RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 EP400Q96L91 3159 aa23.93■■□□□ 1.42
PDLIM7-202ENST00000355841 PDE3BQ13370 1112 aa23.92■■□□□ 1.42
PDLIM7-202ENST00000355841 LRRC37A3O60309 1634 aa23.92■■□□□ 1.42
PDLIM7-202ENST00000355841 OVOS2A0A0G2JMS6 1433 aa23.92■■□□□ 1.42
PDLIM7-202ENST00000355841 KDRP35968 1356 aa23.91■■□□□ 1.42
PDLIM7-202ENST00000355841 PARP4Q9UKK3 1724 aaKnown RBP23.91■■□□□ 1.42
PDLIM7-202ENST00000355841 ZCRB1Q8TBF4 217 aaKnown RBP23.9■■□□□ 1.42
PDLIM7-202ENST00000355841 DDX54Q8TDD1 881 aaKnown RBP23.9■■□□□ 1.42
PDLIM7-202ENST00000355841 MARCH10Q8NA82 808 aaPredicted RBP23.89■■□□□ 1.41
PDLIM7-202ENST00000355841 TNS2Q63HR2 1409 aa23.89■■□□□ 1.41
PDLIM7-202ENST00000355841 MRS2Q9HD23 443 aa23.88■■□□□ 1.41
PDLIM7-202ENST00000355841 RSPH6AQ9H0K4 717 aa23.86■■□□□ 1.41
PDLIM7-202ENST00000355841 PRKAR2BP31323 418 aa23.86■■□□□ 1.41
PDLIM7-202ENST00000355841 MIER1Q8N108 512 aa23.85■■□□□ 1.41
PDLIM7-202ENST00000355841 WDR43Q15061 677 aaKnown RBP eCLIP23.83■■□□□ 1.41
PDLIM7-202ENST00000355841 SPG7Q9UQ90 795 aa23.83■■□□□ 1.41
PDLIM7-202ENST00000355841 CYP27B1O15528 508 aa23.83■■□□□ 1.4
PDLIM7-202ENST00000355841 FCHSD2O94868 740 aa23.83■■□□□ 1.4
PDLIM7-202ENST00000355841 PHACTR3Q96KR7 559 aa23.83■■□□□ 1.4
PDLIM7-202ENST00000355841 PLEKHO1Q53GL0 409 aaPredicted RBP23.82■■□□□ 1.4
PDLIM7-202ENST00000355841 ADAMTS8Q9UP79 889 aa23.82■■□□□ 1.4
PDLIM7-202ENST00000355841 PCDH11XQ9BZA7 1347 aa23.81■■□□□ 1.4
PDLIM7-202ENST00000355841 PCDH11YQ9BZA8 1340 aa23.81■■□□□ 1.4
PDLIM7-202ENST00000355841 SHANK3Q9BYB0 1731 aa23.81■■□□□ 1.4
PDLIM7-202ENST00000355841 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.8■■□□□ 1.4
PDLIM7-202ENST00000355841 MTHFSDQ2M296 383 aaKnown RBP23.79■■□□□ 1.4
PDLIM7-202ENST00000355841 AMOTQ4VCS5 1084 aa23.79■■□□□ 1.4
PDLIM7-202ENST00000355841 ZNF530Q6P9A1 599 aaPredicted RBP23.79■■□□□ 1.4
PDLIM7-202ENST00000355841 PKD1L3Q7Z443 1732 aa23.79■■□□□ 1.4
PDLIM7-202ENST00000355841 CCDC146Q8IYE0 955 aa23.78■■□□□ 1.4
PDLIM7-202ENST00000355841 PHKG2P15735 406 aa23.77■■□□□ 1.4
PDLIM7-202ENST00000355841 FAM196AQ6ZSG2 479 aa23.77■■□□□ 1.4
PDLIM7-202ENST00000355841 PNISRQ8TF01 805 aaKnown RBP23.77■■□□□ 1.4
PDLIM7-202ENST00000355841 PLEKHF1Q96S99 279 aa23.77■■□□□ 1.4
PDLIM7-202ENST00000355841 ACSBG1Q96GR2 724 aa23.76■■□□□ 1.39
PDLIM7-202ENST00000355841 IFNL2Q8IZJ0 200 aa23.76■■□□□ 1.39
PDLIM7-202ENST00000355841 TRIM37O94972 964 aa23.74■■□□□ 1.39
PDLIM7-202ENST00000355841 PTF1AQ7RTS3 328 aa23.74■■□□□ 1.39
PDLIM7-202ENST00000355841 PLEKHG2Q9H7P9 1386 aa23.74■■□□□ 1.39
PDLIM7-202ENST00000355841 C1orf141Q5JVX7 400 aa23.73■■□□□ 1.39
PDLIM7-202ENST00000355841 KCNQ2O43526 872 aa23.73■■□□□ 1.39
PDLIM7-202ENST00000355841 FAM9BQ8IZU0 186 aa23.73■■□□□ 1.39
PDLIM7-202ENST00000355841 MPRIPQ6WCQ1 1025 aa23.71■■□□□ 1.39
PDLIM7-202ENST00000355841 MAPK8IP3Q9UPT6 1336 aa23.71■■□□□ 1.39
PDLIM7-202ENST00000355841 CCER2I3L3R5 266 aa23.7■■□□□ 1.39
PDLIM7-202ENST00000355841 NEFMP07197 916 aa23.7■■□□□ 1.39
PDLIM7-202ENST00000355841 NKX1-1Q15270 411 aaPredicted RBP23.7■■□□□ 1.39
PDLIM7-202ENST00000355841 GAS2L2Q8NHY3 880 aa23.7■■□□□ 1.39
PDLIM7-202ENST00000355841 SYTL4Q96C24 671 aaPredicted RBP23.7■■□□□ 1.39
PDLIM7-202ENST00000355841 PNNQ9H307 717 aaKnown RBP23.7■■□□□ 1.39
PDLIM7-202ENST00000355841 SENP3-EIF4A1A0A087X0R7 540 aa23.7■■□□□ 1.38
PDLIM7-202ENST00000355841 PRIM1P49642 420 aaKnown RBP23.7■■□□□ 1.38
PDLIM7-202ENST00000355841 AKAP4Q5JQC9 854 aa23.7■■□□□ 1.38
PDLIM7-202ENST00000355841 UPF1Q92900 1129 aaKnown RBP eCLIP23.69■■□□□ 1.38
PDLIM7-202ENST00000355841 BCL9O00512 1426 aa23.69■■□□□ 1.38
PDLIM7-202ENST00000355841 RUNDC1Q96C34 613 aa23.68■■□□□ 1.38
PDLIM7-202ENST00000355841 KDM6AO15550 1401 aaPredicted RBP23.67■■□□□ 1.38
PDLIM7-202ENST00000355841 LGR6Q9HBX8 967 aa23.67■■□□□ 1.38
PDLIM7-202ENST00000355841 RRP7AQ9Y3A4 280 aaKnown RBP23.67■■□□□ 1.38
PDLIM7-202ENST00000355841 DCAF5Q96JK2 942 aa23.66■■□□□ 1.38
PDLIM7-202ENST00000355841 KAT6BQ8WYB5 2073 aa23.66■■□□□ 1.38
PDLIM7-202ENST00000355841 DOT1LQ8TEK3 1739 aa23.65■■□□□ 1.38
PDLIM7-202ENST00000355841 MAP3K5Q99683 1374 aa23.65■■□□□ 1.38
PDLIM7-202ENST00000355841 GNAT3A8MTJ3 354 aa23.65■■□□□ 1.38
PDLIM7-202ENST00000355841 HSP90AB1P08238 724 aaKnown RBP23.65■■□□□ 1.38
PDLIM7-202ENST00000355841 NEUROD2Q15784 382 aa23.65■■□□□ 1.38
PDLIM7-202ENST00000355841 NFE2L2Q16236 605 aa23.65■■□□□ 1.38
PDLIM7-202ENST00000355841 SBF2Q86WG5 1849 aa23.64■■□□□ 1.38
PDLIM7-202ENST00000355841 BCL11BQ9C0K0 894 aaPredicted RBP23.64■■□□□ 1.38
PDLIM7-202ENST00000355841 TOGARAM1Q9Y4F4 1720 aa23.64■■□□□ 1.38
PDLIM7-202ENST00000355841 APAF1O14727 1248 aa23.63■■□□□ 1.37
PDLIM7-202ENST00000355841 DCTN1Q14203 1278 aa23.63■■□□□ 1.37
PDLIM7-202ENST00000355841 RNMTO43148 476 aaKnown RBP23.62■■□□□ 1.37
PDLIM7-202ENST00000355841 TMPOP42166 694 aaKnown RBP23.62■■□□□ 1.37
PDLIM7-202ENST00000355841 MCM10Q7L590 875 aa23.62■■□□□ 1.37
PDLIM7-202ENST00000355841 IL17REQ8NFR9 667 aa23.62■■□□□ 1.37
PDLIM7-202ENST00000355841 APBA3O96018 575 aa23.61■■□□□ 1.37
PDLIM7-202ENST00000355841 RIPK4P57078 832 aa23.6■■□□□ 1.37
PDLIM7-202ENST00000355841 SF3B2Q13435 895 aaKnown RBP23.6■■□□□ 1.37
PDLIM7-202ENST00000355841 PIGBQ92521 554 aa23.6■■□□□ 1.37
PDLIM7-202ENST00000355841 NHSQ6T4R5 1651 aa23.6■■□□□ 1.37
PDLIM7-202ENST00000355841 SOCS7O14512 581 aa23.6■■□□□ 1.37
PDLIM7-202ENST00000355841 DEFB132Q7Z7B7 95 aa23.6■■□□□ 1.37
PDLIM7-202ENST00000355841 RTF1Q92541 710 aaKnown RBP23.6■■□□□ 1.37
PDLIM7-202ENST00000355841 TMOD3Q9NYL9 352 aa23.6■■□□□ 1.37
PDLIM7-202ENST00000355841 CABP4P57796 275 aa23.59■■□□□ 1.37
PDLIM7-202ENST00000355841 NFATC2IPQ8NCF5 419 aa23.59■■□□□ 1.37
PDLIM7-202ENST00000355841 THUMPD2Q9BTF0 503 aaKnown RBP23.59■■□□□ 1.37
PDLIM7-202ENST00000355841 ERVV-2B6SEH9 535 aa23.58■■□□□ 1.37
PDLIM7-202ENST00000355841 CCDC125Q86Z20 511 aa23.57■■□□□ 1.36
PDLIM7-202ENST00000355841 TNS1Q9HBL0 1735 aaKnown RBP23.57■■□□□ 1.36
PDLIM7-202ENST00000355841 EN1Q05925 392 aaPredicted RBP23.56■■□□□ 1.36
PDLIM7-202ENST00000355841 SLC52A2Q9HAB3 445 aa23.56■■□□□ 1.36
PDLIM7-202ENST00000355841 SCN11AQ9UI33 1791 aa23.56■■□□□ 1.36
PDLIM7-202ENST00000355841 DLG5Q8TDM6 1919 aa23.55■■□□□ 1.36
PDLIM7-202ENST00000355841 ITGB4P16144 1822 aa23.55■■□□□ 1.36
PDLIM7-202ENST00000355841 CEMIPQ8WUJ3 1361 aa23.55■■□□□ 1.36
PDLIM7-202ENST00000355841 ASAP1Q9ULH1 1129 aa23.54■■□□□ 1.36
PDLIM7-202ENST00000355841 TRIM35Q9UPQ4 493 aa23.54■■□□□ 1.36
PDLIM7-202ENST00000355841 SALL2Q9Y467 1007 aaPredicted RBP23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms