RNA–Protein interactions for RNA: ENST00000356708.11

ATP5C1-202, Transcript of ATP synthase subunit gamma, mitochondrial, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP5C1, Length 1,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP5C1-202ENST00000356708 TRIM26Q12899 539 aaPredicted RBP30.35■■■□□ 2.45
ATP5C1-202ENST00000356708 NBPF6Q5VWK0 638 aa30.34■■■□□ 2.45
ATP5C1-202ENST00000356708 NBPF4Q96M43 638 aa30.34■■■□□ 2.45
ATP5C1-202ENST00000356708 CDCA8Q53HL2 280 aa30.32■■■□□ 2.44
ATP5C1-202ENST00000356708 MEGF6O75095 1541 aa30.32■■■□□ 2.44
ATP5C1-202ENST00000356708 KCNQ4P56696 695 aa30.3■■■□□ 2.44
ATP5C1-202ENST00000356708 SLC16A10Q8TF71 515 aa30.3■■■□□ 2.44
ATP5C1-202ENST00000356708 CGNL1Q0VF96 1302 aa30.29■■■□□ 2.44
ATP5C1-202ENST00000356708 USHBP1Q8N6Y0 703 aa30.29■■■□□ 2.44
ATP5C1-202ENST00000356708 RAPGEF4Q8WZA2 1011 aa30.28■■■□□ 2.44
ATP5C1-202ENST00000356708 TFCP2L1Q9NZI6 479 aa30.28■■■□□ 2.44
ATP5C1-202ENST00000356708 SMG6Q86US8 1419 aaKnown RBP30.28■■■□□ 2.44
ATP5C1-202ENST00000356708 NSD2O96028 1365 aa30.28■■■□□ 2.44
ATP5C1-202ENST00000356708 DOT1LQ8TEK3 1739 aa30.27■■■□□ 2.44
ATP5C1-202ENST00000356708 SHANK3Q9BYB0 1731 aa30.27■■■□□ 2.44
ATP5C1-202ENST00000356708 PNPLA7Q6ZV29 1317 aa30.26■■■□□ 2.44
ATP5C1-202ENST00000356708 HSP90AB2PQ58FF8 381 aa30.26■■■□□ 2.43
ATP5C1-202ENST00000356708 TATP17735 454 aaPredicted RBP30.25■■■□□ 2.43
ATP5C1-202ENST00000356708 MAP3K5Q99683 1374 aa30.25■■■□□ 2.43
ATP5C1-202ENST00000356708 INSRP06213 1382 aa30.24■■■□□ 2.43
ATP5C1-202ENST00000356708 QSER1Q2KHR3 1735 aa30.24■■■□□ 2.43
ATP5C1-202ENST00000356708 POLD1P28340 1107 aa30.23■■■□□ 2.43
ATP5C1-202ENST00000356708 CCNL1Q9UK58 526 aaPredicted RBP30.23■■■□□ 2.43
ATP5C1-202ENST00000356708 UTRNP46939 3433 aa30.23■■■□□ 2.43
ATP5C1-202ENST00000356708 LY75O60449 1722 aa30.22■■■□□ 2.43
ATP5C1-202ENST00000356708 FLT4P35916 1363 aa30.21■■■□□ 2.43
ATP5C1-202ENST00000356708 CARD14Q9BXL6 1004 aa30.21■■■□□ 2.43
ATP5C1-202ENST00000356708 KIF20BQ96Q89 1820 aa30.2■■■□□ 2.43
ATP5C1-202ENST00000356708 KIF24Q5T7B8 1368 aa30.2■■■□□ 2.43
ATP5C1-202ENST00000356708 KLHL34Q8N239 644 aa30.18■■■□□ 2.42
ATP5C1-202ENST00000356708 CHD4Q14839 1912 aa30.18■■■□□ 2.42
ATP5C1-202ENST00000356708 ZNF784Q8NCA9 323 aaPredicted RBP30.17■■■□□ 2.42
ATP5C1-202ENST00000356708 PCDH11XQ9BZA7 1347 aa30.17■■■□□ 2.42
ATP5C1-202ENST00000356708 PCDH11YQ9BZA8 1340 aa30.17■■■□□ 2.42
ATP5C1-202ENST00000356708 TUBGCP6Q96RT7 1819 aa30.17■■■□□ 2.42
ATP5C1-202ENST00000356708 GPR162Q16538 588 aa30.15■■■□□ 2.42
ATP5C1-202ENST00000356708 TIMELESSQ9UNS1 1208 aa30.15■■■□□ 2.42
ATP5C1-202ENST00000356708 EMILIN1Q9Y6C2 1016 aa30.15■■■□□ 2.42
ATP5C1-202ENST00000356708 NSD3Q9BZ95 1437 aa30.14■■■□□ 2.42
ATP5C1-202ENST00000356708 COL24A1Q17RW2 1714 aa30.14■■■□□ 2.42
ATP5C1-202ENST00000356708 MSH5O43196 834 aa30.13■■■□□ 2.41
ATP5C1-202ENST00000356708 PPM1GO15355 546 aaPredicted RBP30.11■■■□□ 2.41
ATP5C1-202ENST00000356708 CYP27B1O15528 508 aa30.11■■■□□ 2.41
ATP5C1-202ENST00000356708 MPRIPQ6WCQ1 1025 aa30.11■■■□□ 2.41
ATP5C1-202ENST00000356708 COL23A1Q86Y22 540 aaPredicted RBP30.11■■■□□ 2.41
ATP5C1-202ENST00000356708 HMGB2P26583 209 aaKnown RBP30.1■■■□□ 2.41
ATP5C1-202ENST00000356708 PALLDQ8WX93 1383 aa30.06■■■□□ 2.4
ATP5C1-202ENST00000356708 PELP1Q8IZL8 1130 aaKnown RBP30.05■■■□□ 2.4
ATP5C1-202ENST00000356708 NLGN2Q8NFZ4 835 aa30.05■■■□□ 2.4
ATP5C1-202ENST00000356708 WASHC2AQ641Q2 1341 aa30.04■■■□□ 2.4
ATP5C1-202ENST00000356708 SMARCC1Q92922 1105 aaPredicted RBP30.04■■■□□ 2.4
ATP5C1-202ENST00000356708 SPG7Q9UQ90 795 aa30.03■■■□□ 2.4
ATP5C1-202ENST00000356708 MAP2P11137 1827 aaKnown RBP30.03■■■□□ 2.4
ATP5C1-202ENST00000356708 NKX1-1Q15270 411 aaPredicted RBP30.02■■■□□ 2.4
ATP5C1-202ENST00000356708 FLAD1Q8NFF5 587 aa30.02■■■□□ 2.4
ATP5C1-202ENST00000356708 NCAPD2Q15021 1401 aa30.02■■■□□ 2.4
ATP5C1-202ENST00000356708 C5P01031 1676 aa30.01■■■□□ 2.4
ATP5C1-202ENST00000356708 ITGB4P16144 1822 aa30.01■■■□□ 2.4
ATP5C1-202ENST00000356708 MSL1Q68DK7 614 aa30.01■■■□□ 2.39
ATP5C1-202ENST00000356708 EYA1Q99502 592 aa30.01■■■□□ 2.39
ATP5C1-202ENST00000356708 CLSPNQ9HAW4 1339 aa30■■■□□ 2.39
ATP5C1-202ENST00000356708 PKD1L3Q7Z443 1732 aa30■■■□□ 2.39
ATP5C1-202ENST00000356708 PIGBQ92521 554 aa30■■■□□ 2.39
ATP5C1-202ENST00000356708 POLR3GLQ9BT43 218 aa30■■■□□ 2.39
ATP5C1-202ENST00000356708 TAF1LQ8IZX4 1826 aa29.99■■■□□ 2.39
ATP5C1-202ENST00000356708 PCGF6Q9BYE7 350 aa29.99■■■□□ 2.39
ATP5C1-202ENST00000356708 POLKQ9UBT6 870 aa29.99■■■□□ 2.39
ATP5C1-202ENST00000356708 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.98■■■□□ 2.392e-8■□□□□ 11.2
ATP5C1-202ENST00000356708 TOGARAM1Q9Y4F4 1720 aa29.98■■■□□ 2.39
ATP5C1-202ENST00000356708 GOLGB1Q14789 3259 aaKnown RBP29.98■■■□□ 2.39
ATP5C1-202ENST00000356708 ANKRD26Q9UPS8 1709 aa29.96■■■□□ 2.39
ATP5C1-202ENST00000356708 AK7Q96M32 723 aa29.96■■■□□ 2.39
ATP5C1-202ENST00000356708 GRIN3BO60391 1043 aa29.93■■■□□ 2.38
ATP5C1-202ENST00000356708 TNNT2P45379 298 aaPredicted RBP29.93■■■□□ 2.38
ATP5C1-202ENST00000356708 C4BP0C0L5 1744 aa29.92■■■□□ 2.38
ATP5C1-202ENST00000356708 IFNL2Q8IZJ0 200 aa29.92■■■□□ 2.38
ATP5C1-202ENST00000356708 TMOD3Q9NYL9 352 aa29.92■■■□□ 2.38
ATP5C1-202ENST00000356708 LOC102724428A0A0B4J2F2 783 aa29.91■■■□□ 2.38
ATP5C1-202ENST00000356708 YBX3P16989 372 aaKnown RBP eCLIP29.91■■■□□ 2.381e-7■□□□□ 10.5
ATP5C1-202ENST00000356708 SIK1P57059 783 aa29.91■■■□□ 2.38
ATP5C1-202ENST00000356708 CD2APQ9Y5K6 639 aa29.91■■■□□ 2.38
ATP5C1-202ENST00000356708 PHKG2P15735 406 aa29.9■■■□□ 2.38
ATP5C1-202ENST00000356708 EIF4A2Q14240 407 aaKnown RBP29.9■■■□□ 2.38
ATP5C1-202ENST00000356708 AMIGO3Q86WK7 504 aa29.9■■■□□ 2.38
ATP5C1-202ENST00000356708 C1QTNF8P60827 252 aa29.89■■■□□ 2.38
ATP5C1-202ENST00000356708 PHF14O94880 888 aa29.88■■■□□ 2.37
ATP5C1-202ENST00000356708 ASAP1Q9ULH1 1129 aa29.88■■■□□ 2.37
ATP5C1-202ENST00000356708 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.87■■■□□ 2.37
ATP5C1-202ENST00000356708 EIF4G2P78344 907 aaKnown RBP eCLIP29.87■■■□□ 2.37
ATP5C1-202ENST00000356708 SMIM5Q71RC9 77 aa29.87■■■□□ 2.37
ATP5C1-202ENST00000356708 LINC00116Q8NCU8 138 aa29.86■■■□□ 2.37
ATP5C1-202ENST00000356708 UBR3Q6ZT12 1888 aa29.85■■■□□ 2.37
ATP5C1-202ENST00000356708 SSFA2P28290 1259 aa29.85■■■□□ 2.37
ATP5C1-202ENST00000356708 PANK3Q9H999 370 aa29.85■■■□□ 2.37
ATP5C1-202ENST00000356708 HSPA5P11021 654 aaKnown RBP29.84■■■□□ 2.37
ATP5C1-202ENST00000356708 ATP6V1AP38606 617 aa29.83■■■□□ 2.37
ATP5C1-202ENST00000356708 ATG3Q9NT62 314 aa29.83■■■□□ 2.37
ATP5C1-202ENST00000356708 ITPK1Q13572 414 aa29.82■■■□□ 2.36
ATP5C1-202ENST00000356708 IGSF1Q8N6C5 1336 aa29.81■■■□□ 2.36
ATP5C1-202ENST00000356708 PLEKHG2Q9H7P9 1386 aa29.8■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms