RNA–Protein interactions for RNA: ENST00000355485.6

VANGL1-202, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 8,691 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-202ENST00000355485 MCM2P49736 904 aa9.23□□□□□ -0.93
VANGL1-202ENST00000355485 AIMP1Q12904 312 aaKnown RBP9.23□□□□□ -0.93
VANGL1-202ENST00000355485 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.23□□□□□ -0.93
VANGL1-202ENST00000355485 NINLQ9Y2I6 1382 aa9.23□□□□□ -0.93
VANGL1-202ENST00000355485 ANKRD62A6NC57 917 aa9.23□□□□□ -0.93
VANGL1-202ENST00000355485 KIF3BO15066 747 aa9.23□□□□□ -0.93
VANGL1-202ENST00000355485 GIMAP6Q6P9H5 292 aa9.23□□□□□ -0.93
VANGL1-202ENST00000355485 MTHFSP49914 203 aa9.23□□□□□ -0.93
VANGL1-202ENST00000355485 BMS1Q14692 1282 aaKnown RBP9.23□□□□□ -0.93
VANGL1-202ENST00000355485 SEPT7Q16181 437 aaKnown RBP9.23□□□□□ -0.93
VANGL1-202ENST00000355485 ISM2Q6H9L7 571 aa9.23□□□□□ -0.93
VANGL1-202ENST00000355485 TSC1Q92574 1164 aa9.23□□□□□ -0.93
VANGL1-202ENST00000355485 CYP46A1Q9Y6A2 500 aa9.23□□□□□ -0.93
VANGL1-202ENST00000355485 SMARCA4P51532 1647 aa9.23□□□□□ -0.93
VANGL1-202ENST00000355485 PRIMPOLQ96LW4 560 aa9.23□□□□□ -0.93
VANGL1-202ENST00000355485 ROCK1Q13464 1354 aa9.23□□□□□ -0.93
VANGL1-202ENST00000355485 SLC3A2P08195 630 aaKnown RBP9.22□□□□□ -0.93
VANGL1-202ENST00000355485 CWC27Q6UX04 472 aaKnown RBP9.22□□□□□ -0.93
VANGL1-202ENST00000355485 C17orf53Q8N3J3 647 aaPredicted RBP9.22□□□□□ -0.93
VANGL1-202ENST00000355485 TMEM57Q8N5G2 664 aa9.22□□□□□ -0.93
VANGL1-202ENST00000355485 MAGEC2Q9UBF1 373 aaPredicted RBP9.22□□□□□ -0.93
VANGL1-202ENST00000355485 CCDC144AA2RUR9 1427 aa9.22□□□□□ -0.93
VANGL1-202ENST00000355485 PRIM1P49642 420 aaKnown RBP9.22□□□□□ -0.93
VANGL1-202ENST00000355485 GUCY1B3Q02153 619 aa9.22□□□□□ -0.93
VANGL1-202ENST00000355485 CFAP100Q494V2 611 aa9.22□□□□□ -0.93
VANGL1-202ENST00000355485 LRSAM1Q6UWE0 723 aa9.22□□□□□ -0.93
VANGL1-202ENST00000355485 KRBA2Q6ZNG9 492 aa9.22□□□□□ -0.93
VANGL1-202ENST00000355485 NEFHP12036 1026 aa9.22□□□□□ -0.93
VANGL1-202ENST00000355485 SAFBQ15424 915 aaKnown RBP eCLIP9.22□□□□□ -0.93
VANGL1-202ENST00000355485 TMC6Q7Z403 805 aa9.22□□□□□ -0.93
VANGL1-202ENST00000355485 CBFA2T2O43439 604 aa9.22□□□□□ -0.93
VANGL1-202ENST00000355485 UBTFL1P0CB47 393 aaPredicted RBP9.22□□□□□ -0.93
VANGL1-202ENST00000355485 SLFN5Q08AF3 891 aa9.22□□□□□ -0.93
VANGL1-202ENST00000355485 TTC31Q49AM3 519 aaPredicted RBP9.22□□□□□ -0.93
VANGL1-202ENST00000355485 ZNHIT6Q9NWK9 470 aaKnown RBP9.22□□□□□ -0.93
VANGL1-202ENST00000355485 DNA2P51530 1060 aa9.21□□□□□ -0.93
VANGL1-202ENST00000355485 C8orf34Q49A92 452 aa9.21□□□□□ -0.93
VANGL1-202ENST00000355485 JAKMIP3Q5VZ66 844 aa9.21□□□□□ -0.93
VANGL1-202ENST00000355485 NUTM1Q86Y26 1132 aa9.21□□□□□ -0.93
VANGL1-202ENST00000355485 TXLNBQ8N3L3 684 aa9.21□□□□□ -0.93
VANGL1-202ENST00000355485 XBP1P17861 261 aa9.21□□□□□ -0.93
VANGL1-202ENST00000355485 GTF3C6Q969F1 213 aa9.21□□□□□ -0.93
VANGL1-202ENST00000355485 HCLS1P14317 486 aaPredicted RBP9.21□□□□□ -0.93
VANGL1-202ENST00000355485 GNAI1P63096 354 aa9.21□□□□□ -0.93
VANGL1-202ENST00000355485 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.21□□□□□ -0.94
VANGL1-202ENST00000355485 KIF4BQ2VIQ3 1234 aa9.21□□□□□ -0.94
VANGL1-202ENST00000355485 CRACR2AQ9BSW2 395 aa9.21□□□□□ -0.94
VANGL1-202ENST00000355485 IL1RAPL2Q9NP60 686 aa9.21□□□□□ -0.94
VANGL1-202ENST00000355485 CABP2Q9NPB3 220 aa9.21□□□□□ -0.94
VANGL1-202ENST00000355485 SNW1Q13573 536 aaKnown RBP9.21□□□□□ -0.94
VANGL1-202ENST00000355485 FAM107BQ9H098 131 aa9.2□□□□□ -0.94
VANGL1-202ENST00000355485 CFAP45Q9UL16 551 aa9.2□□□□□ -0.94
VANGL1-202ENST00000355485 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.2□□□□□ -0.94
VANGL1-202ENST00000355485 SEC24BO95487 1268 aa9.2□□□□□ -0.94
VANGL1-202ENST00000355485 COG3Q96JB2 828 aa9.2□□□□□ -0.94
VANGL1-202ENST00000355485 CCDC113Q9H0I3 377 aa9.2□□□□□ -0.94
VANGL1-202ENST00000355485 RNF216Q9NWF9 866 aaPredicted RBP9.2□□□□□ -0.94
VANGL1-202ENST00000355485 TFIP11Q9UBB9 837 aaKnown RBP9.2□□□□□ -0.94
VANGL1-202ENST00000355485 ZKSCAN5Q9Y2L8 839 aa9.2□□□□□ -0.94
VANGL1-202ENST00000355485 RBM42Q9BTD8 480 aaKnown RBP9.2□□□□□ -0.94
VANGL1-202ENST00000355485 KIAA1328Q86T90 577 aa9.2□□□□□ -0.94
VANGL1-202ENST00000355485 TWISTNBQ3B726 338 aaPredicted RBP9.2□□□□□ -0.94
VANGL1-202ENST00000355485 CEP57L1Q8IYX8 460 aa9.2□□□□□ -0.94
VANGL1-202ENST00000355485 SIL1Q9H173 461 aa9.2□□□□□ -0.94
VANGL1-202ENST00000355485 CASTP20810 708 aaKnown RBP9.19□□□□□ -0.94
VANGL1-202ENST00000355485 NF2P35240 595 aa9.19□□□□□ -0.94
VANGL1-202ENST00000355485 CCDC186Q7Z3E2 898 aa9.19□□□□□ -0.94
VANGL1-202ENST00000355485 CCDC148Q8NFR7 591 aa9.19□□□□□ -0.94
VANGL1-202ENST00000355485 ZNF644Q9H582 1327 aaPredicted RBP9.19□□□□□ -0.94
VANGL1-202ENST00000355485 WIZO95785 1651 aa9.19□□□□□ -0.94
VANGL1-202ENST00000355485 TBC1D32Q96NH3 1257 aa9.19□□□□□ -0.94
VANGL1-202ENST00000355485 GOLGA6L10A0A0M3HER8 536 aa9.19□□□□□ -0.94
VANGL1-202ENST00000355485 GOLGA6L7A0A1B0GV03 622 aa9.19□□□□□ -0.94
VANGL1-202ENST00000355485 ERLIN2O94905 339 aa9.19□□□□□ -0.94
VANGL1-202ENST00000355485 GBP2P32456 591 aaPredicted RBP9.19□□□□□ -0.94
VANGL1-202ENST00000355485 RALYLQ86SE5 291 aaKnown RBP9.19□□□□□ -0.94
VANGL1-202ENST00000355485 EPB41L2O43491 1005 aaKnown RBP9.19□□□□□ -0.94
VANGL1-202ENST00000355485 PPFIA3O75145 1194 aa9.19□□□□□ -0.94
VANGL1-202ENST00000355485 SMARCC1Q92922 1105 aaPredicted RBP9.19□□□□□ -0.94
VANGL1-202ENST00000355485 TANGO6Q9C0B7 1094 aa9.19□□□□□ -0.94
VANGL1-202ENST00000355485 BIN1O00499 593 aa9.19□□□□□ -0.94
VANGL1-202ENST00000355485 MCM5P33992 734 aa9.18□□□□□ -0.94
VANGL1-202ENST00000355485 CTR9Q6PD62 1173 aa9.18□□□□□ -0.94
VANGL1-202ENST00000355485 MAP2K1Q02750 393 aaPredicted RBP9.18□□□□□ -0.94
VANGL1-202ENST00000355485 PPM1EQ8WY54 764 aa9.18□□□□□ -0.94
VANGL1-202ENST00000355485 OGFRQ9NZT2 677 aa9.18□□□□□ -0.94
VANGL1-202ENST00000355485 VPS18Q9P253 973 aa9.18□□□□□ -0.94
VANGL1-202ENST00000355485 STAMBPO95630 424 aa9.18□□□□□ -0.94
VANGL1-202ENST00000355485 ATF7IPQ6VMQ6 1270 aa9.18□□□□□ -0.94
VANGL1-202ENST00000355485 DDX23Q9BUQ8 820 aaKnown RBP9.18□□□□□ -0.94
VANGL1-202ENST00000355485 NOC2LQ9Y3T9 749 aaKnown RBP9.18□□□□□ -0.94
VANGL1-202ENST00000355485 HMGB1P09429 215 aaKnown RBP9.18□□□□□ -0.94
VANGL1-202ENST00000355485 SART3Q15020 963 aaKnown RBP9.18□□□□□ -0.94
VANGL1-202ENST00000355485 RBSNQ9H1K0 784 aa9.18□□□□□ -0.94
VANGL1-202ENST00000355485 TDO2P48775 406 aa9.18□□□□□ -0.94
VANGL1-202ENST00000355485 KLHL40Q2TBA0 621 aa9.18□□□□□ -0.94
VANGL1-202ENST00000355485 ARHGAP29Q52LW3 1261 aa9.18□□□□□ -0.94
VANGL1-202ENST00000355485 CLASRPQ8N2M8 674 aaKnown RBP9.18□□□□□ -0.94
VANGL1-202ENST00000355485 CDK5RAP3Q96JB5 506 aa9.18□□□□□ -0.94
VANGL1-202ENST00000355485 SFPQP23246 707 aaKnown RBP eCLIP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 147.9 ms