RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 CDR1P51861 262 aa18.44■□□□□ 0.54
TRAPPC11-202ENST00000357207 BRPF1P55201 1214 aaPredicted RBP18.44■□□□□ 0.54
TRAPPC11-202ENST00000357207 IQGAP2Q13576 1575 aa18.44■□□□□ 0.54
TRAPPC11-202ENST00000357207 LEKR1Q6ZMV7 388 aa18.44■□□□□ 0.54
TRAPPC11-202ENST00000357207 MAGI1Q96QZ7 1491 aaPredicted RBP18.44■□□□□ 0.54
TRAPPC11-202ENST00000357207 SCAND2PQ9GZW5 306 aaPredicted RBP18.44■□□□□ 0.54
TRAPPC11-202ENST00000357207 FAM69CQ0P6D2 419 aa18.43■□□□□ 0.54
TRAPPC11-202ENST00000357207 CAMK4Q16566 473 aa18.43■□□□□ 0.54
TRAPPC11-202ENST00000357207 ZNF530Q6P9A1 599 aaPredicted RBP18.43■□□□□ 0.54
TRAPPC11-202ENST00000357207 MCM10Q7L590 875 aa18.43■□□□□ 0.54
TRAPPC11-202ENST00000357207 FAM177A1Q8N128 213 aaPredicted RBP18.43■□□□□ 0.54
TRAPPC11-202ENST00000357207 PARD3Q8TEW0 1356 aa18.43■□□□□ 0.54
TRAPPC11-202ENST00000357207 ADGRF5Q8IZF2 1346 aa18.43■□□□□ 0.54
TRAPPC11-202ENST00000357207 MIS18AQ9NYP9 233 aa18.43■□□□□ 0.54
TRAPPC11-202ENST00000357207 PLEKHH1Q9ULM0 1364 aa18.42■□□□□ 0.54
TRAPPC11-202ENST00000357207 SNAPC4Q5SXM2 1469 aa18.42■□□□□ 0.54
TRAPPC11-202ENST00000357207 GDPD2Q9HCC8 539 aa18.42■□□□□ 0.54
TRAPPC11-202ENST00000357207 SCAF11Q99590 1463 aaKnown RBP18.42■□□□□ 0.54
TRAPPC11-202ENST00000357207 CBFA2T2O43439 604 aa18.41■□□□□ 0.54
TRAPPC11-202ENST00000357207 OFD1O75665 1012 aa18.41■□□□□ 0.54
TRAPPC11-202ENST00000357207 UBXN4Q92575 508 aa18.41■□□□□ 0.54
TRAPPC11-202ENST00000357207 SH2B1Q9NRF2 756 aaPredicted RBP18.41■□□□□ 0.54
TRAPPC11-202ENST00000357207 LIMCH1Q9UPQ0 1083 aa18.41■□□□□ 0.54
TRAPPC11-202ENST00000357207 H0YHG0 523 aa18.41■□□□□ 0.54
TRAPPC11-202ENST00000357207 RAB11FIP3O75154 756 aa18.41■□□□□ 0.54
TRAPPC11-202ENST00000357207 PIP4K2AP48426 406 aaPredicted RBP18.41■□□□□ 0.54
TRAPPC11-202ENST00000357207 CBX1P83916 185 aa18.41■□□□□ 0.54
TRAPPC11-202ENST00000357207 PTPN14Q15678 1187 aa18.41■□□□□ 0.54
TRAPPC11-202ENST00000357207 NCBP3Q53F19 620 aaKnown RBP18.41■□□□□ 0.54
TRAPPC11-202ENST00000357207 CCDC158Q5M9N0 1113 aa18.41■□□□□ 0.54
TRAPPC11-202ENST00000357207 PPFIBP1Q86W92 1011 aa18.41■□□□□ 0.54
TRAPPC11-202ENST00000357207 DDX11Q96FC9 970 aa18.41■□□□□ 0.54
TRAPPC11-202ENST00000357207 PRPF40BQ6NWY9 871 aaKnown RBP18.41■□□□□ 0.54
TRAPPC11-202ENST00000357207 SYTL4Q96C24 671 aaPredicted RBP18.41■□□□□ 0.54
TRAPPC11-202ENST00000357207 KIF2AO00139 706 aaPredicted RBP18.4■□□□□ 0.54
TRAPPC11-202ENST00000357207 MRC2Q9UBG0 1479 aa18.4■□□□□ 0.54
TRAPPC11-202ENST00000357207 NUCB1Q02818 461 aa18.4■□□□□ 0.54
TRAPPC11-202ENST00000357207 PATL2C9JE40 543 aaKnown RBP18.39■□□□□ 0.53
TRAPPC11-202ENST00000357207 DACH1Q9UI36 760 aa18.39■□□□□ 0.53
TRAPPC11-202ENST00000357207 F6X3S4 739 aa18.39■□□□□ 0.53
TRAPPC11-202ENST00000357207 UBE2Q2Q8WVN8 375 aa18.39■□□□□ 0.53
TRAPPC11-202ENST00000357207 PRDM10Q9NQV6 1147 aa18.39■□□□□ 0.53
TRAPPC11-202ENST00000357207 IL16Q14005 1332 aa18.39■□□□□ 0.53
TRAPPC11-202ENST00000357207 RRP12Q5JTH9 1297 aaKnown RBP18.39■□□□□ 0.53
TRAPPC11-202ENST00000357207 NUDT16Q96DE0 195 aaKnown RBP18.39■□□□□ 0.53
TRAPPC11-202ENST00000357207 RBM27Q9P2N5 1060 aaKnown RBP18.39■□□□□ 0.53
TRAPPC11-202ENST00000357207 PLB1Q6P1J6 1458 aa18.38■□□□□ 0.53
TRAPPC11-202ENST00000357207 AXDND1Q5T1B0 1012 aaPredicted RBP18.38■□□□□ 0.53
TRAPPC11-202ENST00000357207 CUL7Q14999 1698 aa18.38■□□□□ 0.53
TRAPPC11-202ENST00000357207 ERLIN1O75477 346 aa18.38■□□□□ 0.53
TRAPPC11-202ENST00000357207 ZSCAN23Q3MJ62 389 aa18.38■□□□□ 0.53
TRAPPC11-202ENST00000357207 TRIM22Q8IYM9 498 aa18.38■□□□□ 0.53
TRAPPC11-202ENST00000357207 SMTNL1A8MU46 457 aa18.38■□□□□ 0.53
TRAPPC11-202ENST00000357207 SNX21Q969T3 373 aa18.38■□□□□ 0.53
TRAPPC11-202ENST00000357207 RALGAPBQ86X10 1494 aa18.38■□□□□ 0.53
TRAPPC11-202ENST00000357207 RAD21O60216 631 aa18.37■□□□□ 0.53
TRAPPC11-202ENST00000357207 DYNC1I1O14576 645 aa18.37■□□□□ 0.53
TRAPPC11-202ENST00000357207 SFPQP23246 707 aaKnown RBP eCLIP18.37■□□□□ 0.53
TRAPPC11-202ENST00000357207 TTC22Q5TAA0 569 aa18.37■□□□□ 0.53
TRAPPC11-202ENST00000357207 KIF18AQ8NI77 898 aa18.37■□□□□ 0.53
TRAPPC11-202ENST00000357207 FYB1O15117 783 aa18.37■□□□□ 0.53
TRAPPC11-202ENST00000357207 TXLNAP40222 546 aa18.37■□□□□ 0.53
TRAPPC11-202ENST00000357207 ADCY5O95622 1261 aa18.37■□□□□ 0.53
TRAPPC11-202ENST00000357207 DDX54Q8TDD1 881 aaKnown RBP18.37■□□□□ 0.53
TRAPPC11-202ENST00000357207 EMILIN1Q9Y6C2 1016 aa18.37■□□□□ 0.53
TRAPPC11-202ENST00000357207 TTC39AQ5SRH9 613 aa18.36■□□□□ 0.53
TRAPPC11-202ENST00000357207 CTNNA3Q9UI47 895 aa18.36■□□□□ 0.53
TRAPPC11-202ENST00000357207 GNAT3A8MTJ3 354 aa18.36■□□□□ 0.53
TRAPPC11-202ENST00000357207 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.36■□□□□ 0.533e-8■■■■■ 43.3
TRAPPC11-202ENST00000357207 EIF3JO75822 258 aaKnown RBP18.35■□□□□ 0.53
TRAPPC11-202ENST00000357207 ANO10Q9NW15 660 aa18.35■□□□□ 0.53
TRAPPC11-202ENST00000357207 ZNHIT6Q9NWK9 470 aaKnown RBP18.35■□□□□ 0.53
TRAPPC11-202ENST00000357207 UVSSAQ2YD98 709 aa18.35■□□□□ 0.53
TRAPPC11-202ENST00000357207 LRSAM1Q6UWE0 723 aa18.35■□□□□ 0.53
TRAPPC11-202ENST00000357207 MAGEC2Q9UBF1 373 aaPredicted RBP18.35■□□□□ 0.53
TRAPPC11-202ENST00000357207 CFAP100Q494V2 611 aa18.35■□□□□ 0.53
TRAPPC11-202ENST00000357207 CKAP2LQ8IYA6 745 aa18.35■□□□□ 0.53
TRAPPC11-202ENST00000357207 ARHGAP45Q92619 1136 aa18.35■□□□□ 0.53
TRAPPC11-202ENST00000357207 TNNT1P13805 278 aa18.35■□□□□ 0.53
TRAPPC11-202ENST00000357207 NSD2O96028 1365 aa18.34■□□□□ 0.53
TRAPPC11-202ENST00000357207 STX6O43752 255 aa18.34■□□□□ 0.53
TRAPPC11-202ENST00000357207 SEC24BO95487 1268 aa18.34■□□□□ 0.53
TRAPPC11-202ENST00000357207 MYL6BP14649 208 aa18.34■□□□□ 0.53
TRAPPC11-202ENST00000357207 PTPRCP08575 1304 aa18.34■□□□□ 0.53
TRAPPC11-202ENST00000357207 TMCO3Q6UWJ1 677 aa18.34■□□□□ 0.53
TRAPPC11-202ENST00000357207 NME9Q86XW9 330 aa18.33■□□□□ 0.53
TRAPPC11-202ENST00000357207 CLIP2Q9UDT6 1046 aa18.33■□□□□ 0.53
TRAPPC11-202ENST00000357207 LRRFIP2Q9Y608 721 aaKnown RBP18.33■□□□□ 0.53
TRAPPC11-202ENST00000357207 CDKL5O76039 1030 aa18.33■□□□□ 0.53
TRAPPC11-202ENST00000357207 RAPGEF3O95398 923 aa18.33■□□□□ 0.53
TRAPPC11-202ENST00000357207 ESCO1Q5FWF5 840 aa18.33■□□□□ 0.53
TRAPPC11-202ENST00000357207 C16orf45Q96MC5 204 aaPredicted RBP18.33■□□□□ 0.53
TRAPPC11-202ENST00000357207 ERICH4A6NGS2 130 aa18.33■□□□□ 0.52
TRAPPC11-202ENST00000357207 BTBD11A6QL63 1104 aa18.33■□□□□ 0.52
TRAPPC11-202ENST00000357207 FKBP4Q02790 459 aaKnown RBP eCLIP18.33■□□□□ 0.52
TRAPPC11-202ENST00000357207 WAPLQ7Z5K2 1190 aa18.33■□□□□ 0.52
TRAPPC11-202ENST00000357207 TMX3Q96JJ7 454 aa18.33■□□□□ 0.52
TRAPPC11-202ENST00000357207 PRIMPOLQ96LW4 560 aa18.33■□□□□ 0.52
TRAPPC11-202ENST00000357207 DDX19AQ9NUU7 478 aaKnown RBP18.33■□□□□ 0.52
TRAPPC11-202ENST00000357207 CEP126Q9P2H0 1117 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms