SLC4A3P48751 1232 aa28.18■■■□□ 2.1
POLR2J2-202ENST00000358438 CEMIPQ8WUJ3 1361 aa28.16■■■□□ 2.1
POLR2J2-202ENST00000358438 L1TD1Q5T7N2 865 aaKnown RBP28.16■■■□□ 2.1
POLR2J2-202ENST00000358438 ZNF530Q6P9A1 599 aaPredicted RBP28.16■■■□□ 2.1
POLR2J2-202ENST00000358438 NLRP2Q9NX02 1062 aa28.16■■■□□ 2.1
POLR2J2-202ENST00000358438 AKAP4Q5JQC9 854 aa28.15■■■□□ 2.1
POLR2J2-202ENST00000358438 ARHGAP45Q92619 1136 aa28.15■■■□□ 2.1
POLR2J2-202ENST00000358438 GLIPR1L2Q4G1C9 344 aa28.14■■■□□ 2.09
POLR2J2-202ENST00000358438 BABAM1Q9NWV8 329 aa28.14■■■□□ 2.09
POLR2J2-202ENST00000358438 CSB-PGBD3P0DP91 1061 aa28.13■■■□□ 2.09
POLR2J2-202ENST00000358438 TAF7Q15545 349 aaPredicted RBP28.13■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms